RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 UMODL1Q5DID0 1318 aa16.54■□□□□ 0.24
SUMO1-207ENST00000409498 PPP6R2O75170 966 aa16.54■□□□□ 0.24
SUMO1-207ENST00000409498 IQCF3P0C7M6 154 aa16.54■□□□□ 0.24
SUMO1-207ENST00000409498 CKBP12277 381 aa16.54■□□□□ 0.24
SUMO1-207ENST00000409498 YWHABP31946 246 aaKnown RBP16.54■□□□□ 0.24
SUMO1-207ENST00000409498 BMP8BP34820 402 aa16.54■□□□□ 0.24
SUMO1-207ENST00000409498 LONP1P36776 959 aaKnown RBP16.54■□□□□ 0.24
SUMO1-207ENST00000409498 IGBP1P78318 339 aa16.54■□□□□ 0.24
SUMO1-207ENST00000409498 CYP4A11Q02928 519 aa16.54■□□□□ 0.24
SUMO1-207ENST00000409498 NME8Q8N427 588 aa16.54■□□□□ 0.24
SUMO1-207ENST00000409498 TRAPPC12Q8WVT3 735 aa16.54■□□□□ 0.24
SUMO1-207ENST00000409498 MMTAG2Q9BU76 263 aaKnown RBP16.54■□□□□ 0.24
SUMO1-207ENST00000409498 WNT8AQ9H1J5 351 aa16.54■□□□□ 0.24
SUMO1-207ENST00000409498 PRO3102Q9H379 93 aa16.54■□□□□ 0.24
SUMO1-207ENST00000409498 FBXO2Q9UK22 296 aaPredicted RBP16.54■□□□□ 0.24
SUMO1-207ENST00000409498 TANC1Q9C0D5 1861 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 VWA3AA6NCI4 1184 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 DDX11L8A8MPP1 907 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 MAFO75444 373 aaPredicted RBP16.53■□□□□ 0.24
SUMO1-207ENST00000409498 SELPP16109 830 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 CYP2C18P33260 490 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 RFC2P35250 354 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 PRPF38BQ5VTL8 546 aaKnown RBP16.53■□□□□ 0.24
SUMO1-207ENST00000409498 KRT79Q5XKE5 535 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 RUFY4Q6ZNE9 571 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 EXOC8Q8IYI6 725 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 TMEM199Q8N511 208 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 RETREG2Q8NC44 543 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 BADQ92934 168 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 NACC1Q96RE7 527 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 PPP1R12CQ9BZL4 782 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 CYP26B1Q9NR63 512 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 SEPT9Q9UHD8 586 aaPredicted RBP16.53■□□□□ 0.24
SUMO1-207ENST00000409498 DBR1Q9UK59 544 aaKnown RBP16.53■□□□□ 0.24
SUMO1-207ENST00000409498 CFAP45Q9UL16 551 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 CIZ1Q9ULV3 898 aaPredicted RBP16.53■□□□□ 0.24
SUMO1-207ENST00000409498 ATP6V1DQ9Y5K8 247 aa16.53■□□□□ 0.24
SUMO1-207ENST00000409498 EVPLQ92817 2033 aa16.52■□□□□ 0.24
SUMO1-207ENST00000409498 MAGEA10P43363 369 aaPredicted RBP16.52■□□□□ 0.24
SUMO1-207ENST00000409498 GRIN1Q05586 938 aa16.52■□□□□ 0.24
SUMO1-207ENST00000409498 MGAT3Q09327 533 aa16.52■□□□□ 0.24
SUMO1-207ENST00000409498 GPNMBQ14956 572 aa16.52■□□□□ 0.24
SUMO1-207ENST00000409498 ECM1Q16610 540 aa16.52■□□□□ 0.24
SUMO1-207ENST00000409498 ZNF618Q5T7W0 954 aa16.52■□□□□ 0.24
SUMO1-207ENST00000409498 FOXD4L5Q5VV16 416 aaPredicted RBP16.52■□□□□ 0.24
SUMO1-207ENST00000409498 RSPH3Q86UC2 560 aa16.52■□□□□ 0.24
SUMO1-207ENST00000409498 KIAA0319LQ8IZA0 1049 aa16.52■□□□□ 0.24
SUMO1-207ENST00000409498 ZNF710Q8N1W2 664 aa16.52■□□□□ 0.24
SUMO1-207ENST00000409498 SNX29Q8TEQ0 813 aa16.52■□□□□ 0.24
SUMO1-207ENST00000409498 FOXD4L4Q8WXT5 416 aaPredicted RBP16.52■□□□□ 0.24
SUMO1-207ENST00000409498 VWCEQ96DN2 955 aa16.52■□□□□ 0.24
SUMO1-207ENST00000409498 LBHD1Q9BQE6 289 aaPredicted RBP16.52■□□□□ 0.24
SUMO1-207ENST00000409498 DHX33Q9H6R0 707 aaKnown RBP16.52■□□□□ 0.24
SUMO1-207ENST00000409498 TSHZ2Q9NRE2 1034 aa16.52■□□□□ 0.24
SUMO1-207ENST00000409498 TFIP11Q9UBB9 837 aaKnown RBP16.52■□□□□ 0.24
SUMO1-207ENST00000409498 KDM3AQ9Y4C1 1321 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 TMEM150BA6NC51 233 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 ZBTB39O15060 712 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 SPTLC2O15270 562 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 CXCL10P02778 98 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 THPOP40225 353 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 CCT6AP40227 531 aaKnown RBP16.51■□□□□ 0.23
SUMO1-207ENST00000409498 RFC5P40937 340 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 RARRES1P49788 294 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 TBC1D8BQ0IIM8 1120 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 MTERF2Q49AM1 385 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 LRRC8DQ7L1W4 858 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 TRMT1LQ7Z2T5 733 aaKnown RBP16.51■□□□□ 0.23
SUMO1-207ENST00000409498 ZNF579Q8NAF0 562 aaKnown RBP16.51■□□□□ 0.23
SUMO1-207ENST00000409498 DNAJB3Q8WWF6 145 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 ZBTB10Q96DT7 871 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 CEP170P1Q96L14 293 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 JPH2Q9BR39 696 aaPredicted RBP16.51■□□□□ 0.23
SUMO1-207ENST00000409498 CCSER1Q9C0I3 900 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 RCOR1Q9UKL0 485 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 RBM19Q9Y4C8 960 aaKnown RBP16.51■□□□□ 0.23
SUMO1-207ENST00000409498 ARID2Q68CP9 1835 aa16.51■□□□□ 0.23
SUMO1-207ENST00000409498 PP2D1A8MPX8 630 aa16.5■□□□□ 0.23
SUMO1-207ENST00000409498 RSPH10B2B2RC85 870 aa16.5■□□□□ 0.23
SUMO1-207ENST00000409498 GAS2O43903 313 aaKnown RBP16.5■□□□□ 0.23
SUMO1-207ENST00000409498 PFKMP08237 780 aa16.5■□□□□ 0.23
SUMO1-207ENST00000409498 RSPH10BP0C881 870 aa16.5■□□□□ 0.23
SUMO1-207ENST00000409498 TMOD1P28289 359 aa16.5■□□□□ 0.23
SUMO1-207ENST00000409498 MARCKSP29966 332 aaPredicted RBP16.5■□□□□ 0.23
SUMO1-207ENST00000409498 CDC25AP30304 524 aa16.5■□□□□ 0.23
SUMO1-207ENST00000409498 CCL23P55773 120 aa16.5■□□□□ 0.23
SUMO1-207ENST00000409498 NPEPPSP55786 919 aa16.5■□□□□ 0.23
SUMO1-207ENST00000409498 MDM2Q00987 491 aaPredicted RBP16.5■□□□□ 0.23
SUMO1-207ENST00000409498 CEBPZQ03701 1054 aaKnown RBP16.5■□□□□ 0.23
SUMO1-207ENST00000409498 DNM1Q05193 864 aaKnown RBP16.5■□□□□ 0.23
SUMO1-207ENST00000409498 FPGSQ05932 587 aa16.5■□□□□ 0.23
SUMO1-207ENST00000409498 PPIGQ13427 754 aaKnown RBP eCLIP16.5■□□□□ 0.23
SUMO1-207ENST00000409498 STK38Q15208 465 aa16.5■□□□□ 0.23
SUMO1-207ENST00000409498 PLA2G4FQ68DD2 849 aa16.5■□□□□ 0.23
SUMO1-207ENST00000409498 EFCAB12Q6NXP0 572 aa16.5■□□□□ 0.23
SUMO1-207ENST00000409498 KRI1Q8N9T8 703 aaKnown RBP16.5■□□□□ 0.23
SUMO1-207ENST00000409498 PNMA5Q96PV4 448 aa16.5■□□□□ 0.23
SUMO1-207ENST00000409498 NT5C3AQ9H0P0 336 aa16.5■□□□□ 0.23
SUMO1-207ENST00000409498 CSRNP2Q9H175 543 aa16.5■□□□□ 0.23
SUMO1-207ENST00000409498 SQORQ9Y6N5 450 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms