RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 TANC1Q9C0D5 1861 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 ABHD14A-ACY1A0A1B0GW23 586 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 RBAK-RBAKDNI3L0D1 243 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 K7ELQ4 463 aaPredicted RBP12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 WNT7AO00755 349 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 MAGEB2O15479 319 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 ZNF862O60290 1169 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 EFCAB14O75071 495 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 CHRNA1P02708 482 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 CXCL10P02778 98 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 OR52Z1P0C646 297 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 DNAJB2P25686 324 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 PBX2P40425 430 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 CLCN3P51790 818 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 CTTNQ14247 550 aaKnown RBP12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 NBR1Q14596 966 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 EPHA7Q15375 998 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 TMEM266Q2M3C6 531 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 EFCAB12Q6NXP0 572 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 TRAF7Q6Q0C0 670 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 MYOCDQ8IZQ8 938 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 NME8Q8N427 588 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 LRRC71Q8N4P6 559 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 DYDC2Q96IM9 177 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 SLC9A7Q96T83 725 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 SH2D3AQ9BRG2 576 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 LXNQ9BS40 222 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 RGL1Q9NZL6 768 aa12.4□□□□□ -0.42
TM9SF4-203ENST00000417389 TMEM150BA6NC51 233 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 C22orf31O95567 290 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 AMHP03971 560 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 VTNP04004 478 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 PDCP20941 246 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 U2AF2P26368 475 aaKnown RBP eCLIP12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 TECP42680 631 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 TRAPPC10P48553 1259 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 DNM2P50570 870 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 WDR5P61964 334 aaKnown RBP12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 PAK2Q13177 524 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 GPNMBQ14956 572 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 KIZQ2M2Z5 673 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 PLEKHG4Q58EX7 1191 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 FAM26DQ5JW98 314 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 RASIP1Q5U651 963 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 PLA2G4FQ68DD2 849 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 GPR153Q6NV75 609 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 OTUD6AQ7L8S5 288 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 RPAINQ86UA6 219 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 APBB2Q92870 758 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 VWCEQ96DN2 955 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 CEP170P1Q96L14 293 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 PBX4Q9BYU1 374 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 CELF4Q9BZC1 486 aaKnown RBP12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 TMEM60Q9H2L4 133 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 NKX2-4Q9H2Z4 354 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 ZSWIM4Q9H7M6 989 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 SLC28A3Q9HAS3 691 aa12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 BMP2KQ9NSY1 1161 aaPredicted RBP12.39□□□□□ -0.43
TM9SF4-203ENST00000417389 POTEMA6NI47 508 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 ZBTB42B2RXF5 422 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 TLL1O43897 1013 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 UPP2O95045 317 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 CD52P31358 61 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 POLGP54098 1239 aaPredicted RBP12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 DEFB103AP81534 67 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 MGAT3Q09327 533 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 NFX1Q12986 1120 aaKnown RBP12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 ORC2Q13416 577 aaPredicted RBP12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 LPIN1Q14693 890 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 XKR9Q5GH70 373 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 FBXO47Q5MNV8 452 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 PPP2R2DQ66LE6 453 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 B3GNT9Q6UX72 402 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 TSHZ1Q6ZSZ6 1077 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 TMCO2Q7Z6W1 182 aaPredicted RBP12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 HERC6Q8IVU3 1022 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 KIAA0319LQ8IZA0 1049 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 ERMNQ8TAM6 284 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 PHOSPHO2Q8TCD6 241 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 NLRP7Q8WX94 980 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 SLC7A3Q8WY07 619 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 ZNF668Q96K58 619 aaPredicted RBP12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 MTMR9Q96QG7 549 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 EIF2AK1Q9BQI3 630 aaKnown RBP12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 OSBPL7Q9BZF2 842 aa12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 MYH9P35579 1960 aaKnown RBP12.38□□□□□ -0.43
TM9SF4-203ENST00000417389 RPS6KA5O75582 802 aa12.37□□□□□ -0.43
TM9SF4-203ENST00000417389 MYOGP15173 224 aa12.37□□□□□ -0.43
TM9SF4-203ENST00000417389 YWHABP31946 246 aaKnown RBP12.37□□□□□ -0.43
TM9SF4-203ENST00000417389 NPEPPSP55786 919 aa12.37□□□□□ -0.43
TM9SF4-203ENST00000417389 NLRP11P59045 1033 aaKnown RBP12.37□□□□□ -0.43
TM9SF4-203ENST00000417389 CUL4AQ13619 759 aa12.37□□□□□ -0.43
TM9SF4-203ENST00000417389 TCTN1Q2MV58 587 aa12.37□□□□□ -0.43
TM9SF4-203ENST00000417389 RILPL1Q5EBL4 403 aa12.37□□□□□ -0.43
TM9SF4-203ENST00000417389 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.37□□□□□ -0.43
TM9SF4-203ENST00000417389 FERMT3Q86UX7 667 aa12.37□□□□□ -0.43
TM9SF4-203ENST00000417389 USP38Q8NB14 1042 aa12.37□□□□□ -0.43
TM9SF4-203ENST00000417389 NEK9Q8TD19 979 aa12.37□□□□□ -0.43
TM9SF4-203ENST00000417389 OSMRQ99650 979 aa12.37□□□□□ -0.43
TM9SF4-203ENST00000417389 JPH2Q9BR39 696 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms