RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 TBC1D8BQ0IIM8 1120 aa25.84■■□□□ 1.73
SMARCB1-205ENST00000417137 TARBP2Q15633 366 aaKnown RBP25.84■■□□□ 1.73
SMARCB1-205ENST00000417137 MTERF2Q49AM1 385 aa25.84■■□□□ 1.73
SMARCB1-205ENST00000417137 IER5Q5VY09 327 aa25.84■■□□□ 1.73
SMARCB1-205ENST00000417137 ANO5Q75V66 913 aa25.84■■□□□ 1.73
SMARCB1-205ENST00000417137 METTL13Q8N6R0 699 aa25.84■■□□□ 1.73
SMARCB1-205ENST00000417137 IGSF22Q8N9C0 903 aa25.84■■□□□ 1.73
SMARCB1-205ENST00000417137 ZNF396Q96N95 335 aaPredicted RBP25.84■■□□□ 1.73
SMARCB1-205ENST00000417137 JPH2Q9BR39 696 aaPredicted RBP25.84■■□□□ 1.73
SMARCB1-205ENST00000417137 FAM49AQ9H0Q0 323 aaPredicted RBP25.84■■□□□ 1.73
SMARCB1-205ENST00000417137 M0QZ92 97 aa25.83■■□□□ 1.73
SMARCB1-205ENST00000417137 XRCC6P12956 609 aaKnown RBP eCLIP25.83■■□□□ 1.73
SMARCB1-205ENST00000417137 MUTP22033 750 aa25.83■■□□□ 1.73
SMARCB1-205ENST00000417137 RPA1P27694 616 aa25.83■■□□□ 1.73
SMARCB1-205ENST00000417137 FAM26DQ5JW98 314 aa25.83■■□□□ 1.73
SMARCB1-205ENST00000417137 PSRC1Q6PGN9 363 aaPredicted RBP25.83■■□□□ 1.73
SMARCB1-205ENST00000417137 CATSPER3Q86XQ3 398 aa25.83■■□□□ 1.73
SMARCB1-205ENST00000417137 CEP170P1Q96L14 293 aa25.83■■□□□ 1.73
SMARCB1-205ENST00000417137 CYP26B1Q9NR63 512 aa25.83■■□□□ 1.73
SMARCB1-205ENST00000417137 WRAP73Q9P2S5 460 aaPredicted RBP25.83■■□□□ 1.73
SMARCB1-205ENST00000417137 KAT6AQ92794 2004 aa25.82■■□□□ 1.72
SMARCB1-205ENST00000417137 KRT79Q5XKE5 535 aa25.82■■□□□ 1.72
SMARCB1-205ENST00000417137 EFCAB12Q6NXP0 572 aa25.82■■□□□ 1.72
SMARCB1-205ENST00000417137 FAM173BQ6P4H8 233 aa25.82■■□□□ 1.72
SMARCB1-205ENST00000417137 DEFB128Q7Z7B8 93 aa25.82■■□□□ 1.72
SMARCB1-205ENST00000417137 ZBTB10Q96DT7 871 aa25.82■■□□□ 1.72
SMARCB1-205ENST00000417137 FTOQ9C0B1 505 aaKnown RBP eCLIP25.82■■□□□ 1.72
SMARCB1-205ENST00000417137 ANKEF1Q9NU02 776 aa25.82■■□□□ 1.72
SMARCB1-205ENST00000417137 MYH9P35579 1960 aaKnown RBP25.82■■□□□ 1.72
SMARCB1-205ENST00000417137 VWA3AA6NCI4 1184 aa25.81■■□□□ 1.72
SMARCB1-205ENST00000417137 F13A1P00488 732 aa25.81■■□□□ 1.72
SMARCB1-205ENST00000417137 FGBP02675 491 aa25.81■■□□□ 1.72
SMARCB1-205ENST00000417137 CTSHP09668 335 aa25.81■■□□□ 1.72
SMARCB1-205ENST00000417137 SPATA31C1P0DKV0 1188 aa25.81■■□□□ 1.72
SMARCB1-205ENST00000417137 CCT6AP40227 531 aaKnown RBP25.81■■□□□ 1.72
SMARCB1-205ENST00000417137 DNM2P50570 870 aa25.81■■□□□ 1.72
SMARCB1-205ENST00000417137 IL17AQ16552 155 aa25.81■■□□□ 1.72
SMARCB1-205ENST00000417137 FOXD4L5Q5VV16 416 aaPredicted RBP25.81■■□□□ 1.72
SMARCB1-205ENST00000417137 TDHQ8IZJ6 230 aa25.81■■□□□ 1.72
SMARCB1-205ENST00000417137 ZNF710Q8N1W2 664 aa25.81■■□□□ 1.72
SMARCB1-205ENST00000417137 FOXD4L4Q8WXT5 416 aaPredicted RBP25.81■■□□□ 1.72
SMARCB1-205ENST00000417137 CCDC43Q96MW1 224 aaKnown RBP25.81■■□□□ 1.72
SMARCB1-205ENST00000417137 NACC1Q96RE7 527 aa25.81■■□□□ 1.72
SMARCB1-205ENST00000417137 SUGCTQ9HAC7 445 aa25.81■■□□□ 1.72
SMARCB1-205ENST00000417137 CLIC4Q9Y696 253 aa25.81■■□□□ 1.72
SMARCB1-205ENST00000417137 LTBP2Q14767 1821 aa25.8■■□□□ 1.72
SMARCB1-205ENST00000417137 MED24O75448 989 aa25.8■■□□□ 1.72
SMARCB1-205ENST00000417137 ACRP10323 421 aa25.8■■□□□ 1.72
SMARCB1-205ENST00000417137 ACTN1P12814 892 aa25.8■■□□□ 1.72
SMARCB1-205ENST00000417137 EPHB4P54760 987 aa25.8■■□□□ 1.72
SMARCB1-205ENST00000417137 MRPS6P82932 125 aaKnown RBP25.8■■□□□ 1.72
SMARCB1-205ENST00000417137 XKR9Q5GH70 373 aa25.8■■□□□ 1.72
SMARCB1-205ENST00000417137 PLA2G4FQ68DD2 849 aa25.8■■□□□ 1.72
SMARCB1-205ENST00000417137 TRAF7Q6Q0C0 670 aa25.8■■□□□ 1.72
SMARCB1-205ENST00000417137 ZNF365Q70YC5 407 aa25.8■■□□□ 1.72
SMARCB1-205ENST00000417137 KIAA0319LQ8IZA0 1049 aa25.8■■□□□ 1.72
SMARCB1-205ENST00000417137 SLC7A3Q8WY07 619 aa25.8■■□□□ 1.72
SMARCB1-205ENST00000417137 AK8Q96MA6 479 aa25.8■■□□□ 1.72
SMARCB1-205ENST00000417137 MAP7D2Q96T17 732 aa25.8■■□□□ 1.72
SMARCB1-205ENST00000417137 MTIF3Q9H2K0 278 aaKnown RBP25.8■■□□□ 1.72
SMARCB1-205ENST00000417137 DAXXQ9UER7 740 aaPredicted RBP25.8■■□□□ 1.72
SMARCB1-205ENST00000417137 TMEM150BA6NC51 233 aa25.79■■□□□ 1.72
SMARCB1-205ENST00000417137 RFC5P40937 340 aa25.79■■□□□ 1.72
SMARCB1-205ENST00000417137 NPEPPSP55786 919 aa25.79■■□□□ 1.72
SMARCB1-205ENST00000417137 TMEM240Q5SV17 173 aa25.79■■□□□ 1.72
SMARCB1-205ENST00000417137 C16orf59Q7L2K0 433 aa25.79■■□□□ 1.72
SMARCB1-205ENST00000417137 SNX29Q8TEQ0 813 aa25.79■■□□□ 1.72
SMARCB1-205ENST00000417137 NBNO60934 754 aa25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 MAFO75444 373 aaPredicted RBP25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 CHRNA1P02708 482 aa25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 CXCL10P02778 98 aa25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 LONP1P36776 959 aaKnown RBP25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 POLGP54098 1239 aaPredicted RBP25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 CDC42EP1Q00587 391 aa25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 CEBPZQ03701 1054 aaKnown RBP25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 PTPAQ15257 358 aa25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 SHHQ15465 462 aa25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 ATL3Q6DD88 541 aa25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 CEP89Q96ST8 783 aa25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 SH2D3AQ9BRG2 576 aa25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 TRPV2Q9Y5S1 764 aa25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 CDY2AQ9Y6F7 541 aa25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 TRIP12Q14669 1992 aaPredicted RBP25.78■■□□□ 1.72
SMARCB1-205ENST00000417137 ZBTB39O15060 712 aa25.77■■□□□ 1.72
SMARCB1-205ENST00000417137 ANP32AP39687 249 aaKnown RBP25.77■■□□□ 1.72
SMARCB1-205ENST00000417137 CLCN3P51790 818 aa25.77■■□□□ 1.72
SMARCB1-205ENST00000417137 PKP1Q13835 747 aa25.77■■□□□ 1.72
SMARCB1-205ENST00000417137 LRRC71Q8N4P6 559 aa25.77■■□□□ 1.72
SMARCB1-205ENST00000417137 PIGOQ8TEQ8 1089 aa25.77■■□□□ 1.72
SMARCB1-205ENST00000417137 USP28Q96RU2 1077 aa25.77■■□□□ 1.72
SMARCB1-205ENST00000417137 CELF4Q9BZC1 486 aaKnown RBP25.77■■□□□ 1.72
SMARCB1-205ENST00000417137 DBR1Q9UK59 544 aaKnown RBP25.77■■□□□ 1.72
SMARCB1-205ENST00000417137 AKT3Q9Y243 479 aa25.77■■□□□ 1.72
SMARCB1-205ENST00000417137 MORC2Q9Y6X9 1032 aaPredicted RBP25.77■■□□□ 1.72
SMARCB1-205ENST00000417137 IGKV6-21A0A0C4DH24 114 aa25.76■■□□□ 1.71
SMARCB1-205ENST00000417137 GAS2O43903 313 aaKnown RBP25.76■■□□□ 1.71
SMARCB1-205ENST00000417137 BRD1O95696 1058 aa25.76■■□□□ 1.71
SMARCB1-205ENST00000417137 MGAT3Q09327 533 aa25.76■■□□□ 1.71
SMARCB1-205ENST00000417137 TMEM62Q0P6H9 643 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms