RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 PPP2R5CQ13362 524 aa22.89■■□□□ 1.25
GTF3A-202ENST00000419181 PPP2R2DQ66LE6 453 aa22.89■■□□□ 1.25
GTF3A-202ENST00000419181 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.89■■□□□ 1.251e-6■■■■□ 21.8
GTF3A-202ENST00000419181 TRMT1LQ7Z2T5 733 aaKnown RBP22.89■■□□□ 1.25
GTF3A-202ENST00000419181 NME8Q8N427 588 aa22.89■■□□□ 1.25
GTF3A-202ENST00000419181 CEP131Q9UPN4 1083 aa22.89■■□□□ 1.25
GTF3A-202ENST00000419181 KIF28PB7ZC32 967 aa22.88■■□□□ 1.25
GTF3A-202ENST00000419181 GJB5O95377 273 aa22.88■■□□□ 1.25
GTF3A-202ENST00000419181 CD2BP2O95400 341 aaKnown RBP22.88■■□□□ 1.25
GTF3A-202ENST00000419181 TMEM62Q0P6H9 643 aa22.88■■□□□ 1.25
GTF3A-202ENST00000419181 KIAA0319LQ8IZA0 1049 aa22.88■■□□□ 1.25
GTF3A-202ENST00000419181 TRPV2Q9Y5S1 764 aa22.88■■□□□ 1.25
GTF3A-202ENST00000419181 KDM3AQ9Y4C1 1321 aa22.87■■□□□ 1.25
GTF3A-202ENST00000419181 M0QZ92 97 aa22.87■■□□□ 1.25
GTF3A-202ENST00000419181 TLL1O43897 1013 aa22.87■■□□□ 1.25
GTF3A-202ENST00000419181 AMHP03971 560 aa22.87■■□□□ 1.25
GTF3A-202ENST00000419181 SAFBQ15424 915 aaKnown RBP eCLIP22.87■■□□□ 1.25
GTF3A-202ENST00000419181 TSHZ1Q6ZSZ6 1077 aa22.87■■□□□ 1.25
GTF3A-202ENST00000419181 FBXO18Q8NFZ0 1043 aa22.87■■□□□ 1.25
GTF3A-202ENST00000419181 NRBP2Q9NSY0 501 aa22.87■■□□□ 1.25
GTF3A-202ENST00000419181 SQORQ9Y6N5 450 aa22.87■■□□□ 1.25
GTF3A-202ENST00000419181 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.86■■□□□ 1.25
GTF3A-202ENST00000419181 EML1O00423 815 aa22.86■■□□□ 1.25
GTF3A-202ENST00000419181 WNT7AO00755 349 aa22.86■■□□□ 1.25
GTF3A-202ENST00000419181 SLFN12Q8IYM2 578 aa22.86■■□□□ 1.25
GTF3A-202ENST00000419181 FAM184AQ8NB25 1140 aa22.86■■□□□ 1.25
GTF3A-202ENST00000419181 MAFAQ8NHW3 353 aaPredicted RBP22.86■■□□□ 1.25
GTF3A-202ENST00000419181 CELF4Q9BZC1 486 aaKnown RBP22.86■■□□□ 1.25
GTF3A-202ENST00000419181 AGO3Q9H9G7 860 aaKnown RBP22.86■■□□□ 1.25
GTF3A-202ENST00000419181 MAGEB2O15479 319 aa22.85■■□□□ 1.25
GTF3A-202ENST00000419181 ARHGEF15O94989 841 aa22.85■■□□□ 1.25
GTF3A-202ENST00000419181 STBD1O95210 358 aa22.85■■□□□ 1.25
GTF3A-202ENST00000419181 SPIRE1Q08AE8 756 aa22.85■■□□□ 1.25
GTF3A-202ENST00000419181 XKR3Q5GH77 459 aa22.85■■□□□ 1.25
GTF3A-202ENST00000419181 MYOCDQ8IZQ8 938 aa22.85■■□□□ 1.25
GTF3A-202ENST00000419181 LINC01465Q8N7H1 131 aa22.85■■□□□ 1.25
GTF3A-202ENST00000419181 USP38Q8NB14 1042 aa22.85■■□□□ 1.25
GTF3A-202ENST00000419181 TMX3Q96JJ7 454 aa22.85■■□□□ 1.25
GTF3A-202ENST00000419181 ZBED2Q9BTP6 218 aa22.85■■□□□ 1.25
GTF3A-202ENST00000419181 FOXP1Q9H334 677 aaPredicted RBP22.85■■□□□ 1.25
GTF3A-202ENST00000419181 PRDM12Q9H4Q4 367 aa22.85■■□□□ 1.25
GTF3A-202ENST00000419181 EYSQ5T1H1 3165 aa22.85■■□□□ 1.25
GTF3A-202ENST00000419181 MARCH6O60337 910 aa22.84■■□□□ 1.25
GTF3A-202ENST00000419181 CD52P31358 61 aa22.84■■□□□ 1.25
GTF3A-202ENST00000419181 TARBP2Q15633 366 aaKnown RBP22.84■■□□□ 1.25
GTF3A-202ENST00000419181 METTL13Q8N6R0 699 aa22.84■■□□□ 1.25
GTF3A-202ENST00000419181 BANK1Q8NDB2 785 aa22.84■■□□□ 1.25
GTF3A-202ENST00000419181 RAD9AQ99638 391 aa22.84■■□□□ 1.25
GTF3A-202ENST00000419181 NIFKQ9BYG3 293 aaKnown RBP22.84■■□□□ 1.25
GTF3A-202ENST00000419181 LCHNA4D1U4 455 aa22.83■■□□□ 1.25
GTF3A-202ENST00000419181 NEMFO60524 1076 aa22.83■■□□□ 1.25
GTF3A-202ENST00000419181 BAG4O95429 457 aaKnown RBP22.83■■□□□ 1.25
GTF3A-202ENST00000419181 MCM2P49736 904 aa22.83■■□□□ 1.25
GTF3A-202ENST00000419181 PSMC5P62195 406 aa22.83■■□□□ 1.25
GTF3A-202ENST00000419181 TAP1Q03518 808 aa22.83■■□□□ 1.25
GTF3A-202ENST00000419181 CALCRLQ16602 461 aa22.83■■□□□ 1.25
GTF3A-202ENST00000419181 FAM117BQ6P1L5 589 aa22.83■■□□□ 1.25
GTF3A-202ENST00000419181 TOP1MTQ969P6 601 aa22.83■■□□□ 1.25
GTF3A-202ENST00000419181 BACH2Q9BYV9 841 aa22.83■■□□□ 1.25
GTF3A-202ENST00000419181 SEPT9Q9UHD8 586 aaPredicted RBP22.83■■□□□ 1.25
GTF3A-202ENST00000419181 TRANK1O15050 2925 aa22.83■■□□□ 1.24
GTF3A-202ENST00000419181 CLCN3P51790 818 aa22.82■■□□□ 1.24
GTF3A-202ENST00000419181 HTRA4P83105 476 aaPredicted RBP22.82■■□□□ 1.24
GTF3A-202ENST00000419181 EFCAB12Q6NXP0 572 aa22.82■■□□□ 1.24
GTF3A-202ENST00000419181 CEP89Q96ST8 783 aa22.82■■□□□ 1.24
GTF3A-202ENST00000419181 GAS2L1Q99501 681 aaPredicted RBP22.82■■□□□ 1.24
GTF3A-202ENST00000419181 CDHR5Q9HBB8 845 aa22.82■■□□□ 1.24
GTF3A-202ENST00000419181 TMEM150BA6NC51 233 aa22.81■■□□□ 1.24
GTF3A-202ENST00000419181 VTNP04004 478 aa22.81■■□□□ 1.24
GTF3A-202ENST00000419181 QARSP47897 775 aaKnown RBP22.81■■□□□ 1.24
GTF3A-202ENST00000419181 TBC1D8BQ0IIM8 1120 aa22.81■■□□□ 1.24
GTF3A-202ENST00000419181 EPHA7Q15375 998 aa22.81■■□□□ 1.24
GTF3A-202ENST00000419181 ANO5Q75V66 913 aa22.81■■□□□ 1.24
GTF3A-202ENST00000419181 NOSTRINQ8IVI9 506 aa22.81■■□□□ 1.24
GTF3A-202ENST00000419181 LRRC71Q8N4P6 559 aa22.81■■□□□ 1.24
GTF3A-202ENST00000419181 TMEM40Q8WWA1 233 aa22.81■■□□□ 1.24
GTF3A-202ENST00000419181 MTMR9Q96QG7 549 aa22.81■■□□□ 1.24
GTF3A-202ENST00000419181 WRAP73Q9P2S5 460 aaPredicted RBP22.81■■□□□ 1.24
GTF3A-202ENST00000419181 PADI3Q9ULW8 664 aa22.81■■□□□ 1.24
GTF3A-202ENST00000419181 GINS2Q9Y248 185 aa22.81■■□□□ 1.24
GTF3A-202ENST00000419181 INSL6Q9Y581 213 aa22.81■■□□□ 1.24
GTF3A-202ENST00000419181 COL4A6Q14031 1691 aa22.81■■□□□ 1.24
GTF3A-202ENST00000419181 TTC3P53804 2025 aa22.81■■□□□ 1.24
GTF3A-202ENST00000419181 GPR32O75388 356 aa22.8■■□□□ 1.24
GTF3A-202ENST00000419181 P4HBP07237 508 aaKnown RBP22.8■■□□□ 1.24
GTF3A-202ENST00000419181 TMOD1P28289 359 aa22.8■■□□□ 1.24
GTF3A-202ENST00000419181 PAK2Q13177 524 aa22.8■■□□□ 1.24
GTF3A-202ENST00000419181 ADGRE1Q14246 886 aa22.8■■□□□ 1.24
GTF3A-202ENST00000419181 KIZQ2M2Z5 673 aa22.8■■□□□ 1.24
GTF3A-202ENST00000419181 MTERF2Q49AM1 385 aa22.8■■□□□ 1.24
GTF3A-202ENST00000419181 NCAPH2Q6IBW4 605 aa22.8■■□□□ 1.24
GTF3A-202ENST00000419181 LINC01599Q8WXQ3 324 aa22.8■■□□□ 1.24
GTF3A-202ENST00000419181 MAP7D2Q96T17 732 aa22.8■■□□□ 1.24
GTF3A-202ENST00000419181 FTHL17Q9BXU8 183 aa22.8■■□□□ 1.24
GTF3A-202ENST00000419181 PCDHA12Q9UN75 941 aa22.8■■□□□ 1.24
GTF3A-202ENST00000419181 LINC01553A4QN01 128 aa22.79■■□□□ 1.24
GTF3A-202ENST00000419181 DDX11L8A8MPP1 907 aa22.79■■□□□ 1.24
GTF3A-202ENST00000419181 ENPP3O14638 875 aa22.79■■□□□ 1.24
GTF3A-202ENST00000419181 DKC1O60832 514 aaKnown RBP eCLIP22.79■■□□□ 1.24
GTF3A-202ENST00000419181 ATP2B1P20020 1258 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms