RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 FUT2Q10981 343 aa20.53■□□□□ 0.88
VCP-202ENST00000417448 ERMP1Q7Z2K6 904 aa20.53■□□□□ 0.88
VCP-202ENST00000417448 FCHSD1Q86WN1 690 aa20.53■□□□□ 0.88
VCP-202ENST00000417448 FBXL16Q8N461 479 aa20.53■□□□□ 0.88
VCP-202ENST00000417448 RRP36Q96EU6 259 aaKnown RBP20.53■□□□□ 0.88
VCP-202ENST00000417448 INPP4AQ96PE3 977 aaPredicted RBP20.53■□□□□ 0.88
VCP-202ENST00000417448 LZTS2Q9BRK4 669 aa20.53■□□□□ 0.88
VCP-202ENST00000417448 TLE6Q9H808 572 aa20.53■□□□□ 0.88
VCP-202ENST00000417448 ZNF215Q9UL58 517 aaPredicted RBP20.53■□□□□ 0.88
VCP-202ENST00000417448 CNTNAP5Q8WYK1 1306 aa20.53■□□□□ 0.88
VCP-202ENST00000417448 SPATA31C2B4DYI2 1134 aa20.52■□□□□ 0.88
VCP-202ENST00000417448 CD52P31358 61 aa20.52■□□□□ 0.88
VCP-202ENST00000417448 NUBP1P53384 320 aa20.52■□□□□ 0.88
VCP-202ENST00000417448 TAF2Q6P1X5 1199 aa20.52■□□□□ 0.88
VCP-202ENST00000417448 TSHZ1Q6ZSZ6 1077 aa20.52■□□□□ 0.88
VCP-202ENST00000417448 TMEM105Q8N8V8 129 aa20.52■□□□□ 0.88
VCP-202ENST00000417448 DNAJB3Q8WWF6 145 aa20.52■□□□□ 0.88
VCP-202ENST00000417448 BACH2Q9BYV9 841 aa20.52■□□□□ 0.88
VCP-202ENST00000417448 RBM28Q9NW13 759 aaKnown RBP20.52■□□□□ 0.88
VCP-202ENST00000417448 TPCN1Q9ULQ1 816 aa20.52■□□□□ 0.88
VCP-202ENST00000417448 CDY2AQ9Y6F7 541 aa20.52■□□□□ 0.88
VCP-202ENST00000417448 V9GY48 417 aaPredicted RBP20.52■□□□□ 0.88
VCP-202ENST00000417448 LARGE1O95461 756 aa20.51■□□□□ 0.87
VCP-202ENST00000417448 SP100P23497 879 aaPredicted RBP20.51■□□□□ 0.87
VCP-202ENST00000417448 SP4Q02446 784 aa20.51■□□□□ 0.87
VCP-202ENST00000417448 NEDD9Q14511 834 aa20.51■□□□□ 0.87
VCP-202ENST00000417448 NPAS4Q8IUM7 802 aa20.51■□□□□ 0.87
VCP-202ENST00000417448 PHKBQ93100 1093 aa20.51■□□□□ 0.87
VCP-202ENST00000417448 S1PR5Q9H228 398 aa20.51■□□□□ 0.87
VCP-202ENST00000417448 FRMPD4Q14CM0 1322 aa20.51■□□□□ 0.87
VCP-202ENST00000417448 EVCP57679 992 aa20.5■□□□□ 0.87
VCP-202ENST00000417448 DUSP6Q16828 381 aa20.5■□□□□ 0.87
VCP-202ENST00000417448 GNPTABQ3T906 1256 aa20.5■□□□□ 0.87
VCP-202ENST00000417448 MARCH8Q5T0T0 291 aa20.5■□□□□ 0.87
VCP-202ENST00000417448 SAMD3Q8N6K7 520 aa20.5■□□□□ 0.87
VCP-202ENST00000417448 ZBTB10Q96DT7 871 aa20.5■□□□□ 0.87
VCP-202ENST00000417448 RTEL1Q9NZ71 1219 aa20.5■□□□□ 0.87
VCP-202ENST00000417448 GCOM1H8Y6P7 765 aaPredicted RBP20.49■□□□□ 0.87
VCP-202ENST00000417448 POLR2MP0CAP2 368 aa20.49■□□□□ 0.87
VCP-202ENST00000417448 SMARCA1P28370 1054 aa20.49■□□□□ 0.87
VCP-202ENST00000417448 PPFIA1Q13136 1202 aa20.49■□□□□ 0.87
VCP-202ENST00000417448 KCNC3Q14003 757 aa20.49■□□□□ 0.87
VCP-202ENST00000417448 NECAB1Q8N987 351 aa20.49■□□□□ 0.87
VCP-202ENST00000417448 SMOC2Q9H3U7 446 aa20.49■□□□□ 0.87
VCP-202ENST00000417448 SEC63Q9UGP8 760 aaKnown RBP20.49■□□□□ 0.87
VCP-202ENST00000417448 CDH22Q9UJ99 828 aa20.49■□□□□ 0.87
VCP-202ENST00000417448 TUBE1Q9UJT0 475 aa20.49■□□□□ 0.87
VCP-202ENST00000417448 MBLAC1A4D2B0 266 aaPredicted RBP20.48■□□□□ 0.87
VCP-202ENST00000417448 FIBPO43427 364 aa20.48■□□□□ 0.87
VCP-202ENST00000417448 ID4P47928 161 aa20.48■□□□□ 0.87
VCP-202ENST00000417448 RBM25P49756 843 aaKnown RBP20.48■□□□□ 0.87
VCP-202ENST00000417448 ERVFC1P60507 584 aa20.48■□□□□ 0.87
VCP-202ENST00000417448 NTRK3Q16288 839 aa20.48■□□□□ 0.87
VCP-202ENST00000417448 HEATR3Q7Z4Q2 680 aa20.48■□□□□ 0.87
VCP-202ENST00000417448 FRMD5Q7Z6J6 570 aa20.48■□□□□ 0.87
VCP-202ENST00000417448 ZBTB33Q86T24 672 aa20.48■□□□□ 0.87
VCP-202ENST00000417448 KREMEN2Q8NCW0 462 aa20.48■□□□□ 0.87
VCP-202ENST00000417448 MICAL1Q8TDZ2 1067 aa20.48■□□□□ 0.87
VCP-202ENST00000417448 ZNF274Q96GC6 653 aaPredicted RBP20.48■□□□□ 0.87
VCP-202ENST00000417448 APOL5Q9BWW9 433 aa20.48■□□□□ 0.87
VCP-202ENST00000417448 BRD1O95696 1058 aa20.47■□□□□ 0.87
VCP-202ENST00000417448 MARK3P27448 753 aa20.47■□□□□ 0.87
VCP-202ENST00000417448 MRPS6P82932 125 aaKnown RBP20.47■□□□□ 0.87
VCP-202ENST00000417448 GRIK4Q16099 956 aa20.47■□□□□ 0.87
VCP-202ENST00000417448 WWC2Q6AWC2 1192 aa20.47■□□□□ 0.87
VCP-202ENST00000417448 SYCE2Q6PIF2 218 aa20.47■□□□□ 0.87
VCP-202ENST00000417448 RSPH3Q86UC2 560 aa20.47■□□□□ 0.87
VCP-202ENST00000417448 SLC26A6Q9BXS9 759 aa20.47■□□□□ 0.87
VCP-202ENST00000417448 HCSTQ9UBK5 93 aa20.47■□□□□ 0.87
VCP-202ENST00000417448 NID2Q14112 1375 aa20.46■□□□□ 0.87
VCP-202ENST00000417448 STAM2O75886 525 aa20.46■□□□□ 0.87
VCP-202ENST00000417448 SCG2P13521 617 aa20.46■□□□□ 0.87
VCP-202ENST00000417448 TCF7P36402 384 aaPredicted RBP20.46■□□□□ 0.87
VCP-202ENST00000417448 RCAN1P53805 252 aa20.46■□□□□ 0.87
VCP-202ENST00000417448 SCRN1Q12765 414 aa20.46■□□□□ 0.87
VCP-202ENST00000417448 ME3Q16798 604 aa20.46■□□□□ 0.87
VCP-202ENST00000417448 TYW1BQ6NUM6 668 aa20.46■□□□□ 0.87
VCP-202ENST00000417448 ANKRD54Q6NXT1 300 aa20.46■□□□□ 0.87
VCP-202ENST00000417448 TMEM184AQ6ZMB5 413 aa20.46■□□□□ 0.87
VCP-202ENST00000417448 CDCA3Q99618 268 aaPredicted RBP20.46■□□□□ 0.87
VCP-202ENST00000417448 FTHL17Q9BXU8 183 aa20.46■□□□□ 0.87
VCP-202ENST00000417448 TMX1Q9H3N1 280 aa20.46■□□□□ 0.87
VCP-202ENST00000417448 UPF2Q9HAU5 1272 aaKnown RBP20.46■□□□□ 0.87
VCP-202ENST00000417448 PADI3Q9ULW8 664 aa20.46■□□□□ 0.87
VCP-202ENST00000417448 EP300Q09472 2414 aaPredicted RBP20.46■□□□□ 0.87
VCP-202ENST00000417448 FSCN2O14926 492 aa20.45■□□□□ 0.86
VCP-202ENST00000417448 TECP42680 631 aa20.45■□□□□ 0.86
VCP-202ENST00000417448 UBE3AQ05086 875 aa20.45■□□□□ 0.86
VCP-202ENST00000417448 TMEM62Q0P6H9 643 aa20.45■□□□□ 0.86
VCP-202ENST00000417448 USP17L6PQ6QN14 398 aa20.45■□□□□ 0.86
VCP-202ENST00000417448 TBC1D32Q96NH3 1257 aa20.45■□□□□ 0.86
VCP-202ENST00000417448 SENP7Q9BQF6 1050 aa20.45■□□□□ 0.86
VCP-202ENST00000417448 FAM49AQ9H0Q0 323 aaPredicted RBP20.45■□□□□ 0.86
VCP-202ENST00000417448 SLKQ9H2G2 1235 aaPredicted RBP20.45■□□□□ 0.86
VCP-202ENST00000417448 SORCS3Q9UPU3 1222 aa20.45■□□□□ 0.86
VCP-202ENST00000417448 FRYLO94915 3013 aa20.45■□□□□ 0.86
VCP-202ENST00000417448 CCDC196A0A1B0GTZ2 297 aa20.44■□□□□ 0.86
VCP-202ENST00000417448 ADAMTS3O15072 1205 aa20.44■□□□□ 0.86
VCP-202ENST00000417448 FGF18O76093 207 aa20.44■□□□□ 0.86
VCP-202ENST00000417448 STAG3L1P0CL83 205 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms