RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 RB1P06400 928 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 CD52P31358 61 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 AK2P54819 239 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 TMCO2Q7Z6W1 182 aaPredicted RBP10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 NEK8Q86SG6 692 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 NPAS4Q8IUM7 802 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 TRAPPC12Q8WVT3 735 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 FAM20AQ96MK3 541 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 ASB2Q96Q27 587 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 C11orf84Q9BUA3 381 aaPredicted RBP10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 PHF20Q9BVI0 1012 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 LMAN2LQ9H0V9 348 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 ORC3Q9UBD5 711 aaPredicted RBP10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 DDX25Q9UHL0 483 aaKnown RBP10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 MTUS1Q9ULD2 1270 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 LRFN2Q9ULH4 789 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 TPCN1Q9ULQ1 816 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 TRANK1O15050 2925 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 COL4A4P53420 1690 aaPredicted RBP10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 RALGAPA2Q2PPJ7 1873 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 DENND3A2RUS2 1198 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 EPOPA6NHQ4 379 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 M0R2N6 131 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 RFXAPO00287 272 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 ENPP3O14638 875 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 TBX3O15119 743 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 CHMP2AO43633 222 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 PSMD10O75832 226 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 ARHGEF15O94989 841 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 BAG4O95429 457 aaKnown RBP10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 DNM2P50570 870 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 CRYBB1P53674 252 aaPredicted RBP10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 PRKCEQ02156 737 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 TBC1D8BQ0IIM8 1120 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 BTG3Q14201 252 aaPredicted RBP10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 LETM2Q2VYF4 491 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 EPC2Q52LR7 807 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 NAALADL2Q58DX5 795 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 XKR3Q5GH77 459 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 PPP4R3AQ6IN85 833 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 TMEM192Q8IY95 271 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 EXOC8Q8IYI6 725 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 CMTR2Q8IYT2 770 aaKnown RBP10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 METTL13Q8N6R0 699 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 GDPD5Q8WTR4 605 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 HLA-CQ95604 372 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 GTF3C6Q969F1 213 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 PPP2R3CQ969Q6 453 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 MRPL38Q96DV4 380 aaKnown RBP10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 MBOAT7Q96N66 472 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 SCLT1Q96NL6 688 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 PLVAPQ9BX97 442 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 SUGCTQ9HAC7 445 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 PADI3Q9ULW8 664 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 GINS2Q9Y248 185 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 PPME1Q9Y570 386 aa10.23□□□□□ -0.77
SNORD88A-201ENST00000408314 UNC80Q8N2C7 3258 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 PRRC2BQ5JSZ5 2229 aaKnown RBP10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 H3BNC9 293 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 HOXA2O43364 376 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 NCK2O43639 380 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 TDP2O95551 362 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 CTNNB1P35222 781 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 KRT2P35908 639 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 SARSP49591 514 aaKnown RBP10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 NEK4P51957 841 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 TMEM62Q0P6H9 643 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 NFX1Q12986 1120 aaKnown RBP10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 GPM6BQ13491 265 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 INF2Q27J81 1249 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 SLFN12Q8IYM2 578 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 KIAA0319LQ8IZA0 1049 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 RSPH1Q8WYR4 309 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 LARP6Q9BRS8 491 aaKnown RBP10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 C17orf80Q9BSJ5 609 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 UNC45AQ9H3U1 944 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 AGO3Q9H9G7 860 aaKnown RBP10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 AAASQ9NRG9 546 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 SEPT9Q9UHD8 586 aaPredicted RBP10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 AKT3Q9Y243 479 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 TTC28Q96AY4 2481 aa10.22□□□□□ -0.77
SNORD88A-201ENST00000408314 TTC3P53804 2025 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 ZBTB42B2RXF5 422 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 C5orf67F2Z3F1 127 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 ADAMTS3O15072 1205 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 LPXNO60711 386 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 DGKIO75912 1065 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 ZSCAN20P17040 1043 aaPredicted RBP10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 ATP4AP20648 1035 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 PSMC5P62195 406 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 SAFBQ15424 915 aaKnown RBP eCLIP10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 NPY5RQ15761 445 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 CSPP1Q1MSJ5 1256 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 EFCAB12Q6NXP0 572 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 PIK3AP1Q6ZUJ8 805 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 SLC24A5Q71RS6 500 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 ETNPPLQ8TBG4 499 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 CLP1Q92989 425 aaKnown RBP10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 P2RX5Q93086 422 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 AIFM3Q96NN9 605 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms