RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 ARHGAP44Q17R89 818 aa6.93□□□□□ -1.3
HDAC9-205ENST00000411993 ZCCHC8Q6NZY4 707 aaKnown RBP6.93□□□□□ -1.3
HDAC9-205ENST00000411993 DNERQ8NFT8 737 aa6.93□□□□□ -1.3
HDAC9-205ENST00000411993 CALML6Q8TD86 181 aa6.93□□□□□ -1.3
HDAC9-205ENST00000411993 CLUHP3Q96NS8 147 aa6.93□□□□□ -1.3
HDAC9-205ENST00000411993 GNRHR2Q96P88 292 aa6.93□□□□□ -1.3
HDAC9-205ENST00000411993 CD248Q9HCU0 757 aa6.93□□□□□ -1.3
HDAC9-205ENST00000411993 SAMD15Q9P1V8 674 aa6.93□□□□□ -1.3
HDAC9-205ENST00000411993 CDC42EP3Q9UKI2 254 aa6.93□□□□□ -1.3
HDAC9-205ENST00000411993 NR2E1Q9Y466 385 aa6.93□□□□□ -1.3
HDAC9-205ENST00000411993 A0A0G2JNJ9 132 aa6.92□□□□□ -1.3
HDAC9-205ENST00000411993 RASSF10A6NK89 507 aa6.92□□□□□ -1.3
HDAC9-205ENST00000411993 PATE3B3GLJ2 98 aa6.92□□□□□ -1.3
HDAC9-205ENST00000411993 ASLP04424 464 aa6.92□□□□□ -1.3
HDAC9-205ENST00000411993 SELENOPP49908 381 aa6.92□□□□□ -1.3
HDAC9-205ENST00000411993 MEOX1P50221 254 aa6.92□□□□□ -1.3
HDAC9-205ENST00000411993 CCDC144BQ3MJ40 725 aa6.92□□□□□ -1.3
HDAC9-205ENST00000411993 TAX1BP1Q86VP1 789 aa6.92□□□□□ -1.3
HDAC9-205ENST00000411993 RTKN2Q8IZC4 609 aa6.92□□□□□ -1.3
HDAC9-205ENST00000411993 KIAA1683Q9H0B3 1180 aa6.92□□□□□ -1.3
HDAC9-205ENST00000411993 Q9UFV3 132 aa6.92□□□□□ -1.3
HDAC9-205ENST00000411993 C1QTNF3-AMACRE9PGA6 284 aa6.91□□□□□ -1.3
HDAC9-205ENST00000411993 ZNF623O75123 536 aa6.91□□□□□ -1.3
HDAC9-205ENST00000411993 GLRX3O76003 335 aaKnown RBP6.91□□□□□ -1.3
HDAC9-205ENST00000411993 FLT3P36888 993 aa6.91□□□□□ -1.3
HDAC9-205ENST00000411993 MOGSQ13724 837 aa6.91□□□□□ -1.3
HDAC9-205ENST00000411993 RNF151Q2KHN1 245 aa6.91□□□□□ -1.3
HDAC9-205ENST00000411993 HS1BP3Q53T59 392 aa6.91□□□□□ -1.3
HDAC9-205ENST00000411993 CATSPEREQ5SY80 951 aa6.91□□□□□ -1.3
HDAC9-205ENST00000411993 KANK2Q63ZY3 851 aa6.91□□□□□ -1.3
HDAC9-205ENST00000411993 PALM2Q8IXS6 379 aa6.91□□□□□ -1.3
HDAC9-205ENST00000411993 CHST14Q8NCH0 376 aa6.91□□□□□ -1.3
HDAC9-205ENST00000411993 CABP5Q9NP86 173 aa6.91□□□□□ -1.3
HDAC9-205ENST00000411993 ZFR2Q9UPR6 939 aaKnown RBP6.91□□□□□ -1.3
HDAC9-205ENST00000411993 TSC22D4Q9Y3Q8 395 aa6.91□□□□□ -1.3
HDAC9-205ENST00000411993 TNPO3Q9Y5L0 923 aaKnown RBP6.91□□□□□ -1.3
HDAC9-205ENST00000411993 DNAJC8O75937 253 aaPredicted RBP6.9□□□□□ -1.3
HDAC9-205ENST00000411993 ASMTLO95671 621 aa6.9□□□□□ -1.3
HDAC9-205ENST00000411993 RANGAP1P46060 587 aaPredicted RBP6.9□□□□□ -1.3
HDAC9-205ENST00000411993 KIF11P52732 1056 aa6.9□□□□□ -1.3
HDAC9-205ENST00000411993 MAP3K12Q12852 859 aa6.9□□□□□ -1.3
HDAC9-205ENST00000411993 ZNF460Q14592 562 aa6.9□□□□□ -1.3
HDAC9-205ENST00000411993 NOLC1Q14978 699 aaKnown RBP eCLIP6.9□□□□□ -1.3
HDAC9-205ENST00000411993 EIF4HQ15056 248 aaKnown RBP6.9□□□□□ -1.3
HDAC9-205ENST00000411993 GRAMD4Q6IC98 578 aa6.9□□□□□ -1.3
HDAC9-205ENST00000411993 TCTN3Q6NUS6 607 aa6.9□□□□□ -1.3
HDAC9-205ENST00000411993 CC2D1AQ6P1N0 951 aaPredicted RBP6.9□□□□□ -1.3
HDAC9-205ENST00000411993 OTOP1Q7RTM1 612 aa6.9□□□□□ -1.3
HDAC9-205ENST00000411993 SH3RF3Q8TEJ3 882 aaPredicted RBP6.9□□□□□ -1.3
HDAC9-205ENST00000411993 C12orf65Q9H3J6 166 aaKnown RBP6.9□□□□□ -1.3
HDAC9-205ENST00000411993 PCIF1Q9H4Z3 704 aa6.9□□□□□ -1.3
HDAC9-205ENST00000411993 KANSL2Q9H9L4 492 aa6.9□□□□□ -1.3
HDAC9-205ENST00000411993 OAZ3Q9UMX2 235 aa6.9□□□□□ -1.3
HDAC9-205ENST00000411993 GOLGA6L22H0YM25 854 aa6.89□□□□□ -1.31
HDAC9-205ENST00000411993 PPP1R12AO14974 1030 aaPredicted RBP6.89□□□□□ -1.31
HDAC9-205ENST00000411993 MUSKO15146 869 aa6.89□□□□□ -1.31
HDAC9-205ENST00000411993 ARHGAP6O43182 974 aa6.89□□□□□ -1.31
HDAC9-205ENST00000411993 FOXS1O43638 330 aa6.89□□□□□ -1.31
HDAC9-205ENST00000411993 CDC14BO60729 498 aa6.89□□□□□ -1.31
HDAC9-205ENST00000411993 ZBTB48P10074 688 aaPredicted RBP6.89□□□□□ -1.31
HDAC9-205ENST00000411993 APEX1P27695 318 aaKnown RBP6.89□□□□□ -1.31
HDAC9-205ENST00000411993 MECP2P51608 486 aaKnown RBP6.89□□□□□ -1.31
HDAC9-205ENST00000411993 PIK3R6Q5UE93 754 aa6.89□□□□□ -1.31
HDAC9-205ENST00000411993 AGBL4Q5VU57 503 aa6.89□□□□□ -1.31
HDAC9-205ENST00000411993 TMEM200BQ69YZ2 307 aa6.89□□□□□ -1.31
HDAC9-205ENST00000411993 UBE2R2Q712K3 238 aaPredicted RBP6.89□□□□□ -1.31
HDAC9-205ENST00000411993 LARP4Q71RC2 724 aaKnown RBP eCLIP6.89□□□□□ -1.31
HDAC9-205ENST00000411993 FILIP1Q7Z7B0 1213 aa6.89□□□□□ -1.31
HDAC9-205ENST00000411993 Q8TCH9 128 aa6.89□□□□□ -1.31
HDAC9-205ENST00000411993 E2F7Q96AV8 911 aa6.89□□□□□ -1.31
HDAC9-205ENST00000411993 DPYSL5Q9BPU6 564 aa6.89□□□□□ -1.31
HDAC9-205ENST00000411993 TMEM260Q9NX78 707 aa6.89□□□□□ -1.31
HDAC9-205ENST00000411993 PUF60Q9UHX1 559 aaKnown RBP6.89□□□□□ -1.31
HDAC9-205ENST00000411993 FAM184BQ9ULE4 1060 aa6.89□□□□□ -1.31
HDAC9-205ENST00000411993 PTPDC1A2A3K4 754 aa6.88□□□□□ -1.31
HDAC9-205ENST00000411993 H7C1D1 291 aa6.88□□□□□ -1.31
HDAC9-205ENST00000411993 MATN3O15232 486 aa6.88□□□□□ -1.31
HDAC9-205ENST00000411993 TNFRSF1AP19438 455 aa6.88□□□□□ -1.31
HDAC9-205ENST00000411993 CR2P20023 1033 aa6.88□□□□□ -1.31
HDAC9-205ENST00000411993 MRE11P49959 708 aa6.88□□□□□ -1.31
HDAC9-205ENST00000411993 STAT5BP51692 787 aa6.88□□□□□ -1.31
HDAC9-205ENST00000411993 PCOLCEQ15113 449 aa6.88□□□□□ -1.31
HDAC9-205ENST00000411993 USP30Q70CQ3 517 aa6.88□□□□□ -1.31
HDAC9-205ENST00000411993 FOXB1Q99853 325 aa6.88□□□□□ -1.31
HDAC9-205ENST00000411993 KRTAP17-1Q9BYP8 105 aa6.88□□□□□ -1.31
HDAC9-205ENST00000411993 SEMA4AQ9H3S1 761 aa6.88□□□□□ -1.31
HDAC9-205ENST00000411993 JMJD7P0C870 316 aa6.87□□□□□ -1.31
HDAC9-205ENST00000411993 FNTBP49356 437 aa6.87□□□□□ -1.31
HDAC9-205ENST00000411993 ALDH6A1Q02252 535 aaKnown RBP6.87□□□□□ -1.31
HDAC9-205ENST00000411993 PABPC4Q13310 644 aaKnown RBP eCLIP6.87□□□□□ -1.31
HDAC9-205ENST00000411993 NFYCQ13952 458 aa6.87□□□□□ -1.31
HDAC9-205ENST00000411993 CDSNQ15517 529 aa6.87□□□□□ -1.31
HDAC9-205ENST00000411993 ZNF174Q15697 407 aa6.87□□□□□ -1.31
HDAC9-205ENST00000411993 RTN4RL1Q86UN2 441 aaPredicted RBP6.87□□□□□ -1.31
HDAC9-205ENST00000411993 WWC2-AS2Q96NR7 200 aa6.87□□□□□ -1.31
HDAC9-205ENST00000411993 OR14A2Q96R54 314 aa6.87□□□□□ -1.31
HDAC9-205ENST00000411993 OR10A2Q9H208 303 aa6.87□□□□□ -1.31
HDAC9-205ENST00000411993 PIF1Q9H611 641 aa6.87□□□□□ -1.31
HDAC9-205ENST00000411993 ACSS2Q9NR19 701 aa6.87□□□□□ -1.31
HDAC9-205ENST00000411993 RAD17O75943 681 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms