RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 SHTN1A0MZ66 631 aa13.55□□□□□ -0.24
UBA3-203ENST00000415609 DDX39AO00148 427 aaKnown RBP13.55□□□□□ -0.24
UBA3-203ENST00000415609 IPO5O00410 1097 aaKnown RBP13.55□□□□□ -0.24
UBA3-203ENST00000415609 ZMYND10O75800 440 aa13.55□□□□□ -0.24
UBA3-203ENST00000415609 FAM228BP0C875 321 aa13.55□□□□□ -0.24
UBA3-203ENST00000415609 PON1P27169 355 aa13.55□□□□□ -0.24
UBA3-203ENST00000415609 TNNT3P45378 269 aaPredicted RBP13.55□□□□□ -0.24
UBA3-203ENST00000415609 NBPF9Q3BBW0 867 aa13.55□□□□□ -0.24
UBA3-203ENST00000415609 ZC2HC1CQ53FD0 456 aaPredicted RBP13.55□□□□□ -0.24
UBA3-203ENST00000415609 KLHDC7AQ5VTJ3 777 aa13.55□□□□□ -0.24
UBA3-203ENST00000415609 GBP6Q6ZN66 633 aa13.55□□□□□ -0.24
UBA3-203ENST00000415609 LXNQ9BS40 222 aa13.55□□□□□ -0.24
UBA3-203ENST00000415609 IKZF4Q9H2S9 585 aa13.55□□□□□ -0.24
UBA3-203ENST00000415609 PKD2L1Q9P0L9 805 aa13.55□□□□□ -0.24
UBA3-203ENST00000415609 WRAP73Q9P2S5 460 aaPredicted RBP13.55□□□□□ -0.24
UBA3-203ENST00000415609 SCAF8Q9UPN6 1271 aaKnown RBP13.55□□□□□ -0.24
UBA3-203ENST00000415609 MYH10P35580 1976 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 TGFB1I1O43294 461 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 PPP1R12BO60237 982 aaPredicted RBP13.54□□□□□ -0.24
UBA3-203ENST00000415609 ICAM1P05362 532 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 KCNA3P22001 575 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 MUTP22033 750 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 INPP5BP32019 993 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 EPHA7Q15375 998 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 KIAA0753Q2KHM9 967 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 STXBP4Q6ZWJ1 553 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 KSR1Q8IVT5 923 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 FAM178BQ8IXR5 827 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 FAM186BQ8IYM0 893 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 BANK1Q8NDB2 785 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 SLC35C1Q96A29 364 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 HOOK2Q96ED9 719 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 ACBD3Q9H3P7 528 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 GCNT4Q9P109 453 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 TSKSQ9UJT2 592 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 ARHGEF35A5YM69 484 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 WNT10BO00744 389 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 PALMO75781 387 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 KLRC1P26715 233 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 PTGER2P43116 358 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 MATR3P43243 847 aaKnown RBP eCLIP13.54□□□□□ -0.247e-7■■■■□ 19.6
UBA3-203ENST00000415609 PTK2Q05397 1052 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 CXCL9Q07325 125 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 NAB2Q15742 525 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 DPY19L2P1Q6NXN4 242 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 ZNF572Q7Z3I7 529 aaPredicted RBP13.54□□□□□ -0.24
UBA3-203ENST00000415609 MXRA8Q9BRK3 442 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 TLR10Q9BXR5 811 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 PACSIN1Q9BY11 444 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 SEL1LQ9UBV2 794 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 UBE4BO95155 1302 aa13.54□□□□□ -0.24
UBA3-203ENST00000415609 SOCS7O14512 581 aa13.53□□□□□ -0.24
UBA3-203ENST00000415609 PSMC2P35998 433 aaKnown RBP13.53□□□□□ -0.24
UBA3-203ENST00000415609 PAFAH1B1P43034 410 aa13.53□□□□□ -0.24
UBA3-203ENST00000415609 HSD17B4P51659 736 aa13.53□□□□□ -0.24
UBA3-203ENST00000415609 ODR4Q5SWX8 454 aa13.53□□□□□ -0.24
UBA3-203ENST00000415609 HS2ST1Q7LGA3 356 aa13.53□□□□□ -0.24
UBA3-203ENST00000415609 MMGT1Q8N4V1 131 aa13.53□□□□□ -0.24
UBA3-203ENST00000415609 MSL3Q8N5Y2 521 aaKnown RBP13.53□□□□□ -0.24
UBA3-203ENST00000415609 SPATA4Q8NEY3 305 aa13.53□□□□□ -0.24
UBA3-203ENST00000415609 VPS33BQ9H267 617 aa13.53□□□□□ -0.24
UBA3-203ENST00000415609 MYOZ2Q9NPC6 264 aa13.53□□□□□ -0.24
UBA3-203ENST00000415609 SMARCAL1Q9NZC9 954 aa13.53□□□□□ -0.24
UBA3-203ENST00000415609 EHD2Q9NZN4 543 aa13.53□□□□□ -0.24
UBA3-203ENST00000415609 KCND2Q9NZV8 630 aa13.53□□□□□ -0.24
UBA3-203ENST00000415609 PGAP2Q9UHJ9 254 aa13.53□□□□□ -0.24
UBA3-203ENST00000415609 ODF2LQ9ULJ1 636 aa13.53□□□□□ -0.24
UBA3-203ENST00000415609 BZW2Q9Y6E2 419 aaKnown RBP13.53□□□□□ -0.24
UBA3-203ENST00000415609 ERICH4A6NGS2 130 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 LRRIQ3A6PVS8 624 aaPredicted RBP13.52□□□□□ -0.24
UBA3-203ENST00000415609 NFIBO00712 420 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 FTCDO95954 541 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 ITGB5P18084 799 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 DNA2P51530 1060 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 ZNF131P52739 623 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 ITIH3Q06033 890 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 COG2Q14746 738 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 TNIP1Q15025 636 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 ZNF720Q7Z2F6 126 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 MIER3Q7Z3K6 550 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 ZNF571Q7Z3V5 609 aaPredicted RBP13.52□□□□□ -0.24
UBA3-203ENST00000415609 IRF2BP2Q7Z5L9 587 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 GSPT2Q8IYD1 628 aaKnown RBP13.52□□□□□ -0.24
UBA3-203ENST00000415609 CPXCR1Q8N123 301 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 CCDC102AQ96A19 550 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 ZBED3Q96IU2 234 aaPredicted RBP13.52□□□□□ -0.24
UBA3-203ENST00000415609 RIT2Q99578 217 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 COL20A1Q9P218 1284 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 ZNF536O15090 1300 aa13.52□□□□□ -0.24
UBA3-203ENST00000415609 A0A0U1RQG5 324 aaPredicted RBP13.52□□□□□ -0.25
UBA3-203ENST00000415609 ALAS1P13196 640 aa13.52□□□□□ -0.25
UBA3-203ENST00000415609 CYP2J2P51589 502 aa13.52□□□□□ -0.25
UBA3-203ENST00000415609 GYS2P54840 703 aa13.52□□□□□ -0.25
UBA3-203ENST00000415609 RASA3Q14644 834 aa13.52□□□□□ -0.25
UBA3-203ENST00000415609 NFIL3Q16649 462 aa13.52□□□□□ -0.25
UBA3-203ENST00000415609 HSP90B2PQ58FF3 399 aa13.52□□□□□ -0.25
UBA3-203ENST00000415609 CIAPIN1Q6FI81 312 aa13.52□□□□□ -0.25
UBA3-203ENST00000415609 B3GNT9Q6UX72 402 aa13.52□□□□□ -0.25
UBA3-203ENST00000415609 PRPF38AQ8NAV1 312 aaKnown RBP13.52□□□□□ -0.25
UBA3-203ENST00000415609 IL31RAQ8NI17 732 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms