RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 CUL4BQ13620 913 aa9.31□□□□□ -0.92
SYNE1-211ENST00000413186 LRRC41Q15345 812 aa9.31□□□□□ -0.92
SYNE1-211ENST00000413186 RNF169Q8NCN4 708 aa9.31□□□□□ -0.92
SYNE1-211ENST00000413186 ERO1AQ96HE7 468 aa9.31□□□□□ -0.92
SYNE1-211ENST00000413186 ZNF830Q96NB3 372 aaPredicted RBP9.31□□□□□ -0.92
SYNE1-211ENST00000413186 NMRK2Q9NPI5 230 aa9.31□□□□□ -0.92
SYNE1-211ENST00000413186 ZC4H2Q9NQZ6 224 aa9.31□□□□□ -0.92
SYNE1-211ENST00000413186 FZD1Q9UP38 647 aa9.31□□□□□ -0.92
SYNE1-211ENST00000413186 IGKV6D-41A0A0C4DH26 115 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 ARHGEF37A1IGU5 675 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 PIK3CDO00329 1044 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 HBP1O60381 514 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 MAN2A1Q16706 1144 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 DGKDQ16760 1214 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 ANKRD23Q86SG2 305 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 SFR1Q86XK3 245 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 TMTC1Q8IUR5 882 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 ABI1Q8IZP0 508 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 GUF1Q8N442 669 aaKnown RBP9.3□□□□□ -0.92
SYNE1-211ENST00000413186 CCDC127Q96BQ5 260 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 CLMNQ96JQ2 1002 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 BAG1Q99933 345 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-211ENST00000413186 VTA1Q9NP79 307 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 RGL1Q9NZL6 768 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 RRN3P2A6NIE6 340 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 KBTBD13C9JR72 458 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 ASAP2O43150 1006 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 GAS2O43903 313 aaKnown RBP9.3□□□□□ -0.92
SYNE1-211ENST00000413186 TACC1O75410 805 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 YBX3P16989 372 aaKnown RBP eCLIP9.3□□□□□ -0.92
SYNE1-211ENST00000413186 NAALADL2Q58DX5 795 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 MOB2Q70IA6 237 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 C12orf42Q96LP6 360 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 TUBGCP2Q9BSJ2 902 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 TMEM106CQ9BVX2 250 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 GOLPH3LQ9H4A5 285 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 BAZ2BQ9UIF8 2168 aaKnown RBP9.3□□□□□ -0.92
SYNE1-211ENST00000413186 NEBLO76041 1014 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 SLC26A2P50443 739 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 COASYQ13057 564 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 CYP26C1Q6V0L0 522 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 SLC51AQ86UW1 340 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 CCDC155Q8N6L0 562 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 PRPF31Q8WWY3 499 aaKnown RBP9.3□□□□□ -0.92
SYNE1-211ENST00000413186 GCOM2Q9BZD3 368 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-211ENST00000413186 XPO4Q9C0E2 1151 aaKnown RBP9.3□□□□□ -0.92
SYNE1-211ENST00000413186 FEZ2Q9UHY8 353 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-211ENST00000413186 SPDYE16A6NNV3 312 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-211ENST00000413186 DLATP10515 647 aaKnown RBP9.3□□□□□ -0.92
SYNE1-211ENST00000413186 CYP2C8P10632 490 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 COPB1P53618 953 aaKnown RBP9.3□□□□□ -0.92
SYNE1-211ENST00000413186 PPFIA1Q13136 1202 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 MXD4Q14582 209 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-211ENST00000413186 DAAM2Q86T65 1068 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 ELOA2Q8IYF1 753 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-211ENST00000413186 ANKRD36BP1Q96IX9 119 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 ABHD16BQ9H3Z7 469 aa9.3□□□□□ -0.92
SYNE1-211ENST00000413186 ASTN2O75129 1339 aaPredicted RBP9.29□□□□□ -0.92
SYNE1-211ENST00000413186 TLR3O15455 904 aaKnown RBP9.29□□□□□ -0.92
SYNE1-211ENST00000413186 CYP3A4P08684 503 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 TAF12Q16514 161 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 Q3C1V9 767 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 RNF180Q86T96 592 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 PPM1EQ8WY54 764 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 C7orf25Q9BPX7 421 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 TRIM9Q9C026 710 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 A1CFQ9NQ94 594 aaKnown RBP9.29□□□□□ -0.92
SYNE1-211ENST00000413186 SLC15A5A6NIM6 579 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 ZNF233A6NK53 670 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 KPNA6O60684 536 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 PGK2P07205 417 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 STAT1P42224 750 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 EVX2Q03828 476 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 PGM5Q15124 567 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 PTPAQ15257 358 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 SFMBT2Q5VUG0 894 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 DPH6Q7L8W6 267 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 TSGA10Q9BZW7 698 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 POLR3FQ9H1D9 316 aaPredicted RBP9.29□□□□□ -0.92
SYNE1-211ENST00000413186 LRFN2Q9ULH4 789 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 KIAA0391O15091 583 aaKnown RBP9.29□□□□□ -0.92
SYNE1-211ENST00000413186 LPXNO60711 386 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 RPLP2P05387 115 aaKnown RBP9.29□□□□□ -0.92
SYNE1-211ENST00000413186 ACTR2P61160 394 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 SPRYD7Q5W111 196 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 SMYD4Q8IYR2 804 aaPredicted RBP9.29□□□□□ -0.92
SYNE1-211ENST00000413186 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.29□□□□□ -0.92
SYNE1-211ENST00000413186 AFG3L2Q9Y4W6 797 aa9.29□□□□□ -0.92
SYNE1-211ENST00000413186 AFPP02771 609 aaKnown RBP9.28□□□□□ -0.92
SYNE1-211ENST00000413186 ALDH5A1P51649 535 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-211ENST00000413186 PRKCEQ02156 737 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 ST3GAL1Q11201 340 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 KYAT1Q16773 422 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 EXOC3L4Q17RC7 722 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 SPOUT1Q5T280 376 aaKnown RBP9.28□□□□□ -0.92
SYNE1-211ENST00000413186 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-211ENST00000413186 INTS8Q75QN2 995 aaKnown RBP9.28□□□□□ -0.92
SYNE1-211ENST00000413186 OR8K1Q8NGG5 319 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 MSTO1Q9BUK6 570 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 DNAJC18Q9H819 358 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms