RNA–Protein interactions for RNA: ENST00000407997.3

APOBEC3G-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3G, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3G, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3G-201ENST00000407997 MYL5Q02045 173 aa11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 PWP2Q15269 919 aaKnown RBP11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 LRRC41Q15345 812 aa11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 TTC31Q49AM3 519 aaPredicted RBP11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 EARS2Q5JPH6 523 aaKnown RBP11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 HDXQ7Z353 690 aa11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 ZNF467Q7Z7K2 595 aaPredicted RBP11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 CEP112Q8N8E3 955 aa11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 MSANTD4Q8NCY6 345 aa11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 CHST13Q8NET6 341 aa11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 REPS2Q8NFH8 660 aa11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 TRERF1Q96PN7 1200 aa11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 MTMR9Q96QG7 549 aa11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 NUP88Q99567 741 aaPredicted RBP11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 CPVLQ9H3G5 476 aa11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 DISC1Q9NRI5 854 aa11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 LRWD1Q9UFC0 647 aa11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 RAB21Q9UL25 225 aa11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 PHF24Q9UPV7 400 aa11.03□□□□□ -0.64
APOBEC3G-201ENST00000407997 GTPBP6O43824 516 aaPredicted RBP11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 PGK2P07205 417 aa11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 CHRM1P11229 460 aaPredicted RBP11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 KCNA4P22459 653 aa11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 ADCYAP1R1P41586 468 aa11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 HSD17B4P51659 736 aa11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 STIM1Q13586 685 aa11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 USH1GQ495M9 461 aa11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 PRAMEF19Q5SWL8 479 aa11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 SNRNP48Q6IEG0 339 aaKnown RBP11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 CABP7Q86V35 215 aa11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 NEK9Q8TD19 979 aa11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 CDHR1Q96JP9 859 aa11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 CLIC6Q96NY7 704 aa11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 TSEN34Q9BSV6 310 aaKnown RBP11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 PARD6BQ9BYG5 372 aa11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 WDR11Q9BZH6 1224 aa11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 PRDM5Q9NQX1 630 aaPredicted RBP11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 FAM184BQ9ULE4 1060 aa11.02□□□□□ -0.64
APOBEC3G-201ENST00000407997 ERCC5P28715 1186 aaPredicted RBP11.02□□□□□ -0.65
APOBEC3G-201ENST00000407997 UBASH3AP57075 661 aa11.02□□□□□ -0.65
APOBEC3G-201ENST00000407997 MAMDC4Q6UXC1 1216 aa11.02□□□□□ -0.65
APOBEC3G-201ENST00000407997 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.02□□□□□ -0.65
APOBEC3G-201ENST00000407997 TMEM139Q8IV31 216 aa11.02□□□□□ -0.65
APOBEC3G-201ENST00000407997 SUGP1Q8IWZ8 645 aaKnown RBP11.02□□□□□ -0.65
APOBEC3G-201ENST00000407997 FAM71BQ8TC56 605 aa11.02□□□□□ -0.65
APOBEC3G-201ENST00000407997 RASGRP4Q8TDF6 673 aa11.02□□□□□ -0.65
APOBEC3G-201ENST00000407997 MED4Q9NPJ6 270 aa11.02□□□□□ -0.65
APOBEC3G-201ENST00000407997 MTMR10Q9NXD2 777 aa11.02□□□□□ -0.65
APOBEC3G-201ENST00000407997 RANBP2P49792 3224 aaKnown RBP11.02□□□□□ -0.65
APOBEC3G-201ENST00000407997 DKC1O60832 514 aaKnown RBP eCLIP11.01□□□□□ -0.65
APOBEC3G-201ENST00000407997 CFBP00751 764 aa11.01□□□□□ -0.65
APOBEC3G-201ENST00000407997 TBX2Q13207 712 aaPredicted RBP11.01□□□□□ -0.65
APOBEC3G-201ENST00000407997 KCNB1Q14721 858 aa11.01□□□□□ -0.65
APOBEC3G-201ENST00000407997 TRIM60Q495X7 471 aa11.01□□□□□ -0.65
APOBEC3G-201ENST00000407997 LONRF3Q496Y0 759 aa11.01□□□□□ -0.65
APOBEC3G-201ENST00000407997 CCDC174Q6PII3 467 aa11.01□□□□□ -0.65
APOBEC3G-201ENST00000407997 SRGAP1Q7Z6B7 1085 aa11.01□□□□□ -0.65
APOBEC3G-201ENST00000407997 SH3RF1Q7Z6J0 888 aa11.01□□□□□ -0.65
APOBEC3G-201ENST00000407997 SPATA20Q8TB22 786 aa11.01□□□□□ -0.65
APOBEC3G-201ENST00000407997 CRYGNQ8WXF5 182 aa11.01□□□□□ -0.65
APOBEC3G-201ENST00000407997 NCAPGQ9BPX3 1015 aa11.01□□□□□ -0.65
APOBEC3G-201ENST00000407997 SPC25Q9HBM1 224 aa11.01□□□□□ -0.65
APOBEC3G-201ENST00000407997 RLFQ13129 1914 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 FAM205CA6NFA0 338 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 MOXD2PA6NHM9 499 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 FANCGO15287 622 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 ACTN4O43707 911 aaKnown RBP11□□□□□ -0.65
APOBEC3G-201ENST00000407997 ZNF865P0CJ78 1059 aaPredicted RBP11□□□□□ -0.65
APOBEC3G-201ENST00000407997 CORO7P57737 925 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 GNG11P61952 73 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 PSMD2Q13200 908 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 HYIQ5T013 277 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 CNNM4Q6P4Q7 775 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 USP17L6PQ6QN14 398 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 SV2BQ7L1I2 683 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 ANKRD35Q8N283 1001 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 DHX58Q96C10 678 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 TOX2Q96NM4 488 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 MYCBPQ99417 103 aaPredicted RBP11□□□□□ -0.65
APOBEC3G-201ENST00000407997 RIT2Q99578 217 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 KCNMB3Q9NPA1 279 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 SERTAD1Q9UHV2 236 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 FRMPD3Q5JV73 1810 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 PVALEFA0A1B0GWK0 134 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 H3BQF6 201 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 TRIM66O15016 1216 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 CLTBP09497 229 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 TXKP42681 527 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 SARSP49591 514 aaKnown RBP11□□□□□ -0.65
APOBEC3G-201ENST00000407997 UBE2SQ16763 222 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 CEP55Q53EZ4 464 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 BEND6Q5SZJ8 279 aaPredicted RBP11□□□□□ -0.65
APOBEC3G-201ENST00000407997 SWT1Q5T5J6 900 aaKnown RBP11□□□□□ -0.65
APOBEC3G-201ENST00000407997 ZNF697Q5TEC3 545 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 NLRX1Q86UT6 975 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 EFCAB13Q8IY85 973 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 CPXCR1Q8N123 301 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 PCSK9Q8NBP7 692 aaKnown RBP11□□□□□ -0.65
APOBEC3G-201ENST00000407997 DNERQ8NFT8 737 aa11□□□□□ -0.65
APOBEC3G-201ENST00000407997 ERCC4Q92889 916 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms