RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 GPR85P60893 370 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 HGFACQ04756 655 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 RIN1Q13671 783 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 TNNI3KQ59H18 835 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 MRM1Q6IN84 353 aaKnown RBP3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 GLCCI1Q86VQ1 547 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 NT5DC4Q86YG4 428 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 IFNL3Q8IZI9 196 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 WNK4Q96J92 1243 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 ZFYVE21Q9BQ24 234 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 ALG1Q9BT22 464 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 EPN3Q9H201 632 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 IPPKQ9H8X2 491 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 Q9UFV3 132 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 MRVI1Q9Y6F6 885 aa3.93□□□□□ -1.78
HMGB3P2-201ENST00000411913 A0A1W2PQU0 124 aa3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 PMS2P1A4D2B8 440 aa3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 VAMP1P23763 118 aa3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 MAN2A2P49641 1150 aa3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 CD83Q01151 205 aa3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 HSP90AA2PQ14568 343 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 ARHGAP36Q6ZRI8 547 aa3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 Q6ZRM9 215 aa3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 SH3RF2Q8TEC5 729 aa3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 MIEF2Q96C03 454 aa3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 MRRFQ96E11 262 aaKnown RBP3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 BTBD2Q9BX70 525 aa3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 KIAA1522Q9P206 1035 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 PACSIN3Q9UKS6 424 aa3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 INPP5FQ9Y2H2 1132 aa3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 ATP23Q9Y6H3 246 aa3.92□□□□□ -1.78
HMGB3P2-201ENST00000411913 TRAF5O00463 557 aa3.91□□□□□ -1.78
HMGB3P2-201ENST00000411913 FAM20BO75063 409 aa3.91□□□□□ -1.78
HMGB3P2-201ENST00000411913 C21orf58P58505 322 aa3.91□□□□□ -1.78
HMGB3P2-201ENST00000411913 STILQ15468 1287 aa3.91□□□□□ -1.78
HMGB3P2-201ENST00000411913 SLC10A6Q3KNW5 377 aa3.91□□□□□ -1.78
HMGB3P2-201ENST00000411913 SYCE2Q6PIF2 218 aa3.91□□□□□ -1.78
HMGB3P2-201ENST00000411913 MRGPREQ86SM8 312 aa3.91□□□□□ -1.78
HMGB3P2-201ENST00000411913 VRK3Q8IV63 474 aa3.91□□□□□ -1.78
HMGB3P2-201ENST00000411913 SYNE4Q8N205 404 aa3.91□□□□□ -1.78
HMGB3P2-201ENST00000411913 SLC25A43Q8WUT9 341 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P2-201ENST00000411913 GPR87Q9BY21 358 aa3.91□□□□□ -1.78
HMGB3P2-201ENST00000411913 SRPK3Q9UPE1 567 aa3.91□□□□□ -1.78
HMGB3P2-201ENST00000411913 TCRBV5S4A2TA0A5A2 114 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 PRAMEF25A6NGN4 478 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 ZAR1LA6NP61 321 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 PRODHO43272 600 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 SSBP05455 408 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 AOAHP28039 575 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 CD38P28907 300 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 MC4RP32245 332 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 ECE1P42892 770 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 STAT5BP51692 787 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 MOGSQ13724 837 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 TOB2Q14106 344 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 PTPAQ15257 358 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 STRIP1Q5VSL9 837 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 GRAMD4Q6IC98 578 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 GAREM2Q75VX8 874 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 ZNF276Q8N554 614 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 RABGGTAQ92696 567 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 IGSF5Q9NSI5 407 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 CATSPERZQ9NTU4 200 aa3.9□□□□□ -1.79
HMGB3P2-201ENST00000411913 BLACEA4D250 179 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 GJB6O95452 261 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 RECKO95980 971 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 ERBB2P04626 1255 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 KRT15P19012 456 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 KRTAP10-11P60412 298 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 GPR19Q15760 415 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 LY6G5CQ5SRR4 150 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 TMEM200BQ69YZ2 307 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 STYK1Q6J9G0 422 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 LRSAM1Q6UWE0 723 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 DPH6Q7L8W6 267 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 BHLHA9Q7RTU4 235 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 PRIMA1Q86XR5 153 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 ADGRG3Q86Y34 549 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 PTRH1Q86Y79 214 aaKnown RBP3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 AARSD1Q9BTE6 412 aaKnown RBP3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 OR10A5Q9H207 317 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 UCKL1Q9NWZ5 548 aa3.89□□□□□ -1.79
HMGB3P2-201ENST00000411913 GOLGA8BA8MQT2 603 aa3.88□□□□□ -1.79
HMGB3P2-201ENST00000411913 KRTAP29-1A8MX34 341 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P2-201ENST00000411913 CDK4P11802 303 aa3.88□□□□□ -1.79
HMGB3P2-201ENST00000411913 ZNF37AP17032 561 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P2-201ENST00000411913 ATF4P18848 351 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P2-201ENST00000411913 STAT3P40763 770 aa3.88□□□□□ -1.79
HMGB3P2-201ENST00000411913 HERVK_113P62684 666 aa3.88□□□□□ -1.79
HMGB3P2-201ENST00000411913 SMAD3P84022 425 aaKnown RBP3.88□□□□□ -1.79
HMGB3P2-201ENST00000411913 ATP2C1P98194 919 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P2-201ENST00000411913 IFRD2Q12894 506 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P2-201ENST00000411913 PAK1Q13153 545 aa3.88□□□□□ -1.79
HMGB3P2-201ENST00000411913 ADAM15Q13444 863 aa3.88□□□□□ -1.79
HMGB3P2-201ENST00000411913 SAFB2Q14151 953 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB3P2-201ENST00000411913 ELAVL1Q15717 326 aaKnown RBP3.88□□□□□ -1.79
HMGB3P2-201ENST00000411913 NTRK3Q16288 839 aa3.88□□□□□ -1.79
HMGB3P2-201ENST00000411913 RABL3Q5HYI8 236 aa3.88□□□□□ -1.79
HMGB3P2-201ENST00000411913 EPHA10Q5JZY3 1008 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms