RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 NUDT11Q96G61 164 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 TMEM169Q96HH4 297 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 AJUBAQ96IF1 538 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 LRRC37BQ96QE4 947 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 CAMKK2Q96RR4 588 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 APBA2Q99767 749 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 PDGFDQ9GZP0 370 aaPredicted RBP3.84□□□□□ -1.79
LINC00428-201ENST00000415620 BCL11AQ9H165 835 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 EFR3BQ9Y2G0 817 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 COA3Q9Y2R0 106 aaPredicted RBP3.84□□□□□ -1.79
LINC00428-201ENST00000415620 PCDHB4Q9Y5E5 795 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 NALCNQ8IZF0 1738 aa3.84□□□□□ -1.8
LINC00428-201ENST00000415620 CHGBP05060 677 aa3.83□□□□□ -1.8
LINC00428-201ENST00000415620 ADH4P08319 380 aa3.83□□□□□ -1.8
LINC00428-201ENST00000415620 HSPA1AP0DMV8 641 aaKnown RBP3.83□□□□□ -1.8
LINC00428-201ENST00000415620 HSPA1BP0DMV9 641 aaKnown RBP3.83□□□□□ -1.8
LINC00428-201ENST00000415620 STEAP3Q658P3 488 aa3.83□□□□□ -1.8
LINC00428-201ENST00000415620 Q6ZUG5 572 aa3.83□□□□□ -1.8
LINC00428-201ENST00000415620 C1orf210Q8IVY1 113 aa3.83□□□□□ -1.8
LINC00428-201ENST00000415620 DTX3Q8N9I9 347 aa3.83□□□□□ -1.8
LINC00428-201ENST00000415620 RCBTB1Q8NDN9 531 aa3.83□□□□□ -1.8
LINC00428-201ENST00000415620 TTLL11Q8NHH1 800 aa3.83□□□□□ -1.8
LINC00428-201ENST00000415620 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.83□□□□□ -1.8
LINC00428-201ENST00000415620 LRRC59Q96AG4 307 aaKnown RBP3.83□□□□□ -1.8
LINC00428-201ENST00000415620 CDIP1Q9H305 208 aa3.83□□□□□ -1.8
LINC00428-201ENST00000415620 ARHGAP35Q9NRY4 1499 aa3.83□□□□□ -1.8
LINC00428-201ENST00000415620 USP32Q8NFA0 1604 aa3.83□□□□□ -1.8
LINC00428-201ENST00000415620 SYCP2Q9BX26 1530 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 FMN1Q68DA7 1419 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 NOP56O00567 594 aaKnown RBP3.82□□□□□ -1.8
LINC00428-201ENST00000415620 PLSCR1O15162 318 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 MYO1BO43795 1136 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 KNG1P01042 644 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 NAT2P11245 290 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 ZNF16P17020 682 aaPredicted RBP3.82□□□□□ -1.8
LINC00428-201ENST00000415620 ACO1P21399 889 aaKnown RBP3.82□□□□□ -1.8
LINC00428-201ENST00000415620 HOXC12P31275 282 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 CSF2RBP32927 897 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 GPR162Q16538 588 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 CYP4F22Q6NT55 531 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 TMC5Q6UXY8 1006 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 MRGPRGQ86SM5 289 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 SCUBE1Q8IWY4 988 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 ZNF654Q8IZM8 581 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 FAM169BQ8N8A8 192 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 PHOSPHO1Q8TCT1 267 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 PLEKHG4BQ96PX9 1271 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 LGR4Q9BXB1 951 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 KATNBL1Q9H079 304 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 DLL4Q9NR61 685 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 RBPJLQ9UBG7 517 aa3.82□□□□□ -1.8
LINC00428-201ENST00000415620 CEP152O94986 1710 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 ARHGEF28Q8N1W1 1705 aaKnown RBP3.81□□□□□ -1.8
LINC00428-201ENST00000415620 LRRIQ1Q96JM4 1722 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 NWD2Q9ULI1 1742 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 SLIT2O94813 1529 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 MYOM2P54296 1465 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 ERVK-7P63135 1459 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 MST1RQ04912 1400 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 USP19O94966 1318 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 MEFVO15553 781 aaPredicted RBP3.81□□□□□ -1.8
LINC00428-201ENST00000415620 TBX1O43435 398 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 CAPNS1P04632 268 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 MAKP20794 623 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 GJA8P48165 433 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 LSAMPQ13449 338 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 ZNF568Q3ZCX4 644 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 LDLRAD3Q86YD5 345 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 FUKQ8N0W3 1084 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 BTN2A2Q8WVV5 523 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 VOPP1Q96AW1 172 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 GPRASP2Q96D09 838 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 NEIL1Q96FI4 390 aaPredicted RBP3.81□□□□□ -1.8
LINC00428-201ENST00000415620 FAM89AQ96GI7 184 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 C1orf159Q96HA4 380 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 SMOC1Q9H4F8 434 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 MYOTQ9UBF9 498 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 ASH2LQ9UBL3 628 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 NPFFR2Q9Y5X5 522 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 NRAPQ86VF7 1730 aa3.81□□□□□ -1.8
LINC00428-201ENST00000415620 ADCY9O60503 1353 aa3.8□□□□□ -1.8
LINC00428-201ENST00000415620 U2SURPO15042 1029 aaKnown RBP3.8□□□□□ -1.8
LINC00428-201ENST00000415620 C1SP09871 688 aa3.8□□□□□ -1.8
LINC00428-201ENST00000415620 PDIA4P13667 645 aaKnown RBP3.8□□□□□ -1.8
LINC00428-201ENST00000415620 LCP1P13796 627 aa3.8□□□□□ -1.8
LINC00428-201ENST00000415620 LTBRP36941 435 aa3.8□□□□□ -1.8
LINC00428-201ENST00000415620 NCAPHQ15003 741 aa3.8□□□□□ -1.8
LINC00428-201ENST00000415620 SMAD2Q15796 467 aaKnown RBP3.8□□□□□ -1.8
LINC00428-201ENST00000415620 PPP2R5EQ16537 467 aa3.8□□□□□ -1.8
LINC00428-201ENST00000415620 DENND5AQ6IQ26 1287 aa3.8□□□□□ -1.8
LINC00428-201ENST00000415620 Q6ZSN1 163 aa3.8□□□□□ -1.8
LINC00428-201ENST00000415620 METTL16Q86W50 562 aaKnown RBP3.8□□□□□ -1.8
LINC00428-201ENST00000415620 REXO1L1PQ8IX06 675 aa3.8□□□□□ -1.8
LINC00428-201ENST00000415620 EPB41L1Q9H4G0 881 aa3.8□□□□□ -1.8
LINC00428-201ENST00000415620 KCND1Q9NSA2 647 aa3.8□□□□□ -1.8
LINC00428-201ENST00000415620 THSD7AQ9UPZ6 1657 aa3.8□□□□□ -1.8
LINC00428-201ENST00000415620 PTPN23Q9H3S7 1636 aa3.8□□□□□ -1.8
LINC00428-201ENST00000415620 MYO5BQ9ULV0 1848 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 PARD3Q8TEW0 1356 aa3.79□□□□□ -1.8
LINC00428-201ENST00000415620 RAD17O75943 681 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms