RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 TDHQ8IZJ6 230 aa16.35■□□□□ 0.21
CDPF1-203ENST00000404583 FOXD4L4Q8WXT5 416 aaPredicted RBP16.35■□□□□ 0.21
CDPF1-203ENST00000404583 NIFKQ9BYG3 293 aaKnown RBP16.35■□□□□ 0.21
CDPF1-203ENST00000404583 CEP131Q9UPN4 1083 aa16.35■□□□□ 0.21
CDPF1-203ENST00000404583 SMIM35A0A1B0GVV1 85 aa16.34■□□□□ 0.21
CDPF1-203ENST00000404583 A0A1W2PPC1 479 aa16.34■□□□□ 0.21
CDPF1-203ENST00000404583 ZBTB39O15060 712 aa16.34■□□□□ 0.21
CDPF1-203ENST00000404583 NBNO60934 754 aa16.34■□□□□ 0.21
CDPF1-203ENST00000404583 C22orf31O95567 290 aa16.34■□□□□ 0.21
CDPF1-203ENST00000404583 RFC2P35250 354 aa16.34■□□□□ 0.21
CDPF1-203ENST00000404583 FXR2P51116 673 aaKnown RBP eCLIP16.34■□□□□ 0.21
CDPF1-203ENST00000404583 ATP2C1P98194 919 aaPredicted RBP16.34■□□□□ 0.21
CDPF1-203ENST00000404583 BECN1Q14457 450 aa16.34■□□□□ 0.21
CDPF1-203ENST00000404583 MBTPS1Q14703 1052 aa16.34■□□□□ 0.21
CDPF1-203ENST00000404583 TARBP2Q15633 366 aaKnown RBP16.34■□□□□ 0.21
CDPF1-203ENST00000404583 PLA2G4FQ68DD2 849 aa16.34■□□□□ 0.21
CDPF1-203ENST00000404583 RPAINQ86UA6 219 aa16.34■□□□□ 0.21
CDPF1-203ENST00000404583 RSPH3Q86UC2 560 aa16.34■□□□□ 0.21
CDPF1-203ENST00000404583 ZSWIM4Q9H7M6 989 aa16.34■□□□□ 0.21
CDPF1-203ENST00000404583 SIP14410 1827 aa16.33■□□□□ 0.21
CDPF1-203ENST00000404583 CAND2O75155 1236 aa16.33■□□□□ 0.2
CDPF1-203ENST00000404583 CHRNA1P02708 482 aa16.33■□□□□ 0.2
CDPF1-203ENST00000404583 SPATA31C1P0DKV0 1188 aa16.33■□□□□ 0.2
CDPF1-203ENST00000404583 PRPHP41219 470 aa16.33■□□□□ 0.2
CDPF1-203ENST00000404583 NPEPPSP55786 919 aa16.33■□□□□ 0.2
CDPF1-203ENST00000404583 TMEM62Q0P6H9 643 aa16.33■□□□□ 0.2
CDPF1-203ENST00000404583 PDIA5Q14554 519 aa16.33■□□□□ 0.2
CDPF1-203ENST00000404583 SF3A1Q15459 793 aaKnown RBP16.33■□□□□ 0.2
CDPF1-203ENST00000404583 DTHD1Q6ZMT9 781 aa16.33■□□□□ 0.2
CDPF1-203ENST00000404583 METTL13Q8N6R0 699 aa16.33■□□□□ 0.2
CDPF1-203ENST00000404583 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.2
CDPF1-203ENST00000404583 NEK9Q8TD19 979 aa16.33■□□□□ 0.2
CDPF1-203ENST00000404583 CEP89Q96ST8 783 aa16.33■□□□□ 0.2
CDPF1-203ENST00000404583 OSBPL7Q9BZF2 842 aa16.33■□□□□ 0.2
CDPF1-203ENST00000404583 FTOQ9C0B1 505 aaKnown RBP eCLIP16.33■□□□□ 0.2
CDPF1-203ENST00000404583 ZSCAN16Q9H4T2 348 aaPredicted RBP16.33■□□□□ 0.2
CDPF1-203ENST00000404583 LRWD1Q9UFC0 647 aa16.33■□□□□ 0.2
CDPF1-203ENST00000404583 MYH15Q9Y2K3 1946 aa16.33■□□□□ 0.2
CDPF1-203ENST00000404583 A0A087WWV3 80 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 MAGEB2O15479 319 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 MED24O75448 989 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 PARNO95453 639 aaKnown RBP16.32■□□□□ 0.2
CDPF1-203ENST00000404583 FGBP02675 491 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 YWHABP31946 246 aaKnown RBP16.32■□□□□ 0.2
CDPF1-203ENST00000404583 MGAT3Q09327 533 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 TBC1D8BQ0IIM8 1120 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 PKP1Q13835 747 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 FAM26DQ5JW98 314 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 EFCAB12Q6NXP0 572 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 PSRC1Q6PGN9 363 aaPredicted RBP16.32■□□□□ 0.2
CDPF1-203ENST00000404583 OTOP2Q7RTS6 562 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 CATSPER3Q86XQ3 398 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 KIAA0319LQ8IZA0 1049 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 LRRC71Q8N4P6 559 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 IGSF22Q8N9C0 903 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 ERMNQ8TAM6 284 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 CYP26B1Q9NR63 512 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 CLIC4Q9Y696 253 aa16.32■□□□□ 0.2
CDPF1-203ENST00000404583 CXCL10P02778 98 aa16.31■□□□□ 0.2
CDPF1-203ENST00000404583 PFKMP08237 780 aa16.31■□□□□ 0.2
CDPF1-203ENST00000404583 ZSCAN22P10073 491 aaPredicted RBP16.31■□□□□ 0.2
CDPF1-203ENST00000404583 PDIA4P13667 645 aaKnown RBP16.31■□□□□ 0.2
CDPF1-203ENST00000404583 CDC25AP30304 524 aa16.31■□□□□ 0.2
CDPF1-203ENST00000404583 CLCN3P51790 818 aa16.31■□□□□ 0.2
CDPF1-203ENST00000404583 MRPS6P82932 125 aaKnown RBP16.31■□□□□ 0.2
CDPF1-203ENST00000404583 Q7L0L9 218 aa16.31■□□□□ 0.2
CDPF1-203ENST00000404583 OTUD6AQ7L8S5 288 aa16.31■□□□□ 0.2
CDPF1-203ENST00000404583 NME8Q8N427 588 aa16.31■□□□□ 0.2
CDPF1-203ENST00000404583 PIGOQ8TEQ8 1089 aa16.31■□□□□ 0.2
CDPF1-203ENST00000404583 CEP170P1Q96L14 293 aa16.31■□□□□ 0.2
CDPF1-203ENST00000404583 POLR3CQ9BUI4 534 aaPredicted RBP16.31■□□□□ 0.2
CDPF1-203ENST00000404583 RAB34Q9BZG1 259 aa16.31■□□□□ 0.2
CDPF1-203ENST00000404583 SUGCTQ9HAC7 445 aa16.31■□□□□ 0.2
CDPF1-203ENST00000404583 TUFT1Q9NNX1 390 aa16.31■□□□□ 0.2
CDPF1-203ENST00000404583 CDY2AQ9Y6F7 541 aa16.31■□□□□ 0.2
CDPF1-203ENST00000404583 ARID2Q68CP9 1835 aa16.31■□□□□ 0.2
CDPF1-203ENST00000404583 VWA3AA6NCI4 1184 aa16.3■□□□□ 0.2
CDPF1-203ENST00000404583 PP2D1A8MPX8 630 aa16.3■□□□□ 0.2
CDPF1-203ENST00000404583 LYPLA2O95372 231 aa16.3■□□□□ 0.2
CDPF1-203ENST00000404583 RPLP2P05387 115 aaKnown RBP16.3■□□□□ 0.2
CDPF1-203ENST00000404583 RPA1P27694 616 aa16.3■□□□□ 0.2
CDPF1-203ENST00000404583 CEBPZQ03701 1054 aaKnown RBP16.3■□□□□ 0.2
CDPF1-203ENST00000404583 XKR9Q5GH70 373 aa16.3■□□□□ 0.2
CDPF1-203ENST00000404583 IER5Q5VY09 327 aa16.3■□□□□ 0.2
CDPF1-203ENST00000404583 ARL6IP4Q66PJ3 421 aaKnown RBP16.3■□□□□ 0.2
CDPF1-203ENST00000404583 LINC01465Q8N7H1 131 aa16.3■□□□□ 0.2
CDPF1-203ENST00000404583 RNPC3Q96LT9 517 aaKnown RBP16.3■□□□□ 0.2
CDPF1-203ENST00000404583 PPP1R16BQ96T49 567 aa16.3■□□□□ 0.2
CDPF1-203ENST00000404583 M0QZ92 97 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 MAFO75444 373 aaPredicted RBP16.29■□□□□ 0.2
CDPF1-203ENST00000404583 BMP15O95972 392 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 F13A1P00488 732 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 VTNP04004 478 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 TMOD1P28289 359 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 CCT6AP40227 531 aaKnown RBP16.29■□□□□ 0.2
CDPF1-203ENST00000404583 DRP2Q13474 957 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 PTPAQ15257 358 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 ECM1Q16610 540 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 TCTN1Q2MV58 587 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 HAUS3Q68CZ6 603 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms