RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 RCOR1Q9UKL0 485 aa19.46■□□□□ 0.71
HDAC11-202ENST00000402259 PCDHA2Q9Y5H9 948 aa19.46■□□□□ 0.71
HDAC11-202ENST00000402259 LTBP2Q14767 1821 aa19.46■□□□□ 0.71
HDAC11-202ENST00000402259 TRIM43BA6NCK2 446 aa19.45■□□□□ 0.7
HDAC11-202ENST00000402259 C22orf31O95567 290 aa19.45■□□□□ 0.7
HDAC11-202ENST00000402259 IGBP1P78318 339 aa19.45■□□□□ 0.7
HDAC11-202ENST00000402259 TRIM71Q2Q1W2 868 aaKnown RBP19.45■□□□□ 0.7
HDAC11-202ENST00000402259 FOXD4L6Q3SYB3 417 aaPredicted RBP19.45■□□□□ 0.7
HDAC11-202ENST00000402259 FOXD4L3Q6VB84 417 aaPredicted RBP19.45■□□□□ 0.7
HDAC11-202ENST00000402259 ZNF579Q8NAF0 562 aaKnown RBP19.45■□□□□ 0.7
HDAC11-202ENST00000402259 DHX38Q92620 1227 aaKnown RBP19.45■□□□□ 0.7
HDAC11-202ENST00000402259 TRIM43Q96BQ3 446 aaPredicted RBP19.45■□□□□ 0.7
HDAC11-202ENST00000402259 CEP89Q96ST8 783 aa19.45■□□□□ 0.7
HDAC11-202ENST00000402259 NOC4LQ9BVI4 516 aaKnown RBP19.45■□□□□ 0.7
HDAC11-202ENST00000402259 NT5C3AQ9H0P0 336 aa19.45■□□□□ 0.7
HDAC11-202ENST00000402259 DBR1Q9UK59 544 aaKnown RBP19.45■□□□□ 0.7
HDAC11-202ENST00000402259 DNAH12Q6ZR08 3092 aa19.45■□□□□ 0.7
HDAC11-202ENST00000402259 EVPLQ92817 2033 aa19.44■□□□□ 0.7
HDAC11-202ENST00000402259 TANC1Q9C0D5 1861 aa19.44■□□□□ 0.7
HDAC11-202ENST00000402259 SMIM35A0A1B0GVV1 85 aa19.44■□□□□ 0.7
HDAC11-202ENST00000402259 PP2D1A8MPX8 630 aa19.44■□□□□ 0.7
HDAC11-202ENST00000402259 TIMP1P01033 207 aa19.44■□□□□ 0.7
HDAC11-202ENST00000402259 CYP2C9P11712 490 aa19.44■□□□□ 0.7
HDAC11-202ENST00000402259 KLRC1P26715 233 aa19.44■□□□□ 0.7
HDAC11-202ENST00000402259 UBA7P41226 1012 aa19.44■□□□□ 0.7
HDAC11-202ENST00000402259 GRIN1Q05586 938 aa19.44■□□□□ 0.7
HDAC11-202ENST00000402259 SH3RF1Q7Z6J0 888 aa19.44■□□□□ 0.7
HDAC11-202ENST00000402259 TRAPPC12Q8WVT3 735 aa19.44■□□□□ 0.7
HDAC11-202ENST00000402259 JPH2Q9BR39 696 aaPredicted RBP19.44■□□□□ 0.7
HDAC11-202ENST00000402259 CCSER1Q9C0I3 900 aa19.44■□□□□ 0.7
HDAC11-202ENST00000402259 SCAND2PQ9GZW5 306 aaPredicted RBP19.44■□□□□ 0.7
HDAC11-202ENST00000402259 CSRNP2Q9H175 543 aa19.44■□□□□ 0.7
HDAC11-202ENST00000402259 HIPK3Q9H422 1215 aa19.44■□□□□ 0.7
HDAC11-202ENST00000402259 PRDM5Q9NQX1 630 aaPredicted RBP19.44■□□□□ 0.7
HDAC11-202ENST00000402259 CYP26B1Q9NR63 512 aa19.44■□□□□ 0.7
HDAC11-202ENST00000402259 IGKV6-21A0A0C4DH24 114 aa19.43■□□□□ 0.7
HDAC11-202ENST00000402259 CUTAO60888 179 aa19.43■□□□□ 0.7
HDAC11-202ENST00000402259 RAG1P15918 1043 aa19.43■□□□□ 0.7
HDAC11-202ENST00000402259 CDC25AP30304 524 aa19.43■□□□□ 0.7
HDAC11-202ENST00000402259 RFC5P40937 340 aa19.43■□□□□ 0.7
HDAC11-202ENST00000402259 TBC1D8BQ0IIM8 1120 aa19.43■□□□□ 0.7
HDAC11-202ENST00000402259 MTERF2Q49AM1 385 aa19.43■□□□□ 0.7
HDAC11-202ENST00000402259 POTEGQ6S5H5 508 aa19.43■□□□□ 0.7
HDAC11-202ENST00000402259 TRMT1LQ7Z2T5 733 aaKnown RBP19.43■□□□□ 0.7
HDAC11-202ENST00000402259 RSPH3Q86UC2 560 aa19.43■□□□□ 0.7
HDAC11-202ENST00000402259 CABP7Q86V35 215 aa19.43■□□□□ 0.7
HDAC11-202ENST00000402259 LINC01465Q8N7H1 131 aa19.43■□□□□ 0.7
HDAC11-202ENST00000402259 RETREG2Q8NC44 543 aa19.43■□□□□ 0.7
HDAC11-202ENST00000402259 CEP170P1Q96L14 293 aa19.43■□□□□ 0.7
HDAC11-202ENST00000402259 GAS2O43903 313 aaKnown RBP19.42■□□□□ 0.7
HDAC11-202ENST00000402259 MAFO75444 373 aaPredicted RBP19.42■□□□□ 0.7
HDAC11-202ENST00000402259 PARNO95453 639 aaKnown RBP19.42■□□□□ 0.7
HDAC11-202ENST00000402259 RARRES1P49788 294 aa19.42■□□□□ 0.7
HDAC11-202ENST00000402259 ECM1Q16610 540 aa19.42■□□□□ 0.7
HDAC11-202ENST00000402259 XKR9Q5GH70 373 aa19.42■□□□□ 0.7
HDAC11-202ENST00000402259 PLA2G4FQ68DD2 849 aa19.42■□□□□ 0.7
HDAC11-202ENST00000402259 RUFY4Q6ZNE9 571 aa19.42■□□□□ 0.7
HDAC11-202ENST00000402259 ZNF710Q8N1W2 664 aa19.42■□□□□ 0.7
HDAC11-202ENST00000402259 NME8Q8N427 588 aa19.42■□□□□ 0.7
HDAC11-202ENST00000402259 LEO1Q8WVC0 666 aaPredicted RBP19.42■□□□□ 0.7
HDAC11-202ENST00000402259 CALML4Q96GE6 196 aa19.42■□□□□ 0.7
HDAC11-202ENST00000402259 CLIC6Q96NY7 704 aa19.42■□□□□ 0.7
HDAC11-202ENST00000402259 DHX33Q9H6R0 707 aaKnown RBP19.42■□□□□ 0.7
HDAC11-202ENST00000402259 KIAA1024Q9UPX6 916 aa19.42■□□□□ 0.7
HDAC11-202ENST00000402259 CEP290O15078 2479 aa19.42■□□□□ 0.7
HDAC11-202ENST00000402259 TMEM150BA6NC51 233 aa19.41■□□□□ 0.7
HDAC11-202ENST00000402259 CKBP12277 381 aa19.41■□□□□ 0.7
HDAC11-202ENST00000402259 NCLP19338 710 aaKnown RBP19.41■□□□□ 0.7
HDAC11-202ENST00000402259 TMOD1P28289 359 aa19.41■□□□□ 0.7
HDAC11-202ENST00000402259 TXLNAP40222 546 aa19.41■□□□□ 0.7
HDAC11-202ENST00000402259 NPEPPSP55786 919 aa19.41■□□□□ 0.7
HDAC11-202ENST00000402259 TMEM119Q4V9L6 283 aa19.41■□□□□ 0.7
HDAC11-202ENST00000402259 MFSD5Q6N075 450 aa19.41■□□□□ 0.7
HDAC11-202ENST00000402259 PIGOQ8TEQ8 1089 aa19.41■□□□□ 0.7
HDAC11-202ENST00000402259 WNT8BQ93098 351 aa19.41■□□□□ 0.7
HDAC11-202ENST00000402259 CDK5RAP3Q96JB5 506 aa19.41■□□□□ 0.7
HDAC11-202ENST00000402259 SPATA32Q96LK8 384 aa19.41■□□□□ 0.7
HDAC11-202ENST00000402259 CCDC43Q96MW1 224 aaKnown RBP19.41■□□□□ 0.7
HDAC11-202ENST00000402259 PNMA5Q96PV4 448 aa19.41■□□□□ 0.7
HDAC11-202ENST00000402259 DDX19AQ9NUU7 478 aaKnown RBP19.41■□□□□ 0.7
HDAC11-202ENST00000402259 ZMYND8Q9ULU4 1186 aaPredicted RBP19.41■□□□□ 0.7
HDAC11-202ENST00000402259 DNM3Q9UQ16 869 aa19.41■□□□□ 0.7
HDAC11-202ENST00000402259 ZBTB39O15060 712 aa19.4■□□□□ 0.7
HDAC11-202ENST00000402259 DGAT1O75907 488 aa19.4■□□□□ 0.7
HDAC11-202ENST00000402259 EYA4O95677 639 aa19.4■□□□□ 0.7
HDAC11-202ENST00000402259 SELPP16109 830 aa19.4■□□□□ 0.7
HDAC11-202ENST00000402259 ME1P48163 572 aa19.4■□□□□ 0.7
HDAC11-202ENST00000402259 GRB10Q13322 594 aa19.4■□□□□ 0.7
HDAC11-202ENST00000402259 FAM26DQ5JW98 314 aa19.4■□□□□ 0.7
HDAC11-202ENST00000402259 AXDND1Q5T1B0 1012 aaPredicted RBP19.4■□□□□ 0.7
HDAC11-202ENST00000402259 EFCAB12Q6NXP0 572 aa19.4■□□□□ 0.7
HDAC11-202ENST00000402259 SLC7A3Q8WY07 619 aa19.4■□□□□ 0.7
HDAC11-202ENST00000402259 SYMPKQ92797 1274 aaKnown RBP19.4■□□□□ 0.7
HDAC11-202ENST00000402259 PPP1R12CQ9BZL4 782 aa19.4■□□□□ 0.7
HDAC11-202ENST00000402259 PCDHA7Q9UN72 937 aa19.4■□□□□ 0.7
HDAC11-202ENST00000402259 SYN1P17600 705 aa19.39■□□□□ 0.69
HDAC11-202ENST00000402259 ITGB8P26012 769 aa19.39■□□□□ 0.69
HDAC11-202ENST00000402259 RFC2P35250 354 aa19.39■□□□□ 0.69
HDAC11-202ENST00000402259 THPOP40225 353 aa19.39■□□□□ 0.69
HDAC11-202ENST00000402259 POLGP54098 1239 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms