RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 LRRN2O75325 713 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 TROVE2P10155 538 aaKnown RBP eCLIP16.88■□□□□ 0.29
PHRF1-203ENST00000416188 GBP1P32455 592 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 VCX3BQ9H321 246 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 ALDH1A1P00352 501 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 ANXA13P27216 316 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 PHBP35232 272 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 PSMC2P35998 433 aaKnown RBP16.88■□□□□ 0.29
PHRF1-203ENST00000416188 LMNTD2Q8IXW0 634 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 BZW2Q9Y6E2 419 aaKnown RBP16.88■□□□□ 0.29
PHRF1-203ENST00000416188 RFX7Q2KHR2 1363 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 A0A1B0GUA9 196 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 MFAP3P55082 362 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 RESTQ13127 1097 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 MAN2A1Q16706 1144 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 SBK1Q52WX2 424 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 RHPN2Q8IUC4 686 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 GSDMBQ8TAX9 411 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 PPP2R3BQ9Y5P8 575 aa16.88■□□□□ 0.29
PHRF1-203ENST00000416188 FAM149B1Q96BN6 582 aa16.87■□□□□ 0.29
PHRF1-203ENST00000416188 ATF2P15336 505 aa16.87■□□□□ 0.29
PHRF1-203ENST00000416188 LLGL1Q15334 1064 aa16.87■□□□□ 0.29
PHRF1-203ENST00000416188 ZNF512BQ96KM6 892 aaPredicted RBP16.87■□□□□ 0.29
PHRF1-203ENST00000416188 TMEM260Q9NX78 707 aa16.87■□□□□ 0.29
PHRF1-203ENST00000416188 SEPT10Q9P0V9 454 aa16.87■□□□□ 0.29
PHRF1-203ENST00000416188 STK38LQ9Y2H1 464 aa16.87■□□□□ 0.29
PHRF1-203ENST00000416188 PCDHB4Q9Y5E5 795 aa16.87■□□□□ 0.29
PHRF1-203ENST00000416188 IPO5O00410 1097 aaKnown RBP16.87■□□□□ 0.29
PHRF1-203ENST00000416188 AFPP02771 609 aaKnown RBP16.87■□□□□ 0.29
PHRF1-203ENST00000416188 GCOM2Q9BZD3 368 aaPredicted RBP16.87■□□□□ 0.29
PHRF1-203ENST00000416188 LY9Q9HBG7 655 aa16.87■□□□□ 0.29
PHRF1-203ENST00000416188 ATP8B3O60423 1300 aa16.87■□□□□ 0.29
PHRF1-203ENST00000416188 KIF28PB7ZC32 967 aa16.87■□□□□ 0.29
PHRF1-203ENST00000416188 RGS2P41220 211 aa16.87■□□□□ 0.29
PHRF1-203ENST00000416188 BCAS4Q8TDM0 211 aa16.87■□□□□ 0.29
PHRF1-203ENST00000416188 MAGOHBQ96A72 148 aaKnown RBP16.87■□□□□ 0.29
PHRF1-203ENST00000416188 HAUS1Q96CS2 278 aa16.87■□□□□ 0.29
PHRF1-203ENST00000416188 ZNF668Q96K58 619 aaPredicted RBP16.87■□□□□ 0.29
PHRF1-203ENST00000416188 FAM20AQ96MK3 541 aa16.87■□□□□ 0.29
PHRF1-203ENST00000416188 KLHL14Q9P2G3 628 aa16.87■□□□□ 0.29
PHRF1-203ENST00000416188 CDC25BP30305 580 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 DDIT3P35638 169 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 BPIFB4P59827 614 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 NBPF12Q5TAG4 269 aaPredicted RBP16.86■□□□□ 0.29
PHRF1-203ENST00000416188 NME8Q8N427 588 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 PTPN22Q9Y2R2 807 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 GOLGA8KD6RF30 607 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 GGPS1O95749 300 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 SURF1Q15526 300 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 SLFN12LQ6IEE8 588 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 C16orf86Q6ZW13 317 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 RABGGTAQ92696 567 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 ATG4CQ96DT6 458 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 KATNAL1Q9BW62 490 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 GINM1Q9NU53 330 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 SLC9A2Q9UBY0 812 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 PDE11AQ9HCR9 933 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 GJB4Q9NTQ9 266 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 SRPRBQ9Y5M8 271 aaKnown RBP16.86■□□□□ 0.29
PHRF1-203ENST00000416188 DISP2A7MBM2 1401 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 ZMYND10O75800 440 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 TSNAXIP1Q2TAA8 658 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 KCTD16Q68DU8 428 aa16.86■□□□□ 0.29
PHRF1-203ENST00000416188 MB21D2Q8IYB1 491 aaPredicted RBP16.86■□□□□ 0.29
PHRF1-203ENST00000416188 H7C0C1 242 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 TXNDC9O14530 226 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 PLCG1P19174 1290 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 ATP5OP48047 213 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 ZNF543Q08ER8 600 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 GNASQ5JWF2 1037 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 ENOX1Q8TC92 643 aaKnown RBP16.85■□□□□ 0.29
PHRF1-203ENST00000416188 ZDHHC15Q96MV8 337 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 MTRQ99707 1265 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 CAPS2Q9BXY5 557 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 TYW1Q9NV66 732 aaKnown RBP16.85■□□□□ 0.29
PHRF1-203ENST00000416188 PASKQ96RG2 1323 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 GH1P01241 217 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 RNF180Q86T96 592 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 STAG2Q8N3U4 1231 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 ACRBPQ8NEB7 543 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 MAD1L1Q9Y6D9 718 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 RGL2O15211 777 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 QARSP47897 775 aaKnown RBP16.85■□□□□ 0.29
PHRF1-203ENST00000416188 PPP2R3CQ969Q6 453 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 PRR12Q9ULL5 1215 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 ITKQ08881 620 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 PTF1AQ7RTS3 328 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 ZNF653Q96CK0 615 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 OPTNQ96CV9 577 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 NUF2Q9BZD4 464 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 VPS33BQ9H267 617 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 REREQ9P2R6 1566 aa16.85■□□□□ 0.29
PHRF1-203ENST00000416188 ZWINTO95229 277 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 CAP2P40123 477 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 USP50Q70EL3 339 aaPredicted RBP16.84■□□□□ 0.29
PHRF1-203ENST00000416188 GLT1D1Q96MS3 346 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 PIDD1Q9HB75 910 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 EMILIN3Q9NT22 766 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 LRRC4BQ9NT99 713 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 PFASO15067 1338 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms