RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 ASTN1O14525 1302 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 UBR3Q6ZT12 1888 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 NDUFAB1O14561 156 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 EIF3DO15371 548 aaKnown RBP eCLIP11.72□□□□□ -0.53
CLIP4-204ENST00000404424 ZBTB48P10074 688 aaPredicted RBP11.72□□□□□ -0.53
CLIP4-204ENST00000404424 NFIAQ12857 509 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 PDCLQ13371 301 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 SLC15A2Q16348 729 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 TCERG1LQ5VWI1 586 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 KCTD16Q68DU8 428 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 PEX26Q7Z412 305 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 FMNL3Q8IVF7 1028 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 TEX2Q8IWB9 1127 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 SH2D3CQ8N5H7 860 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 ARFGAP2Q8N6H7 521 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 UIMC1Q96RL1 719 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 SIX2Q9NPC8 291 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 PI4KBQ9UBF8 816 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 FAM86B1E9PN63 330 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 MEIS1O00470 390 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 RAD21O60216 631 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 PPP1R12BO60237 982 aaPredicted RBP11.71□□□□□ -0.53
CLIP4-204ENST00000404424 GCNT3O95395 438 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 CYP3A4P08684 503 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 FAM86B2P0C5J1 330 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 STAT1P42224 750 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 ERVK-9P63128 1117 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 HLTFQ14527 1009 aaKnown RBP eCLIP11.71□□□□□ -0.53
CLIP4-204ENST00000404424 PACS2Q86VP3 889 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 METTL13Q8N6R0 699 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 GMCL1P1Q8NEA9 526 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 GMCL1Q96IK5 515 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 ZDHHC15Q96MV8 337 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 PAGR1Q9BTK6 254 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 EPN3Q9H201 632 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 BHMT2Q9H2M3 363 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 SLITRK6Q9H5Y7 841 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 TMBIM4Q9HC24 238 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 GCNT4Q9P109 453 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 PLAAQ9Y263 795 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 STXBP5LQ9Y2K9 1186 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 RABGAP1Q9Y3P9 1069 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 DAAM1Q9Y4D1 1078 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 ANKRD65E5RJM6 399 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 MSH4O15457 936 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 SART1O43290 800 aaKnown RBP11.71□□□□□ -0.53
CLIP4-204ENST00000404424 LSP1P33241 339 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 CRKP46108 304 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 DDR1Q08345 913 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 MTMR3Q13615 1198 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 TATDN1Q6P1N9 297 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 TMEM179Q6ZVK1 233 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 MAATS1Q7Z4T9 603 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 CCDC26Q8TAB7 109 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 RNPC3Q96LT9 517 aaKnown RBP11.71□□□□□ -0.53
CLIP4-204ENST00000404424 P2RX7Q99572 595 aaKnown RBP11.71□□□□□ -0.53
CLIP4-204ENST00000404424 MKNK1Q9BUB5 465 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 VAV3Q9UKW4 847 aa11.71□□□□□ -0.53
CLIP4-204ENST00000404424 DIS3Q9Y2L1 958 aaKnown RBP11.71□□□□□ -0.53
CLIP4-204ENST00000404424 NOC2LQ9Y3T9 749 aaKnown RBP11.71□□□□□ -0.53
CLIP4-204ENST00000404424 TMCO5BA8MYB1 307 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 F5H6K3 240 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 NPM3O75607 178 aaKnown RBP11.7□□□□□ -0.54
CLIP4-204ENST00000404424 PPP1R37O75864 691 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 ECHS1P30084 290 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 PSMC2P35998 433 aaKnown RBP11.7□□□□□ -0.54
CLIP4-204ENST00000404424 ATP1A2P50993 1020 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 ICA1Q05084 483 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 KLRC3Q07444 240 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 CEP85LQ5SZL2 805 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 TTC19Q6DKK2 380 aaPredicted RBP11.7□□□□□ -0.54
CLIP4-204ENST00000404424 MICALCLQ6ZW33 695 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 BORCS6Q96GS4 357 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 EIF2AK1Q9BQI3 630 aaKnown RBP11.7□□□□□ -0.54
CLIP4-204ENST00000404424 IDI2Q9BXS1 227 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 TTC7AQ9ULT0 858 aaPredicted RBP11.7□□□□□ -0.54
CLIP4-204ENST00000404424 G3V3G9 751 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 GCOM1H8Y6P7 765 aaPredicted RBP11.7□□□□□ -0.54
CLIP4-204ENST00000404424 KRIT1O00522 736 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 DDX3XO00571 662 aaKnown RBP eCLIP11.7□□□□□ -0.54
CLIP4-204ENST00000404424 ERLIN2O94905 339 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 CCDC172P0C7W6 258 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 MYZAPP0CAP1 466 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 LMNB1P20700 586 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 MDH1P40925 334 aaKnown RBP11.7□□□□□ -0.54
CLIP4-204ENST00000404424 CASP4P49662 377 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 ITGB3BPQ13352 177 aaPredicted RBP11.7□□□□□ -0.54
CLIP4-204ENST00000404424 TRADDQ15628 312 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 SLC27A3Q5K4L6 730 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 DCAF8Q5TAQ9 597 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 SYDE2Q5VT97 1194 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 RINT1Q6NUQ1 792 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 RUFY4Q6ZNE9 571 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 NT5DC3Q86UY8 548 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 ZFPM1Q8IX07 1006 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 MICALL1Q8N3F8 863 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 HES6Q96HZ4 224 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 TUFT1Q9NNX1 390 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 UBE4BO95155 1302 aa11.7□□□□□ -0.54
CLIP4-204ENST00000404424 RSPH10B2B2RC85 870 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms