RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 CCDC47Q96A33 483 aaKnown RBP17.01■□□□□ 0.31
AP1S3-204ENST00000409375 TIPINQ9BVW5 301 aa17.01■□□□□ 0.31
AP1S3-204ENST00000409375 NIFKQ9BYG3 293 aaKnown RBP17.01■□□□□ 0.31
AP1S3-204ENST00000409375 MCOLN1Q9GZU1 580 aa17.01■□□□□ 0.31
AP1S3-204ENST00000409375 KBTBD4Q9NVX7 518 aa17.01■□□□□ 0.31
AP1S3-204ENST00000409375 MYADML2A6NDP7 307 aa17■□□□□ 0.31
AP1S3-204ENST00000409375 RRN3P2A6NIE6 340 aa17■□□□□ 0.31
AP1S3-204ENST00000409375 DNM1LO00429 736 aa17■□□□□ 0.31
AP1S3-204ENST00000409375 MYCP01106 439 aaPredicted RBP17■□□□□ 0.31
AP1S3-204ENST00000409375 RFC5P40937 340 aa17■□□□□ 0.31
AP1S3-204ENST00000409375 RARRES1P49788 294 aa17■□□□□ 0.31
AP1S3-204ENST00000409375 PSMC6P62333 389 aa17■□□□□ 0.31
AP1S3-204ENST00000409375 DHX8Q14562 1220 aaKnown RBP17■□□□□ 0.31
AP1S3-204ENST00000409375 MCM6Q14566 821 aa17■□□□□ 0.31
AP1S3-204ENST00000409375 POSTNQ15063 836 aa17■□□□□ 0.31
AP1S3-204ENST00000409375 KIAA0753Q2KHM9 967 aa17■□□□□ 0.31
AP1S3-204ENST00000409375 ANO5Q75V66 913 aa17■□□□□ 0.31
AP1S3-204ENST00000409375 KCNK18Q7Z418 384 aa17■□□□□ 0.31
AP1S3-204ENST00000409375 GPBP1Q86WP2 473 aa17■□□□□ 0.31
AP1S3-204ENST00000409375 GLT1D1Q96MS3 346 aa17■□□□□ 0.31
AP1S3-204ENST00000409375 CLSTN2Q9H4D0 955 aa17■□□□□ 0.31
AP1S3-204ENST00000409375 CYP26B1Q9NR63 512 aa17■□□□□ 0.31
AP1S3-204ENST00000409375 OGDHLQ9ULD0 1010 aa17■□□□□ 0.31
AP1S3-204ENST00000409375 KAT6AQ92794 2004 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 HAS3O00219 553 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 GTPBP6O43824 516 aaPredicted RBP16.99■□□□□ 0.31
AP1S3-204ENST00000409375 GAS2O43903 313 aaKnown RBP16.99■□□□□ 0.31
AP1S3-204ENST00000409375 DGAT1O75907 488 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 LETM1O95202 739 aaPredicted RBP16.99■□□□□ 0.31
AP1S3-204ENST00000409375 SMC2O95347 1197 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 GNAT1P11488 350 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 AFMP43652 599 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 ACLYP53396 1101 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 POLGP54098 1239 aaPredicted RBP16.99■□□□□ 0.31
AP1S3-204ENST00000409375 SLC12A3P55017 1021 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 TBC1D8BQ0IIM8 1120 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 PPFIA1Q13136 1202 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 MTERF2Q49AM1 385 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 CCSAPQ6IQ19 270 aaPredicted RBP16.99■□□□□ 0.31
AP1S3-204ENST00000409375 PADI6Q6TGC4 694 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 CXCL17Q6UXB2 119 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 C7orf31Q8N865 590 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 MCPH1Q8NEM0 835 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 U2AF1L4Q8WU68 220 aaKnown RBP16.99■□□□□ 0.31
AP1S3-204ENST00000409375 SLC7A3Q8WY07 619 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 VTI1AQ96AJ9 217 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 PAGE5Q96GU1 130 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 SEZ6LQ9BYH1 1024 aa16.99■□□□□ 0.31
AP1S3-204ENST00000409375 NRCAMQ92823 1304 aa16.98■□□□□ 0.31
AP1S3-204ENST00000409375 ARID2Q68CP9 1835 aa16.98■□□□□ 0.31
AP1S3-204ENST00000409375 MAGEB2O15479 319 aa16.98■□□□□ 0.31
AP1S3-204ENST00000409375 STBD1O95210 358 aa16.98■□□□□ 0.31
AP1S3-204ENST00000409375 SGPL1O95470 568 aa16.98■□□□□ 0.31
AP1S3-204ENST00000409375 TFRCP02786 760 aaKnown RBP16.98■□□□□ 0.31
AP1S3-204ENST00000409375 INSRRP14616 1297 aa16.98■□□□□ 0.31
AP1S3-204ENST00000409375 ATP4AP20648 1035 aa16.98■□□□□ 0.31
AP1S3-204ENST00000409375 CHMP4BP1P59074 171 aa16.98■□□□□ 0.31
AP1S3-204ENST00000409375 PLA2G4FQ68DD2 849 aa16.98■□□□□ 0.31
AP1S3-204ENST00000409375 CAVIN1Q6NZI2 390 aaKnown RBP16.98■□□□□ 0.31
AP1S3-204ENST00000409375 SH3RF1Q7Z6J0 888 aa16.98■□□□□ 0.31
AP1S3-204ENST00000409375 ANKLE1Q8NAG6 615 aa16.98■□□□□ 0.31
AP1S3-204ENST00000409375 RETREG2Q8NC44 543 aa16.98■□□□□ 0.31
AP1S3-204ENST00000409375 KAT2BQ92831 832 aa16.98■□□□□ 0.31
AP1S3-204ENST00000409375 RNPEPQ9H4A4 650 aa16.98■□□□□ 0.31
AP1S3-204ENST00000409375 ATP6V0A4Q9HBG4 840 aa16.98■□□□□ 0.31
AP1S3-204ENST00000409375 ODF2LQ9ULJ1 636 aa16.98■□□□□ 0.31
AP1S3-204ENST00000409375 PCNTO95613 3336 aa16.97■□□□□ 0.31
AP1S3-204ENST00000409375 ZBTB39O15060 712 aa16.97■□□□□ 0.31
AP1S3-204ENST00000409375 USO1O60763 962 aaKnown RBP16.97■□□□□ 0.31
AP1S3-204ENST00000409375 CYP11B2P19099 503 aa16.97■□□□□ 0.31
AP1S3-204ENST00000409375 NPEPPSP55786 919 aa16.97■□□□□ 0.31
AP1S3-204ENST00000409375 IRX5P78411 483 aaPredicted RBP16.97■□□□□ 0.31
AP1S3-204ENST00000409375 RINT1Q6NUQ1 792 aa16.97■□□□□ 0.31
AP1S3-204ENST00000409375 DDX12PQ92771 950 aa16.97■□□□□ 0.31
AP1S3-204ENST00000409375 C7orf25Q9BPX7 421 aa16.97■□□□□ 0.31
AP1S3-204ENST00000409375 ANP32EQ9BTT0 268 aa16.97■□□□□ 0.31
AP1S3-204ENST00000409375 GTPBP4Q9BZE4 634 aaKnown RBP16.97■□□□□ 0.31
AP1S3-204ENST00000409375 TRIM9Q9C026 710 aa16.97■□□□□ 0.31
AP1S3-204ENST00000409375 CRISPLD2Q9H0B8 497 aa16.97■□□□□ 0.31
AP1S3-204ENST00000409375 PHF24Q9UPV7 400 aa16.97■□□□□ 0.31
AP1S3-204ENST00000409375 SCN10AQ9Y5Y9 1956 aa16.97■□□□□ 0.31
AP1S3-204ENST00000409375 A0A087WWV3 80 aa16.96■□□□□ 0.31
AP1S3-204ENST00000409375 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.96■□□□□ 0.31
AP1S3-204ENST00000409375 C17orf102A2RUQ5 167 aa16.96■□□□□ 0.31
AP1S3-204ENST00000409375 TBCAO75347 108 aaKnown RBP16.96■□□□□ 0.31
AP1S3-204ENST00000409375 SMIM10L2AP0DMW4 78 aa16.96■□□□□ 0.31
AP1S3-204ENST00000409375 SMIM10L2BP0DMW5 78 aa16.96■□□□□ 0.31
AP1S3-204ENST00000409375 GUCY2CP25092 1073 aa16.96■□□□□ 0.31
AP1S3-204ENST00000409375 TMOD1P28289 359 aa16.96■□□□□ 0.31
AP1S3-204ENST00000409375 GJA8P48165 433 aa16.96■□□□□ 0.31
AP1S3-204ENST00000409375 DNM2P50570 870 aa16.96■□□□□ 0.31
AP1S3-204ENST00000409375 ASIC1P78348 528 aa16.96■□□□□ 0.31
AP1S3-204ENST00000409375 PTPN11Q06124 597 aaPredicted RBP16.96■□□□□ 0.31
AP1S3-204ENST00000409375 TARBP2Q15633 366 aaKnown RBP16.96■□□□□ 0.31
AP1S3-204ENST00000409375 GRIK4Q16099 956 aa16.96■□□□□ 0.31
AP1S3-204ENST00000409375 CAMK4Q16566 473 aa16.96■□□□□ 0.31
AP1S3-204ENST00000409375 CNNM4Q6P4Q7 775 aa16.96■□□□□ 0.31
AP1S3-204ENST00000409375 CCDC65Q8IXS2 484 aa16.96■□□□□ 0.31
AP1S3-204ENST00000409375 LRRC15Q8TF66 581 aa16.96■□□□□ 0.31
AP1S3-204ENST00000409375 TCP11Q8WWU5 503 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms