RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 AHCYL1O43865 530 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 HIP1RO75146 1068 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 LGR5O75473 907 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 SERPING1P05155 500 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 FESP07332 822 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 PRPHP41219 470 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 IFI16Q16666 785 aaKnown RBP15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 RC3H1Q5TC82 1133 aaKnown RBP15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 SOGA3Q5TF21 947 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 METTL13Q8N6R0 699 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 C4orf32Q8N8J7 132 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 SCFD2Q8WU76 684 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 TEKT4Q8WW24 435 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 TLCD1Q96CP7 247 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 TCP11L1Q9NUJ3 509 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 TMEM59LQ9UK28 342 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 SPDYE3A6NKU9 549 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 MAP3K13O43283 966 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 PLTPP55058 493 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 DENND2CQ68D51 928 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 BLIDQ8IZY5 108 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 ATRNO75882 1429 aa15.98■□□□□ 0.15
NCKIPSD-204ENST00000416649 MYH1P12882 1939 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 PYGLP06737 847 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 TUBP50607 506 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 COPS2P61201 443 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 SLC18A3Q16572 532 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 TXNRD1Q16881 649 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 CWF19L1Q69YN2 538 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 CNNM4Q6P4Q7 775 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 OTUD6AQ7L8S5 288 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 KCNMB3Q9NPA1 279 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 CNTNAP5Q8WYK1 1306 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 A6NHS1 94 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 H0Y3Z8 333 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 POLE2P56282 527 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 TROAPQ12815 778 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 LAMB3Q13751 1172 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 PPP2R5BQ15173 497 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 PEX26Q7Z412 305 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 IFT74Q96LB3 600 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 ZMYND8Q9ULU4 1186 aaPredicted RBP15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 ATP6V0A2Q9Y487 856 aa15.97■□□□□ 0.15
NCKIPSD-204ENST00000416649 FERP16591 822 aa15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 RANBP1P43487 201 aa15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 RNASELQ05823 741 aaKnown RBP15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 KCNMA1Q12791 1236 aa15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 NUGGCQ68CJ6 796 aa15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 PRR5LQ6MZQ0 368 aa15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 CENPTQ96BT3 561 aa15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.96■□□□□ 0.152e-6■■■■■ 29.4
NCKIPSD-204ENST00000416649 ZMYND12Q9H0C1 365 aa15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 TCP11X1B4DZS4 312 aa15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 SNX3O60493 162 aa15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 ALADP13716 330 aa15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 HIBADHP31937 336 aaKnown RBP15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 RPUSD2Q8IZ73 545 aaKnown RBP15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 PROM2Q8N271 834 aa15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 ZNF512BQ96KM6 892 aaPredicted RBP15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 DBR1Q9UK59 544 aaKnown RBP15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 USP15Q9Y4E8 981 aaPredicted RBP15.96■□□□□ 0.15
NCKIPSD-204ENST00000416649 A0A1B0GVG6 124 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 SERPINB2P05120 415 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 GYS1P13807 737 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 TM4SF1P30408 202 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 USP11P51784 963 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 RCAN1P53805 252 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 RAD23BP54727 409 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 EIF3BP55884 814 aaKnown RBP15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 SLC29A2Q14542 456 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 LMNTD2Q8IXW0 634 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 ANKRD42Q8N9B4 389 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 NEK9Q8TD19 979 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 EPS8L3Q8TE67 593 aaKnown RBP15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 RPGRQ92834 1020 aaKnown RBP15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 PBKQ96KB5 322 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 ADAM7Q9H2U9 754 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 ZNF804BA4D1E1 1349 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 RTN3O95197 1032 aaPredicted RBP15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 APBA3O96018 575 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 MMP13P45452 471 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 PDE6CP51160 858 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 LONP2Q86WA8 852 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 GLIS3Q8NEA6 775 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 FBF1Q8TES7 1133 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 ZNF384Q8TF68 577 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 ITFG2Q969R8 447 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 RAB17Q9H0T7 212 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 ETNK1Q9HBU6 452 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 NKX1-2Q9UD57 310 aaPredicted RBP15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 C2CD2Q9Y426 696 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 MAGEB6P1A0A0J9YX57 407 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 CCDC169A6NNP5 214 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 SUN1O94901 812 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 MYL1P05976 194 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 TECP42680 631 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 UBE4AQ14139 1066 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 PDCD2Q16342 344 aaPredicted RBP15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 UBAP2Q5T6F2 1119 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms