RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 SWSAP1Q6NVH7 229 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 TMEM199Q8N511 208 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 CAGE1Q8TC20 777 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 LMBR1Q8WVP7 490 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 ATP6V0A1Q93050 837 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 TATDN2Q93075 761 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 WNT8BQ93098 351 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 UBE2OQ9C0C9 1292 aaKnown RBP11.86□□□□□ -0.51
RFC1-203ENST00000418436 ZNF302Q9NR11 478 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 DISC1Q9NRI5 854 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 TCEAL9Q9UHQ7 104 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 VAV3Q9UKW4 847 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 IGSF9BQ9UPX0 1349 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 MBLAC1A4D2B0 266 aaPredicted RBP11.85□□□□□ -0.51
RFC1-203ENST00000418436 RRN3P2A6NIE6 340 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 C3orf80F5H4A9 247 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 BACH1O14867 736 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 IQCF3P0C7M6 154 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 INSRRP14616 1297 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 CSF2RAP15509 400 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 TRAPPC10P48553 1259 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 SPIRE1Q08AE8 756 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 PPFIA1Q13136 1202 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 PPIGQ13427 754 aaKnown RBP eCLIP11.85□□□□□ -0.51
RFC1-203ENST00000418436 GRIK4Q16099 956 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 MARCH8Q5T0T0 291 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 LARP1BQ659C4 914 aaKnown RBP11.85□□□□□ -0.51
RFC1-203ENST00000418436 PDXDC2PQ6P474 469 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 TRAF7Q6Q0C0 670 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 PADI6Q6TGC4 694 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 C16orf59Q7L2K0 433 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 SLFN12Q8IYM2 578 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 CCDC155Q8N6L0 562 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 ATP8B4Q8TF62 1192 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 TNPO1Q92973 898 aaKnown RBP11.85□□□□□ -0.51
RFC1-203ENST00000418436 VWCEQ96DN2 955 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 MTMR9Q96QG7 549 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 GABBR1Q9UBS5 961 aa11.85□□□□□ -0.51
RFC1-203ENST00000418436 RANBP2P49792 3224 aaKnown RBP11.85□□□□□ -0.51
RFC1-203ENST00000418436 SMAPO00193 183 aa11.84□□□□□ -0.51
RFC1-203ENST00000418436 EML1O00423 815 aa11.84□□□□□ -0.51
RFC1-203ENST00000418436 CHMP2AO43633 222 aa11.84□□□□□ -0.51
RFC1-203ENST00000418436 ZNF862O60290 1169 aa11.84□□□□□ -0.51
RFC1-203ENST00000418436 HBP1O60381 514 aa11.84□□□□□ -0.51
RFC1-203ENST00000418436 NEMFO60524 1076 aa11.84□□□□□ -0.51
RFC1-203ENST00000418436 BAG4O95429 457 aaKnown RBP11.84□□□□□ -0.51
RFC1-203ENST00000418436 CKBP12277 381 aa11.84□□□□□ -0.51
RFC1-203ENST00000418436 TOB1P50616 345 aaPredicted RBP11.84□□□□□ -0.51
RFC1-203ENST00000418436 CCL23P55773 120 aa11.84□□□□□ -0.51
RFC1-203ENST00000418436 GNL2Q13823 731 aaKnown RBP11.84□□□□□ -0.51
RFC1-203ENST00000418436 CALCRLQ16602 461 aa11.84□□□□□ -0.51
RFC1-203ENST00000418436 HABP4Q5JVS0 413 aaKnown RBP11.84□□□□□ -0.51
RFC1-203ENST00000418436 MIER3Q7Z3K6 550 aa11.84□□□□□ -0.51
RFC1-203ENST00000418436 RPAINQ86UA6 219 aa11.84□□□□□ -0.51
RFC1-203ENST00000418436 TDHQ8IZJ6 230 aa11.84□□□□□ -0.51
RFC1-203ENST00000418436 RETREG2Q8NC44 543 aa11.84□□□□□ -0.51
RFC1-203ENST00000418436 LRCH3Q96II8 777 aa11.84□□□□□ -0.51
RFC1-203ENST00000418436 IL23AQ9NPF7 189 aa11.84□□□□□ -0.51
RFC1-203ENST00000418436 SAMM50Q9Y512 469 aa11.84□□□□□ -0.51
RFC1-203ENST00000418436 COL1A2P08123 1366 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 EVPLQ92817 2033 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 ZBTB42B2RXF5 422 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 H3BQV1 296 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 CAND2O75155 1236 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 STBD1O95210 358 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 PARNO95453 639 aaKnown RBP11.83□□□□□ -0.52
RFC1-203ENST00000418436 SELPP16109 830 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 ATP2B1P20020 1258 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 MCM7P33993 719 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 RFC2P35250 354 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 GPNMBQ14956 572 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 SHHQ15465 462 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 UGCGQ16739 394 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 ZNF484Q5JVG2 852 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 TTC38Q5R3I4 469 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 TMEM240Q5SV17 173 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 C9orf50Q5SZB4 431 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 TAF2Q6P1X5 1199 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 LRRC8DQ7L1W4 858 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 C4orf32Q8N8J7 132 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 SCLYQ96I15 445 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 TMEM60Q9H2L4 133 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 TUBE1Q9UJT0 475 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 NOL7Q9UMY1 257 aaKnown RBP11.83□□□□□ -0.52
RFC1-203ENST00000418436 PCDHA12Q9UN75 941 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 SIP14410 1827 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 TET1Q8NFU7 2136 aa11.83□□□□□ -0.52
RFC1-203ENST00000418436 MARCH6O60337 910 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 PFKMP08237 780 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 PDCP20941 246 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 THPOP40225 353 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 PTGDRQ13258 359 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 EPHA7Q15375 998 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 ZNF174Q15697 407 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 FAM26DQ5JW98 314 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 ZNF618Q5T7W0 954 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 RASIP1Q5U651 963 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 MCTP1Q6DN14 999 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 MTHFD1LQ6UB35 978 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 RUFY4Q6ZNE9 571 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms