RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 NLRX1Q86UT6 975 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 SMC5Q8IY18 1101 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 SMARCC2Q8TAQ2 1214 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 IGDCC4Q8TDY8 1250 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 CDCA3Q99618 268 aaPredicted RBP13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 POMKQ9H5K3 350 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 DIAPH3Q9NSV4 1193 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 TMEM260Q9NX78 707 aa13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 KMT2BQ9UMN6 2715 aaPredicted RBP13.67□□□□□ -0.22
SPTLC1P3-201ENST00000403408 hCG_1642624A0A1W2PR95 340 aa13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 RRN3P2A6NIE6 340 aa13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 PLEKHA8P1O95397 391 aa13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 ASGR2P07307 311 aa13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 WEE2P0C1S8 567 aa13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 NFX1Q12986 1120 aaKnown RBP13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 MTHFD1LQ6UB35 978 aa13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 FRMD5Q7Z6J6 570 aa13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 KIAA0319LQ8IZA0 1049 aa13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 CMTR1Q8N1G2 835 aaKnown RBP13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 SRBD1Q8N5C6 995 aaKnown RBP13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 GIMAP8Q8ND71 665 aaPredicted RBP13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 RASGRP4Q8TDF6 673 aa13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 ADAM2Q99965 735 aa13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 JADE2Q9NQC1 790 aa13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 RGS18Q9NS28 235 aa13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 ZBTB47Q9UFB7 747 aaPredicted RBP13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 PCDHB12Q9Y5F1 795 aa13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 ZFHX4Q86UP3 3567 aa13.66□□□□□ -0.22
SPTLC1P3-201ENST00000403408 SMIM35A0A1B0GVV1 85 aa13.65□□□□□ -0.22
SPTLC1P3-201ENST00000403408 ZBTB42B2RXF5 422 aa13.65□□□□□ -0.22
SPTLC1P3-201ENST00000403408 IGHDP01880 384 aa13.65□□□□□ -0.22
SPTLC1P3-201ENST00000403408 FAM189BP81408 668 aa13.65□□□□□ -0.22
SPTLC1P3-201ENST00000403408 FOXK2Q01167 660 aa13.65□□□□□ -0.22
SPTLC1P3-201ENST00000403408 KRT76Q01546 638 aa13.65□□□□□ -0.22
SPTLC1P3-201ENST00000403408 TRAF1Q13077 416 aa13.65□□□□□ -0.22
SPTLC1P3-201ENST00000403408 ITGB3BPQ13352 177 aaPredicted RBP13.65□□□□□ -0.22
SPTLC1P3-201ENST00000403408 MTMR1Q13613 665 aa13.65□□□□□ -0.22
SPTLC1P3-201ENST00000403408 DSC3Q14574 896 aa13.65□□□□□ -0.22
SPTLC1P3-201ENST00000403408 THNSL1Q8IYQ7 743 aa13.65□□□□□ -0.22
SPTLC1P3-201ENST00000403408 SPZ1Q9BXG8 430 aa13.65□□□□□ -0.22
SPTLC1P3-201ENST00000403408 LRFN2Q9ULH4 789 aa13.65□□□□□ -0.22
SPTLC1P3-201ENST00000403408 ST3GAL5Q9UNP4 418 aa13.65□□□□□ -0.22
SPTLC1P3-201ENST00000403408 PCDHB7Q9Y5E2 793 aa13.65□□□□□ -0.22
SPTLC1P3-201ENST00000403408 PI15O43692 258 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 ATP4AP20648 1035 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 KLRC1P26715 233 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 PDE4AP27815 886 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 NUBP1P53384 320 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 ACTR2P61160 394 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 PLCB3Q01970 1234 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 WTAPQ15007 396 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 SPOUT1Q5T280 376 aaKnown RBP13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 CWF19L1Q69YN2 538 aaKnown RBP13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 FAM228AQ86W67 206 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 CHD1LQ86WJ1 897 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 MRPS27Q92552 414 aaKnown RBP13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 CASD1Q96PB1 797 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 PPP1R16BQ96T49 567 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 TCF25Q9BQ70 676 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 IRF2BPLQ9H1B7 796 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 JPH1Q9HDC5 661 aaPredicted RBP13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 TSHZ2Q9NRE2 1034 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 AAASQ9NRG9 546 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 GINS2Q9Y248 185 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 CHD8Q9HCK8 2581 aa13.64□□□□□ -0.23
SPTLC1P3-201ENST00000403408 IGKV6D-21A0A0A0MT36 114 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 E7EWF7 191 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 ATG7O95352 703 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 CCNE2O96020 404 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 NPR3P17342 541 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 NUCB1Q02818 461 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 SLC24A5Q71RS6 500 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 PLPPR4Q7Z2D5 763 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 ZBTB33Q86T24 672 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 MB21D2Q8IYB1 491 aaPredicted RBP13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 C12orf76Q8N812 135 aaPredicted RBP13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 CUL5Q93034 780 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 CDHR1Q96JP9 859 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 PSTPIP2Q9H939 334 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 LY9Q9HBG7 655 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 KCNH7Q9NS40 1196 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 SLC9A2Q9UBY0 812 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 PCDHA6Q9UN73 950 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 SORCS3Q9UPU3 1222 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 LZTS1Q9Y250 596 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 PCDHA8Q9Y5H6 950 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 HCFC2Q9Y5Z7 792 aa13.63□□□□□ -0.23
SPTLC1P3-201ENST00000403408 M0QZ92 97 aa13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 CLASP2O75122 1294 aaKnown RBP13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 RPS6KA5O75582 802 aa13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 GSPT1P15170 499 aaKnown RBP13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 RXRAP19793 462 aa13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 STAT5BP51692 787 aa13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 KIZQ2M2Z5 673 aa13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 ASTLQ6HA08 431 aaPredicted RBP13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 PDE12Q6L8Q7 609 aaKnown RBP13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 TYW1BQ6NUM6 668 aa13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 KCNT2Q6UVM3 1135 aa13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 ZNF654Q8IZM8 581 aa13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 ADSSL1Q8N142 457 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms