RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ING2Q9H160 280 aa12.91□□□□□ -0.34
SMCR8-201ENST00000406438 ZWILCHQ9H900 591 aa12.91□□□□□ -0.34
SMCR8-201ENST00000406438 RASGRF2O14827 1237 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 EAF2Q96CJ1 260 aaPredicted RBP12.9□□□□□ -0.34
SMCR8-201ENST00000406438 HSPA4LO95757 839 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 FLOT2Q14254 428 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 ACAD11Q709F0 780 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 EEPD1Q7L9B9 569 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 CYP26B1Q9NR63 512 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 SPATS2LQ9NUQ6 558 aaKnown RBP12.9□□□□□ -0.34
SMCR8-201ENST00000406438 IKBKBO14920 756 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 ZNF500O60304 480 aaPredicted RBP12.9□□□□□ -0.34
SMCR8-201ENST00000406438 FAM160B2Q86V87 743 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 EPAS1Q99814 870 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 KLHL8Q9P2G9 620 aaPredicted RBP12.9□□□□□ -0.34
SMCR8-201ENST00000406438 FARP1Q9Y4F1 1045 aaPredicted RBP12.9□□□□□ -0.34
SMCR8-201ENST00000406438 UBN2Q6ZU65 1347 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 GTPBP10A4D1E9 387 aaKnown RBP12.9□□□□□ -0.34
SMCR8-201ENST00000406438 ACSL3O95573 720 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 SPARCL1Q14515 664 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 GPT2Q8TD30 523 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 PDCD6IPQ8WUM4 868 aaKnown RBP12.9□□□□□ -0.34
SMCR8-201ENST00000406438 MTBPQ96DY7 904 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 RRAGDQ9NQL2 400 aaPredicted RBP12.9□□□□□ -0.34
SMCR8-201ENST00000406438 CREB3O43889 395 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 ANP32DO95626 131 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 SLC16A2P36021 539 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 SLCO1A2P46721 670 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 RASGRP4Q8TDF6 673 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 DIS3Q9Y2L1 958 aaKnown RBP12.9□□□□□ -0.34
SMCR8-201ENST00000406438 KCNA1Q09470 495 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 MXD4Q14582 209 aaPredicted RBP12.9□□□□□ -0.34
SMCR8-201ENST00000406438 MORF4L2Q15014 288 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 ZMYM1Q5SVZ6 1142 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 APOA5Q6Q788 366 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 RPAINQ86UA6 219 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 ST13P4Q8IZP2 240 aaPredicted RBP12.9□□□□□ -0.34
SMCR8-201ENST00000406438 TTC8Q8TAM2 541 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 ARHGEF1Q92888 912 aaKnown RBP12.9□□□□□ -0.34
SMCR8-201ENST00000406438 EMILIN3Q9NT22 766 aa12.9□□□□□ -0.34
SMCR8-201ENST00000406438 ATP8B1O43520 1251 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 GDF11O95390 407 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 ATICP31939 592 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 IL6STP40189 918 aaPredicted RBP12.89□□□□□ -0.35
SMCR8-201ENST00000406438 LRRC41Q15345 812 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 LRRC31Q6UY01 552 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 ACRBPQ8NEB7 543 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 SLC10A4Q96EP9 437 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 ZMAT2Q96NC0 199 aaKnown RBP12.89□□□□□ -0.35
SMCR8-201ENST00000406438 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.89□□□□□ -0.35
SMCR8-201ENST00000406438 MYO9BQ13459 2157 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 LLGL1Q15334 1064 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 NEK9Q8TD19 979 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 PYGBP11216 843 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 DDX5P17844 614 aaKnown RBP12.89□□□□□ -0.35
SMCR8-201ENST00000406438 JAK3P52333 1124 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 TSPY1Q01534 308 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 RHOT2Q8IXI1 618 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 PPP1R16BQ96T49 567 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 DBNDD1Q9H9R9 158 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 GSPT1P15170 499 aaKnown RBP12.89□□□□□ -0.35
SMCR8-201ENST00000406438 OR6B3Q8NGW1 331 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 ASPSCR1Q9BZE9 553 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 DENND3A2RUS2 1198 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 KRT37O76014 449 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 FAM196AQ6ZSG2 479 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 CHD1O14646 1710 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 MAN1A2O60476 641 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 MYCP01106 439 aaPredicted RBP12.89□□□□□ -0.35
SMCR8-201ENST00000406438 ADD2P35612 726 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 GRAMD1BQ3KR37 738 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 USP17L2Q6R6M4 530 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 SCG3Q8WXD2 468 aaKnown RBP12.89□□□□□ -0.35
SMCR8-201ENST00000406438 ZNF341Q9BYN7 854 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 TRPV6Q9H1D0 765 aa12.89□□□□□ -0.35
SMCR8-201ENST00000406438 TRIP13Q15645 432 aaPredicted RBP12.89□□□□□ -0.35
SMCR8-201ENST00000406438 CLDN3O15551 220 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 MYL3P08590 195 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 COPS2P61201 443 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 SLC7A5Q01650 507 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 DALRD3Q5D0E6 543 aaKnown RBP12.88□□□□□ -0.35
SMCR8-201ENST00000406438 AFG1LQ8WV93 481 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 STRIP2Q9ULQ0 834 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 PCDHA5Q9Y5H7 936 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 TNFAIP2Q03169 654 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 PANX2Q96RD6 677 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 KDM4CQ9H3R0 1056 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 TRPC5Q9UL62 973 aaPredicted RBP12.88□□□□□ -0.35
SMCR8-201ENST00000406438 FTCDO95954 541 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 NR1D1P20393 614 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 USPL1Q5W0Q7 1092 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 WDR75Q8IWA0 830 aaKnown RBP12.88□□□□□ -0.35
SMCR8-201ENST00000406438 ENOX1Q8TC92 643 aaKnown RBP12.88□□□□□ -0.35
SMCR8-201ENST00000406438 GCOM2Q9BZD3 368 aaPredicted RBP12.88□□□□□ -0.35
SMCR8-201ENST00000406438 FTOQ9C0B1 505 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMCR8-201ENST00000406438 ZNF699Q32M78 642 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 ACTR5Q9H9F9 607 aaPredicted RBP12.88□□□□□ -0.35
SMCR8-201ENST00000406438 APOBEC2Q9Y235 224 aaKnown RBP12.88□□□□□ -0.35
SMCR8-201ENST00000406438 SOWAHDA6NJG2 315 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 RAD17O75943 681 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms