RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 LRRC4BQ9NT99 713 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 PKD2L1Q9P0L9 805 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 KDM3AQ9Y4C1 1321 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 MYH7BA7E2Y1 1941 aa13.07□□□□□ -0.32
RBM39-206ENST00000403542 DDX3XO00571 662 aaKnown RBP eCLIP13.06□□□□□ -0.321e-17■□□□□ 11
RBM39-206ENST00000403542 GNA14O95837 355 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 ATP2B4P23634 1241 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 DHX9Q08211 1270 aaKnown RBP13.06□□□□□ -0.32
RBM39-206ENST00000403542 ZNF844Q08AG5 666 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 ITGB3BPQ13352 177 aaPredicted RBP13.06□□□□□ -0.32
RBM39-206ENST00000403542 SEPT2Q15019 361 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 QPCTQ16769 361 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 KDM7AQ6ZMT4 941 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 TPH2Q8IWU9 490 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 TAS2R14Q9NYV8 317 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 TMOD4Q9NZQ9 345 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 IGSF9BQ9UPX0 1349 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 EML1O00423 815 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 H2AFZP0C0S5 128 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 SPATA31C1P0DKV0 1188 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 GALCP54803 685 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 MAGOHP61326 146 aaKnown RBP13.06□□□□□ -0.32
RBM39-206ENST00000403542 SPRED3Q2MJR0 410 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 KRT71Q3SY84 523 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 SLFN13Q68D06 897 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 CDC42EP5Q6NZY7 148 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 BARGINQ6ZT62 677 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 H2AFVQ71UI9 128 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 MYCT1Q8N699 235 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 SYN2Q92777 582 aaPredicted RBP13.06□□□□□ -0.32
RBM39-206ENST00000403542 MAGOHBQ96A72 148 aaKnown RBP13.06□□□□□ -0.32
RBM39-206ENST00000403542 CNOT8Q9UFF9 292 aaKnown RBP13.06□□□□□ -0.32
RBM39-206ENST00000403542 PPP1R9AQ9ULJ8 1098 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 MEIS2O14770 477 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 BUB1BO60566 1050 aaPredicted RBP13.06□□□□□ -0.32
RBM39-206ENST00000403542 TBCAO75347 108 aaKnown RBP13.06□□□□□ -0.32
RBM39-206ENST00000403542 FLOT1O75955 427 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 SMARCA1P28370 1054 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 IFFO1Q0D2I5 559 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 NBPF9Q3BBW0 867 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 UBAP2Q5T6F2 1119 aaKnown RBP13.06□□□□□ -0.32
RBM39-206ENST00000403542 MMS22LQ6ZRQ5 1243 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 SLF2Q8IX21 1173 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 LRRC57Q8N9N7 239 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 WHAMMQ8TF30 809 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 DBNDD1Q9H9R9 158 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 RNF14Q9UBS8 474 aa13.06□□□□□ -0.32
RBM39-206ENST00000403542 PHF20L1A8MW92 1017 aa13.05□□□□□ -0.32
RBM39-206ENST00000403542 MEFVO15553 781 aaPredicted RBP13.05□□□□□ -0.32
RBM39-206ENST00000403542 EVI5O60447 810 aa13.05□□□□□ -0.32
RBM39-206ENST00000403542 TNFRSF8P28908 595 aa13.05□□□□□ -0.32
RBM39-206ENST00000403542 USP8P40818 1118 aa13.05□□□□□ -0.32
RBM39-206ENST00000403542 SLC35C1Q96A29 364 aa13.05□□□□□ -0.32
RBM39-206ENST00000403542 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.05□□□□□ -0.324e-15■■■□□ 15.3
RBM39-206ENST00000403542 ISCUQ9H1K1 167 aa13.05□□□□□ -0.32
RBM39-206ENST00000403542 DNAJC18Q9H819 358 aa13.05□□□□□ -0.32
RBM39-206ENST00000403542 KCNMB3Q9NPA1 279 aa13.05□□□□□ -0.32
RBM39-206ENST00000403542 RREB1Q92766 1687 aa13.05□□□□□ -0.32
RBM39-206ENST00000403542 GAKO14976 1311 aa13.05□□□□□ -0.32
RBM39-206ENST00000403542 MYH4Q9Y623 1939 aa13.05□□□□□ -0.32
RBM39-206ENST00000403542 SPDYE3A6NKU9 549 aa13.05□□□□□ -0.32
RBM39-206ENST00000403542 ORC2Q13416 577 aaPredicted RBP13.05□□□□□ -0.32
RBM39-206ENST00000403542 SF3B2Q13435 895 aaKnown RBP13.05□□□□□ -0.32
RBM39-206ENST00000403542 RC3H1Q5TC82 1133 aaKnown RBP13.05□□□□□ -0.32
RBM39-206ENST00000403542 ZNF746Q6NUN9 644 aaPredicted RBP13.05□□□□□ -0.32
RBM39-206ENST00000403542 AEBP2Q6ZN18 517 aaPredicted RBP13.05□□□□□ -0.32
RBM39-206ENST00000403542 ZC3H12CQ9C0D7 883 aaKnown RBP13.05□□□□□ -0.32
RBM39-206ENST00000403542 ATF5Q9Y2D1 282 aaPredicted RBP13.05□□□□□ -0.32
RBM39-206ENST00000403542 ASTN1O14525 1302 aa13.05□□□□□ -0.32
RBM39-206ENST00000403542 DDTLA6NHG4 134 aaPredicted RBP13.04□□□□□ -0.32
RBM39-206ENST00000403542 hCG_1984214I3L0E3 225 aa13.04□□□□□ -0.32
RBM39-206ENST00000403542 KRT13P13646 458 aa13.04□□□□□ -0.32
RBM39-206ENST00000403542 EPHA7Q15375 998 aa13.04□□□□□ -0.32
RBM39-206ENST00000403542 GPATCH4Q5T3I0 446 aaKnown RBP13.04□□□□□ -0.32
RBM39-206ENST00000403542 B4GALNT4Q76KP1 1039 aa13.04□□□□□ -0.32
RBM39-206ENST00000403542 ZNF713Q8N859 430 aaPredicted RBP13.04□□□□□ -0.32
RBM39-206ENST00000403542 LNX1Q8TBB1 728 aaPredicted RBP13.04□□□□□ -0.32
RBM39-206ENST00000403542 SLC35G2Q8TBE7 412 aa13.04□□□□□ -0.32
RBM39-206ENST00000403542 IPO4Q8TEX9 1081 aaKnown RBP13.04□□□□□ -0.32
RBM39-206ENST00000403542 ARHGEF26Q96DR7 871 aa13.04□□□□□ -0.32
RBM39-206ENST00000403542 RBM17Q96I25 401 aaKnown RBP13.04□□□□□ -0.32
RBM39-206ENST00000403542 TMBIM4Q9HC24 238 aa13.04□□□□□ -0.32
RBM39-206ENST00000403542 CD248Q9HCU0 757 aa13.04□□□□□ -0.32
RBM39-206ENST00000403542 ACP6Q9NPH0 428 aa13.04□□□□□ -0.32
RBM39-206ENST00000403542 IGKV6D-41A0A0C4DH26 115 aa13.04□□□□□ -0.32
RBM39-206ENST00000403542 TISP43B9A030 160 aa13.04□□□□□ -0.32
RBM39-206ENST00000403542 DDX39AO00148 427 aaKnown RBP13.04□□□□□ -0.32
RBM39-206ENST00000403542 HSPA9P38646 679 aaKnown RBP13.04□□□□□ -0.32
RBM39-206ENST00000403542 SLCO1A2P46721 670 aa13.04□□□□□ -0.32
RBM39-206ENST00000403542 DPY19L2P1Q6NXN4 242 aa13.04□□□□□ -0.32
RBM39-206ENST00000403542 SCFD2Q8WU76 684 aa13.04□□□□□ -0.32
RBM39-206ENST00000403542 ERVK-5Q9HDB9 667 aa13.04□□□□□ -0.32
RBM39-206ENST00000403542 SIX2Q9NPC8 291 aa13.04□□□□□ -0.32
RBM39-206ENST00000403542 MSH4O15457 936 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 CFBP00751 764 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 SHBGP04278 402 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 HLA-DOAP06340 250 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 GCFC2P16383 781 aaKnown RBP13.03□□□□□ -0.32
RBM39-206ENST00000403542 PLTPP55058 493 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 SPIRE1Q08AE8 756 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms