RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 XKR9Q5GH70 373 aa37.14■■■■□ 3.54
CSNK1E-204ENST00000403904 KCTD17Q8N5Z5 321 aa37.14■■■■□ 3.54
CSNK1E-204ENST00000403904 C7orf31Q8N865 590 aa37.14■■■■□ 3.54
CSNK1E-204ENST00000403904 IQUBQ8NA54 791 aa37.14■■■■□ 3.54
CSNK1E-204ENST00000403904 HDAC6Q9UBN7 1215 aa37.14■■■■□ 3.54
CSNK1E-204ENST00000403904 EYA4O95677 639 aa37.13■■■■□ 3.53
CSNK1E-204ENST00000403904 RARRES1P49788 294 aa37.13■■■■□ 3.53
CSNK1E-204ENST00000403904 PPFIA1Q13136 1202 aa37.13■■■■□ 3.53
CSNK1E-204ENST00000403904 TRAPPC12Q8WVT3 735 aa37.13■■■■□ 3.53
CSNK1E-204ENST00000403904 RAD54LQ92698 747 aa37.13■■■■□ 3.53
CSNK1E-204ENST00000403904 CEP170P1Q96L14 293 aa37.13■■■■□ 3.53
CSNK1E-204ENST00000403904 SETD4Q9NVD3 440 aa37.13■■■■□ 3.53
CSNK1E-204ENST00000403904 DBR1Q9UK59 544 aaKnown RBP37.13■■■■□ 3.53
CSNK1E-204ENST00000403904 ARID2Q68CP9 1835 aa37.13■■■■□ 3.53
CSNK1E-204ENST00000403904 LOXHD1Q8IVV2 1947 aa37.13■■■■□ 3.53
CSNK1E-204ENST00000403904 ZBTB42B2RXF5 422 aa37.12■■■■□ 3.53
CSNK1E-204ENST00000403904 IGBP1P78318 339 aa37.12■■■■□ 3.53
CSNK1E-204ENST00000403904 FAM47CQ5HY64 1035 aa37.12■■■■□ 3.53
CSNK1E-204ENST00000403904 TNS4Q8IZW8 715 aa37.12■■■■□ 3.53
CSNK1E-204ENST00000403904 PAWRQ96IZ0 340 aaKnown RBP37.12■■■■□ 3.53
CSNK1E-204ENST00000403904 CCDC43Q96MW1 224 aaKnown RBP37.12■■■■□ 3.53
CSNK1E-204ENST00000403904 CYP26B1Q9NR63 512 aa37.12■■■■□ 3.53
CSNK1E-204ENST00000403904 STK17AQ9UEE5 414 aa37.12■■■■□ 3.53
CSNK1E-204ENST00000403904 FAM160A1Q05DH4 1040 aa37.12■■■■□ 3.53
CSNK1E-204ENST00000403904 SNW1Q13573 536 aaKnown RBP37.12■■■■□ 3.53
CSNK1E-204ENST00000403904 DHX8Q14562 1220 aaKnown RBP37.12■■■■□ 3.53
CSNK1E-204ENST00000403904 FMR1NBQ8N0W7 255 aaPredicted RBP37.12■■■■□ 3.53
CSNK1E-204ENST00000403904 ENGASEQ8NFI3 743 aa37.12■■■■□ 3.53
CSNK1E-204ENST00000403904 LARP4BQ92615 738 aaKnown RBP37.12■■■■□ 3.53
CSNK1E-204ENST00000403904 SSBP05455 408 aaKnown RBP eCLIP37.11■■■■□ 3.53
CSNK1E-204ENST00000403904 PLA2G4BP0C869 781 aa37.11■■■■□ 3.53
CSNK1E-204ENST00000403904 COL6A1P12109 1028 aa37.11■■■■□ 3.53
CSNK1E-204ENST00000403904 MCM6Q14566 821 aa37.11■■■■□ 3.53
CSNK1E-204ENST00000403904 TARBP2Q15633 366 aaKnown RBP37.11■■■■□ 3.53
CSNK1E-204ENST00000403904 GRIK4Q16099 956 aa37.11■■■■□ 3.53
CSNK1E-204ENST00000403904 PYM1Q9BRP8 204 aaKnown RBP37.11■■■■□ 3.53
CSNK1E-204ENST00000403904 A0A0U1RQG5 324 aaPredicted RBP37.1■■■■□ 3.53
CSNK1E-204ENST00000403904 NR1I2O75469 434 aa37.1■■■■□ 3.53
CSNK1E-204ENST00000403904 ZNF202O95125 648 aa37.1■■■■□ 3.53
CSNK1E-204ENST00000403904 HIC1Q14526 733 aa37.1■■■■□ 3.53
CSNK1E-204ENST00000403904 LONRF3Q496Y0 759 aa37.1■■■■□ 3.53
CSNK1E-204ENST00000403904 ZNF484Q5JVG2 852 aa37.1■■■■□ 3.53
CSNK1E-204ENST00000403904 NFRKBQ6P4R8 1299 aa37.1■■■■□ 3.53
CSNK1E-204ENST00000403904 SERTAD1Q9UHV2 236 aa37.1■■■■□ 3.53
CSNK1E-204ENST00000403904 NRCAMQ92823 1304 aa37.09■■■■□ 3.53
CSNK1E-204ENST00000403904 TRIP12Q14669 1992 aaPredicted RBP37.09■■■■□ 3.53
CSNK1E-204ENST00000403904 ARHGEF35A5YM69 484 aa37.09■■■■□ 3.53
CSNK1E-204ENST00000403904 LMBR1Q8WVP7 490 aa37.09■■■■□ 3.53
CSNK1E-204ENST00000403904 CEP89Q96ST8 783 aa37.09■■■■□ 3.53
CSNK1E-204ENST00000403904 SLC12A3P55017 1021 aa37.08■■■■□ 3.53
CSNK1E-204ENST00000403904 SYT2Q8N9I0 419 aaPredicted RBP37.08■■■■□ 3.53
CSNK1E-204ENST00000403904 ZBTB10Q96DT7 871 aa37.08■■■■□ 3.53
CSNK1E-204ENST00000403904 GTF2IRD1Q9UHL9 959 aa37.08■■■■□ 3.53
CSNK1E-204ENST00000403904 ACTN4O43707 911 aaKnown RBP37.08■■■■□ 3.53
CSNK1E-204ENST00000403904 C11orf49Q9H6J7 331 aa37.08■■■■□ 3.53
CSNK1E-204ENST00000403904 BMP2KQ9NSY1 1161 aaPredicted RBP37.08■■■■□ 3.53
CSNK1E-204ENST00000403904 COL1A2P08123 1366 aa37.07■■■■□ 3.53
CSNK1E-204ENST00000403904 C17orf102A2RUQ5 167 aa37.07■■■■□ 3.52
CSNK1E-204ENST00000403904 CCDC85CA6NKD9 419 aa37.07■■■■□ 3.52
CSNK1E-204ENST00000403904 ATN1P54259 1190 aaPredicted RBP37.07■■■■□ 3.52
CSNK1E-204ENST00000403904 ZNF200P98182 395 aaPredicted RBP37.07■■■■□ 3.52
CSNK1E-204ENST00000403904 MARCH8Q5T0T0 291 aa37.07■■■■□ 3.52
CSNK1E-204ENST00000403904 SESTD1Q86VW0 696 aa37.07■■■■□ 3.52
CSNK1E-204ENST00000403904 SLC43A3Q8NBI5 491 aa37.07■■■■□ 3.52
CSNK1E-204ENST00000403904 CUEDC2Q9H467 287 aa37.07■■■■□ 3.52
CSNK1E-204ENST00000403904 RRN3P2A6NIE6 340 aa37.06■■■■□ 3.52
CSNK1E-204ENST00000403904 ARVCFO00192 962 aa37.06■■■■□ 3.52
CSNK1E-204ENST00000403904 SLFN14P0C7P3 912 aa37.06■■■■□ 3.52
CSNK1E-204ENST00000403904 GDF6Q6KF10 455 aaPredicted RBP37.06■■■■□ 3.52
CSNK1E-204ENST00000403904 PADI6Q6TGC4 694 aa37.06■■■■□ 3.52
CSNK1E-204ENST00000403904 NECAB2Q7Z6G3 386 aa37.06■■■■□ 3.52
CSNK1E-204ENST00000403904 CEP57L1Q8IYX8 460 aa37.06■■■■□ 3.52
CSNK1E-204ENST00000403904 STAMQ92783 540 aa37.06■■■■□ 3.52
CSNK1E-204ENST00000403904 HOXC8P31273 242 aa37.05■■■■□ 3.52
CSNK1E-204ENST00000403904 SOX10P56693 466 aa37.05■■■■□ 3.52
CSNK1E-204ENST00000403904 TBC1D8BQ0IIM8 1120 aa37.05■■■■□ 3.52
CSNK1E-204ENST00000403904 SV2BQ7L1I2 683 aa37.05■■■■□ 3.52
CSNK1E-204ENST00000403904 USO1O60763 962 aaKnown RBP37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 KLRC1P26715 233 aa37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 ADAM17P78536 824 aa37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 SLC39A5Q6ZMH5 540 aa37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 GPT2Q8TD30 523 aa37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 DACT1Q9NYF0 836 aa37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 USP25Q9UHP3 1055 aa37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 EVPLQ92817 2033 aa37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 GNAT1P11488 350 aa37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 POLGP54098 1239 aaPredicted RBP37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 RINT1Q6NUQ1 792 aa37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 MTHFD1LQ6UB35 978 aa37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 KRBA2Q6ZNG9 492 aa37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 CNNM3Q8NE01 707 aa37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 RUSC1Q9BVN2 902 aa37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 KBTBD4Q9NVX7 518 aa37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 TUBE1Q9UJT0 475 aa37.04■■■■□ 3.52
CSNK1E-204ENST00000403904 TREHO43280 583 aa37.03■■■■□ 3.52
CSNK1E-204ENST00000403904 C22orf31O95567 290 aa37.03■■■■□ 3.52
CSNK1E-204ENST00000403904 CDK7P50613 346 aa37.03■■■■□ 3.52
CSNK1E-204ENST00000403904 PTPN11Q06124 597 aaPredicted RBP37.03■■■■□ 3.52
CSNK1E-204ENST00000403904 GPBP1Q86WP2 473 aa37.03■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms