RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 GAP43P17677 238 aa23.29■■□□□ 1.32
TPM1-208ENST00000404484 GIT2Q14161 759 aa23.29■■□□□ 1.32
TPM1-208ENST00000404484 PRAMEF19Q5SWL8 479 aa23.29■■□□□ 1.32
TPM1-208ENST00000404484 RINT1Q6NUQ1 792 aa23.29■■□□□ 1.32
TPM1-208ENST00000404484 GUF1Q8N442 669 aaKnown RBP23.29■■□□□ 1.32
TPM1-208ENST00000404484 CRISPLD2Q9H0B8 497 aa23.29■■□□□ 1.32
TPM1-208ENST00000404484 HSD3B7Q9H2F3 369 aa23.29■■□□□ 1.32
TPM1-208ENST00000404484 WRAP73Q9P2S5 460 aaPredicted RBP23.29■■□□□ 1.32
TPM1-208ENST00000404484 COL4A3BPQ9Y5P4 624 aa23.29■■□□□ 1.32
TPM1-208ENST00000404484 GOLGA6L6A8MZA4 724 aa23.28■■□□□ 1.32
TPM1-208ENST00000404484 ZNF18P17022 549 aa23.28■■□□□ 1.32
TPM1-208ENST00000404484 STX17P56962 302 aa23.28■■□□□ 1.32
TPM1-208ENST00000404484 ACTR2P61160 394 aa23.28■■□□□ 1.32
TPM1-208ENST00000404484 HERC4Q5GLZ8 1057 aaPredicted RBP23.28■■□□□ 1.32
TPM1-208ENST00000404484 KIAA0895Q8NCT3 520 aa23.28■■□□□ 1.32
TPM1-208ENST00000404484 REEP2Q9BRK0 252 aa23.28■■□□□ 1.32
TPM1-208ENST00000404484 TINF2Q9BSI4 451 aa23.28■■□□□ 1.32
TPM1-208ENST00000404484 SLC39A2Q9NP94 309 aa23.28■■□□□ 1.32
TPM1-208ENST00000404484 ANKEF1Q9NU02 776 aa23.28■■□□□ 1.32
TPM1-208ENST00000404484 MAPK8IP1Q9UQF2 711 aa23.28■■□□□ 1.32
TPM1-208ENST00000404484 PDE4DIPQ5VU43 2346 aa23.28■■□□□ 1.32
TPM1-208ENST00000404484 TPM3P06753 285 aa23.27■■□□□ 1.32
TPM1-208ENST00000404484 CYBAP13498 195 aa23.27■■□□□ 1.32
TPM1-208ENST00000404484 CDK11BP21127 795 aaKnown RBP23.27■■□□□ 1.32
TPM1-208ENST00000404484 CCNE1P24864 410 aa23.27■■□□□ 1.32
TPM1-208ENST00000404484 FANCCQ00597 558 aa23.27■■□□□ 1.32
TPM1-208ENST00000404484 C1orf186Q6ZWK4 172 aa23.27■■□□□ 1.32
TPM1-208ENST00000404484 NOC3LQ8WTT2 800 aaKnown RBP23.27■■□□□ 1.32
TPM1-208ENST00000404484 MED15Q96RN5 788 aa23.27■■□□□ 1.32
TPM1-208ENST00000404484 RUSC1Q9BVN2 902 aa23.27■■□□□ 1.32
TPM1-208ENST00000404484 ODF2LQ9ULJ1 636 aa23.27■■□□□ 1.32
TPM1-208ENST00000404484 TNRC18O15417 2968 aaPredicted RBP23.27■■□□□ 1.32
TPM1-208ENST00000404484 NPHP3-ACAD11A0A0J9YXS1 232 aa23.27■■□□□ 1.32
TPM1-208ENST00000404484 SERPINC1P01008 464 aa23.27■■□□□ 1.32
TPM1-208ENST00000404484 PTMAP06454 111 aaKnown RBP23.27■■□□□ 1.32
TPM1-208ENST00000404484 UBA1P22314 1058 aaKnown RBP23.27■■□□□ 1.32
TPM1-208ENST00000404484 GUCY2CP25092 1073 aa23.27■■□□□ 1.32
TPM1-208ENST00000404484 YWHABP31946 246 aaKnown RBP23.27■■□□□ 1.32
TPM1-208ENST00000404484 SPAG1Q07617 926 aa23.27■■□□□ 1.32
TPM1-208ENST00000404484 LHX8Q68G74 356 aa23.27■■□□□ 1.32
TPM1-208ENST00000404484 FOXR2Q6PJQ5 311 aa23.27■■□□□ 1.32
TPM1-208ENST00000404484 P2RX5Q93086 422 aa23.27■■□□□ 1.32
TPM1-208ENST00000404484 TIPINQ9BVW5 301 aa23.27■■□□□ 1.32
TPM1-208ENST00000404484 FAM13AO94988 1023 aa23.26■■□□□ 1.31
TPM1-208ENST00000404484 SUPT20HL2P0C7V6 817 aa23.26■■□□□ 1.31
TPM1-208ENST00000404484 CNGA1P29973 690 aa23.26■■□□□ 1.31
TPM1-208ENST00000404484 HS1BP3Q53T59 392 aa23.26■■□□□ 1.31
TPM1-208ENST00000404484 METTL7BQ6UX53 244 aa23.26■■□□□ 1.31
TPM1-208ENST00000404484 ABHD15Q6UXT9 468 aa23.26■■□□□ 1.31
TPM1-208ENST00000404484 CYFIP1Q7L576 1253 aa23.26■■□□□ 1.31
TPM1-208ENST00000404484 OTUD6AQ7L8S5 288 aa23.26■■□□□ 1.31
TPM1-208ENST00000404484 MYOCDQ8IZQ8 938 aa23.26■■□□□ 1.31
TPM1-208ENST00000404484 ANKRD20A12PQ8NF67 263 aa23.26■■□□□ 1.31
TPM1-208ENST00000404484 ZHX3Q9H4I2 956 aa23.26■■□□□ 1.31
TPM1-208ENST00000404484 SEL1LQ9UBV2 794 aa23.26■■□□□ 1.31
TPM1-208ENST00000404484 PLXNA1Q9UIW2 1896 aa23.25■■□□□ 1.31
TPM1-208ENST00000404484 ATP1A3P13637 1013 aa23.25■■□□□ 1.31
TPM1-208ENST00000404484 RARRES1P49788 294 aa23.25■■□□□ 1.31
TPM1-208ENST00000404484 SP2Q02086 613 aa23.25■■□□□ 1.31
TPM1-208ENST00000404484 RAD51AP2Q09MP3 1159 aa23.25■■□□□ 1.31
TPM1-208ENST00000404484 CDKAL1Q5VV42 579 aa23.25■■□□□ 1.31
TPM1-208ENST00000404484 MAMDC4Q6UXC1 1216 aa23.25■■□□□ 1.31
TPM1-208ENST00000404484 ARMCX2Q7L311 632 aa23.25■■□□□ 1.31
TPM1-208ENST00000404484 VTA1Q9NP79 307 aa23.25■■□□□ 1.31
TPM1-208ENST00000404484 IFNKQ9P0W0 207 aa23.25■■□□□ 1.31
TPM1-208ENST00000404484 GABBR1Q9UBS5 961 aa23.25■■□□□ 1.31
TPM1-208ENST00000404484 FARP2O94887 1054 aaPredicted RBP23.24■■□□□ 1.31
TPM1-208ENST00000404484 ATG7O95352 703 aa23.24■■□□□ 1.31
TPM1-208ENST00000404484 UGCGQ16739 394 aa23.24■■□□□ 1.31
TPM1-208ENST00000404484 CENPPQ6IPU0 288 aa23.24■■□□□ 1.31
TPM1-208ENST00000404484 PADI6Q6TGC4 694 aa23.24■■□□□ 1.31
TPM1-208ENST00000404484 UBE2Q1Q7Z7E8 422 aa23.24■■□□□ 1.31
TPM1-208ENST00000404484 DRC7Q8IY82 874 aa23.24■■□□□ 1.31
TPM1-208ENST00000404484 MSL3Q8N5Y2 521 aaKnown RBP23.24■■□□□ 1.31
TPM1-208ENST00000404484 SCFD2Q8WU76 684 aa23.24■■□□□ 1.31
TPM1-208ENST00000404484 HPS3Q969F9 1004 aa23.24■■□□□ 1.31
TPM1-208ENST00000404484 CTAGE1Q96RT6 745 aa23.24■■□□□ 1.31
TPM1-208ENST00000404484 TSG101Q99816 390 aa23.24■■□□□ 1.31
TPM1-208ENST00000404484 PARVGQ9HBI0 331 aa23.24■■□□□ 1.31
TPM1-208ENST00000404484 SAMSN1Q9NSI8 373 aaKnown RBP23.24■■□□□ 1.31
TPM1-208ENST00000404484 OGDHLQ9ULD0 1010 aa23.24■■□□□ 1.31
TPM1-208ENST00000404484 BACH1O14867 736 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 ZBTB39O15060 712 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 SNAI1O95863 264 aaPredicted RBP23.23■■□□□ 1.31
TPM1-208ENST00000404484 UBASH3AP57075 661 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 SP4Q02446 784 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 CACNB1Q02641 598 aaPredicted RBP23.23■■□□□ 1.31
TPM1-208ENST00000404484 LRRC63Q05C16 580 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 TTLL4Q14679 1199 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 TTI2Q6NXR4 508 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 EEPD1Q7L9B9 569 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 THAP9Q9H5L6 903 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 OLFML3Q9NRN5 406 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 DDX20Q9UHI6 824 aaKnown RBP23.23■■□□□ 1.31
TPM1-208ENST00000404484 DDX41Q9UJV9 622 aaKnown RBP23.23■■□□□ 1.31
TPM1-208ENST00000404484 PCDHA2Q9Y5H9 948 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 IGSF9BQ9UPX0 1349 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 FGFR1OPO95684 399 aaKnown RBP23.23■■□□□ 1.31
TPM1-208ENST00000404484 GGPS1O95749 300 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 CAPN2P17655 700 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms