RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 KIF5AQ12840 1032 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 STK3Q13188 491 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 MAP7D1Q3KQU3 841 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 SH2D4BQ5SQS7 431 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 RNF220Q5VTB9 566 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 NECAB1Q8N987 351 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 SDF4Q9BRK5 362 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 AGXT2Q9BYV1 514 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 VCXQ9H320 206 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 RETREG1Q9H6L5 497 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 N6AMT1Q9Y5N5 214 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 ATP9BO43861 1147 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 ZMYND10O75800 440 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 MMEP08473 750 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 AKR1B1P15121 316 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 TNNI2P48788 182 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 PLOD1Q02809 727 aaPredicted RBP22.18■■□□□ 1.14
AP1S3-205ENST00000415298 IFI16Q16666 785 aaKnown RBP22.18■■□□□ 1.14
AP1S3-205ENST00000415298 CMPK2Q5EBM0 449 aa22.18■■□□□ 1.14
AP1S3-205ENST00000415298 FOXP4Q8IVH2 680 aaPredicted RBP22.18■■□□□ 1.14
AP1S3-205ENST00000415298 NSUN7Q8NE18 718 aaKnown RBP22.18■■□□□ 1.14
AP1S3-205ENST00000415298 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.18■■□□□ 1.14
AP1S3-205ENST00000415298 P4HA2O15460 535 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 TSPY3P0CV98 308 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 TSPY8P0CW00 308 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 PCP11498 1178 aaKnown RBP22.17■■□□□ 1.14
AP1S3-205ENST00000415298 USP46P62068 366 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 JAG1P78504 1218 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 GUCY1B3Q02153 619 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 TNFAIP1Q13829 316 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 TMEM67Q5HYA8 995 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 TRIM68Q6AZZ1 485 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 CLEC10AQ8IUN9 316 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 KCNMB3Q9NPA1 279 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 TMEM247A6NEH6 219 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 C5orf60A6NFR6 353 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 SH2B2O14492 632 aaPredicted RBP22.17■■□□□ 1.14
AP1S3-205ENST00000415298 CLCN2P51788 898 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 USH1GQ495M9 461 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 KCTD16Q68DU8 428 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 TMEM154Q6P9G4 183 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 ZSCAN10Q96SZ4 725 aaPredicted RBP22.17■■□□□ 1.14
AP1S3-205ENST00000415298 ALDH8A1Q9H2A2 487 aaPredicted RBP22.17■■□□□ 1.14
AP1S3-205ENST00000415298 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.17■■□□□ 1.14
AP1S3-205ENST00000415298 LY9Q9HBG7 655 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 SPO11Q9Y5K1 396 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 TNKSO95271 1327 aa22.17■■□□□ 1.14
AP1S3-205ENST00000415298 NAT2P11245 290 aa22.16■■□□□ 1.14
AP1S3-205ENST00000415298 ADKP55263 362 aaKnown RBP22.16■■□□□ 1.14
AP1S3-205ENST00000415298 MTF1Q14872 753 aa22.16■■□□□ 1.14
AP1S3-205ENST00000415298 KRT72Q14CN4 511 aa22.16■■□□□ 1.14
AP1S3-205ENST00000415298 GLE1Q53GS7 698 aaKnown RBP22.16■■□□□ 1.14
AP1S3-205ENST00000415298 THOC7Q6I9Y2 204 aaKnown RBP22.16■■□□□ 1.14
AP1S3-205ENST00000415298 ENAHQ8N8S7 591 aaPredicted RBP22.16■■□□□ 1.14
AP1S3-205ENST00000415298 RABL2AQ9UBK7 228 aaPredicted RBP22.16■■□□□ 1.14
AP1S3-205ENST00000415298 RCOR1Q9UKL0 485 aa22.16■■□□□ 1.14
AP1S3-205ENST00000415298 LRRC42Q9Y546 428 aa22.16■■□□□ 1.14
AP1S3-205ENST00000415298 TPPPO94811 219 aa22.16■■□□□ 1.14
AP1S3-205ENST00000415298 GDF11O95390 407 aa22.16■■□□□ 1.14
AP1S3-205ENST00000415298 METTL16Q86W50 562 aaKnown RBP22.16■■□□□ 1.14
AP1S3-205ENST00000415298 PANX2Q96RD6 677 aa22.16■■□□□ 1.14
AP1S3-205ENST00000415298 UBAC1Q9BSL1 405 aa22.16■■□□□ 1.14
AP1S3-205ENST00000415298 PPANQ9NQ55 473 aaKnown RBP22.16■■□□□ 1.14
AP1S3-205ENST00000415298 ANGEL1Q9UNK9 670 aaKnown RBP22.16■■□□□ 1.14
AP1S3-205ENST00000415298 ADM5C9JUS6 153 aa22.15■■□□□ 1.14
AP1S3-205ENST00000415298 SUPT3HO75486 399 aa22.15■■□□□ 1.14
AP1S3-205ENST00000415298 RXRAP19793 462 aa22.15■■□□□ 1.14
AP1S3-205ENST00000415298 MLH1P40692 756 aa22.15■■□□□ 1.14
AP1S3-205ENST00000415298 RESTQ13127 1097 aa22.15■■□□□ 1.14
AP1S3-205ENST00000415298 SEC23AQ15436 765 aa22.15■■□□□ 1.14
AP1S3-205ENST00000415298 USP50Q70EL3 339 aaPredicted RBP22.15■■□□□ 1.14
AP1S3-205ENST00000415298 ZNF365Q70YC5 407 aa22.15■■□□□ 1.14
AP1S3-205ENST00000415298 MYL10Q9BUA6 226 aa22.15■■□□□ 1.14
AP1S3-205ENST00000415298 CEP131Q9UPN4 1083 aa22.15■■□□□ 1.14
AP1S3-205ENST00000415298 KLC1Q07866 573 aa22.15■■□□□ 1.14
AP1S3-205ENST00000415298 BYSLQ13895 437 aaKnown RBP22.15■■□□□ 1.14
AP1S3-205ENST00000415298 ZNF287Q9HBT7 754 aa22.15■■□□□ 1.14
AP1S3-205ENST00000415298 IQCA1LA6NCM1 817 aa22.14■■□□□ 1.14
AP1S3-205ENST00000415298 GSTA2P09210 222 aa22.14■■□□□ 1.14
AP1S3-205ENST00000415298 TROVE2P10155 538 aaKnown RBP eCLIP22.14■■□□□ 1.14
AP1S3-205ENST00000415298 APBA1Q02410 837 aa22.14■■□□□ 1.14
AP1S3-205ENST00000415298 OR52E8Q6IFG1 317 aa22.14■■□□□ 1.14
AP1S3-205ENST00000415298 TATDN1Q6P1N9 297 aa22.14■■□□□ 1.14
AP1S3-205ENST00000415298 APOBEC3FQ8IUX4 373 aaKnown RBP22.14■■□□□ 1.14
AP1S3-205ENST00000415298 FSIP1Q8NA03 581 aa22.14■■□□□ 1.14
AP1S3-205ENST00000415298 RRP36Q96EU6 259 aaKnown RBP22.14■■□□□ 1.14
AP1S3-205ENST00000415298 TMEM87BQ96K49 555 aa22.14■■□□□ 1.14
AP1S3-205ENST00000415298 NR1H4Q96RI1 486 aaPredicted RBP22.14■■□□□ 1.14
AP1S3-205ENST00000415298 RPS6KC1Q96S38 1066 aa22.14■■□□□ 1.14
AP1S3-205ENST00000415298 NMRK2Q9NPI5 230 aa22.14■■□□□ 1.14
AP1S3-205ENST00000415298 SLC12A4Q9UP95 1085 aa22.14■■□□□ 1.14
AP1S3-205ENST00000415298 MYH8P13535 1937 aa22.14■■□□□ 1.13
AP1S3-205ENST00000415298 CERKLQ49MI3 558 aaPredicted RBP22.14■■□□□ 1.13
AP1S3-205ENST00000415298 PACS1Q6VY07 963 aa22.14■■□□□ 1.13
AP1S3-205ENST00000415298 RSPH1Q8WYR4 309 aa22.14■■□□□ 1.13
AP1S3-205ENST00000415298 DCPSQ96C86 337 aaKnown RBP22.14■■□□□ 1.13
AP1S3-205ENST00000415298 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.14■■□□□ 1.13
AP1S3-205ENST00000415298 SLC4A7Q9Y6M7 1214 aa22.14■■□□□ 1.13
AP1S3-205ENST00000415298 COL2A1P02458 1487 aaPredicted RBP22.13■■□□□ 1.13
AP1S3-205ENST00000415298 WDR19Q8NEZ3 1342 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms