RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB3P18-201ENST00000406327 RRP12Q5JTH9 1297 aaKnown RBP6.09□□□□□ -1.43
HMGB3P18-201ENST00000406327 NLRX1Q86UT6 975 aa6.09□□□□□ -1.43
HMGB3P18-201ENST00000406327 EXOC8Q8IYI6 725 aa6.09□□□□□ -1.43
HMGB3P18-201ENST00000406327 GBP4Q96PP9 640 aa6.09□□□□□ -1.43
HMGB3P18-201ENST00000406327 PLCD4Q9BRC7 762 aa6.09□□□□□ -1.43
HMGB3P18-201ENST00000406327 ZNF277Q9NRM2 450 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P18-201ENST00000406327 C1orf112Q9NSG2 853 aa6.09□□□□□ -1.43
HMGB3P18-201ENST00000406327 OAS3Q9Y6K5 1087 aaKnown RBP6.09□□□□□ -1.43
HMGB3P18-201ENST00000406327 TCRBV5S2A0A599 114 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 SGSM2O43147 1006 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 PRPF3O43395 683 aaKnown RBP6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 PCDHGA12O60330 932 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 DTNBO60941 627 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 DBHP09172 617 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 NBPF7P0C2Y1 421 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 TRIM27P14373 513 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 AGXTP21549 392 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 LPOP22079 712 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 MANFP55145 182 aaKnown RBP6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 GP2P55259 537 aaKnown RBP6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 ROM1Q03395 351 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 SEC23AQ15436 765 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 LONRF3Q496Y0 759 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 PAN2Q504Q3 1202 aaKnown RBP6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 ARHGAP29Q52LW3 1261 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 IFIT1BQ5T764 474 aaKnown RBP6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 EPM2AIP1Q7L775 607 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 CERS3Q8IU89 383 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 SMC5Q8IY18 1101 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 CALML6Q8TD86 181 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 MYLIPQ8WY64 445 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 ZNF496Q96IT1 587 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 TUBGCP5Q96RT8 1024 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 FOXB1Q99853 325 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 TNFRSF12AQ9NP84 129 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 NGRNQ9NPE2 291 aaKnown RBP6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 CCDC39Q9UFE4 941 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 PCDHGA9Q9Y5G4 932 aaKnown RBP6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 PCDHGA8Q9Y5G5 932 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 PCDHGA7Q9Y5G6 932 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 PCDHGA6Q9Y5G7 932 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 PCDHGA3Q9Y5H0 932 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 PCDHGA2Q9Y5H1 932 aa6.08□□□□□ -1.44
HMGB3P18-201ENST00000406327 LOC102724159A0A0B4J2E5 919 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 NOTOA8MTQ0 251 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 MPOP05164 745 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 MMEP08473 750 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 FAHP16930 419 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 AOAHP28039 575 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 MTNR1BP49286 362 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 SLC16A1P53985 500 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 MOGSQ13724 837 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 ODF1Q14990 250 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 PWP2Q15269 919 aaKnown RBP6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 SPRED2Q7Z698 418 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 C11orf96Q7Z7L8 435 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 DTX1Q86Y01 620 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 CMIPQ8IY22 773 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 TGFBRAP1Q8WUH2 860 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 ASB15Q8WXK1 588 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 AUTS2Q8WXX7 1259 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 JADE3Q92613 823 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 RPGRQ92834 1020 aaKnown RBP6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 ERCC4Q92889 916 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 MS4A5Q9H3V2 200 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 MAN1C1Q9NR34 630 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 ARHGAP28Q9P2N2 729 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 ZBTB21Q9ULJ3 1066 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 TELO2Q9Y4R8 837 aa6.07□□□□□ -1.44
HMGB3P18-201ENST00000406327 KIAA1324LA8MWY0 1029 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 F8W031 263 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 PSPNO60542 156 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 ASGR2P07307 311 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 TMEM253P0C7T8 217 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 PHKG2P15735 406 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 ERVFRD-1P60508 538 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 HTRA3P83110 453 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 SRSF2Q01130 221 aaKnown RBP6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 PICALMQ13492 652 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 SPIDRQ14159 915 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 VPS72Q15906 364 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 ANO4Q32M45 955 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 TOR2AQ5JU69 321 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 MBNL2Q5VZF2 373 aaKnown RBP6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 OLFML2BQ68BL8 750 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 SLFN12LQ6IEE8 588 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 KIAA1841Q6NSI8 718 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 CCDC62Q6P9F0 684 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 ZNF574Q6ZN55 896 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 SVIPQ8NHG7 77 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 CLEC4DQ8WXI8 215 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 DDX11Q96FC9 970 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 TSPAN17Q96FV3 270 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 LRGUKQ96M69 825 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 SARGQ9BW04 601 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 KRTAP4-2Q9BYR5 136 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 ANO3Q9BYT9 981 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 QRSL1Q9H0R6 528 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms