RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 LHX8Q68G74 356 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 PADI6Q6TGC4 694 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 SFR1Q86XK3 245 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 DHX37Q8IY37 1157 aaKnown RBP7.38□□□□□ -1.23
VPS41-204ENST00000413141 SPDYE1Q8NFV5 336 aaPredicted RBP7.38□□□□□ -1.23
VPS41-204ENST00000413141 ENOX1Q8TC92 643 aaKnown RBP7.38□□□□□ -1.23
VPS41-204ENST00000413141 NELFBQ8WX92 580 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 SEPT1Q8WYJ6 367 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 EMID1Q96A84 441 aaPredicted RBP7.38□□□□□ -1.23
VPS41-204ENST00000413141 TRIM47Q96LD4 638 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 SPATA33Q96N06 139 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 PCYT2Q99447 389 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 FGFBP2Q9BYJ0 223 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 ABHD16BQ9H3Z7 469 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 SLC39A2Q9NP94 309 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 SEPT9Q9UHD8 586 aaPredicted RBP7.38□□□□□ -1.23
VPS41-204ENST00000413141 RWDD2AQ9UIY3 292 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 GJD2Q9UKL4 321 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 ZHX1Q9UKY1 873 aaPredicted RBP7.38□□□□□ -1.23
VPS41-204ENST00000413141 ODF2LQ9ULJ1 636 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 MAPK8IP1Q9UQF2 711 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 NFE2L3Q9Y4A8 694 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 PCDHA2Q9Y5H9 948 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 TRIM49BA6NDI0 452 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 NKRFO15226 690 aaKnown RBP eCLIP7.37□□□□□ -1.23
VPS41-204ENST00000413141 ADCY6O43306 1168 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 HIP1RO75146 1068 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 FAM13AO94988 1023 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 TBC1D8O95759 1140 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 ZNF18P17022 549 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 SMPD1P17405 629 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 ATP4AP20648 1035 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 CYP2B6P20813 491 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 PSMC4P43686 418 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 STAT5BP51692 787 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 CASP5P51878 434 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 PMS1P54277 932 aaKnown RBP7.37□□□□□ -1.23
VPS41-204ENST00000413141 NPEPPSP55786 919 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 STX17P56962 302 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 LAMC2Q13753 1193 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 DUSP28Q4G0W2 176 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 XKR9Q5GH70 373 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 XKR3Q5GH77 459 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 HERC4Q5GLZ8 1057 aaPredicted RBP7.37□□□□□ -1.23
VPS41-204ENST00000413141 GJC2Q5T442 439 aaPredicted RBP7.37□□□□□ -1.23
VPS41-204ENST00000413141 SPATA1Q5VX52 437 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 SARM1Q6SZW1 724 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 OTUD6AQ7L8S5 288 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 TRIM50Q86XT4 487 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 DAW1Q8N136 415 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 GUF1Q8N442 669 aaKnown RBP7.37□□□□□ -1.23
VPS41-204ENST00000413141 GLIS3Q8NEA6 775 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 PPTC7Q8NI37 304 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 ANP32BQ92688 251 aaKnown RBP7.37□□□□□ -1.23
VPS41-204ENST00000413141 P2RX5Q93086 422 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 DHTKD1Q96HY7 919 aaPredicted RBP7.37□□□□□ -1.23
VPS41-204ENST00000413141 FAM167AQ96KS9 214 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 CEP170P1Q96L14 293 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 SH2D3AQ9BRG2 576 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 TIPINQ9BVW5 301 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 ZHX3Q9H4I2 956 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 AZI2Q9H6S1 392 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 PARVGQ9HBI0 331 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 CYP26B1Q9NR63 512 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 OLFML3Q9NRN5 406 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 RNF186Q9NXI6 227 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 TBC1D7Q9P0N9 293 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 SEL1LQ9UBV2 794 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 COL4A3BPQ9Y5P4 624 aa7.37□□□□□ -1.23
VPS41-204ENST00000413141 UBE4BO95155 1302 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 BICDL2A1A5D9 508 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 TRPA1O75762 1119 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 DGAT1O75907 488 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 ADCY5O95622 1261 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 LGALS2P05162 132 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 MMP3P08254 477 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 ZNF865P0CJ78 1059 aaPredicted RBP7.36□□□□□ -1.23
VPS41-204ENST00000413141 MYBP10242 640 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 XRCC5P13010 732 aaKnown RBP7.36□□□□□ -1.23
VPS41-204ENST00000413141 HOXD8P13378 290 aaPredicted RBP7.36□□□□□ -1.23
VPS41-204ENST00000413141 ATP1A3P13637 1013 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 CCNE1P24864 410 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 CYP2C19P33261 490 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 SLC26A2P50443 739 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 PLCB2Q00722 1185 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 CAP1Q01518 475 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 SP3Q02447 781 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 PRKCZQ05513 592 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 CCDC173Q0VFZ6 552 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 KIF22Q14807 665 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 LRRC41Q15345 812 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 BMT2Q1RMZ1 405 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 CCDC144BQ3MJ40 725 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 MTERF2Q49AM1 385 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 ZCWPW2Q504Y3 356 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 CDKAL1Q5VV42 579 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 IQSEC1Q6DN90 963 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 TTI2Q6NXR4 508 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 EPM2AIP1Q7L775 607 aaPredicted RBP7.36□□□□□ -1.23
VPS41-204ENST00000413141 PLPPR4Q7Z2D5 763 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms