RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 TFRCP02786 760 aaKnown RBP17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 HOXA13P31271 388 aaPredicted RBP17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 RPS6P62753 249 aaKnown RBP17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 VSNL1P62760 191 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 GRB10Q13322 594 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 UBE2SQ16763 222 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 NCAPH2Q6IBW4 605 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 NOA1Q8NC60 698 aaKnown RBP17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 SEMA6BQ9H3T3 888 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 A1CFQ9NQ94 594 aaKnown RBP17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 SAGE1Q9NXZ1 904 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 CYP39A1Q9NYL5 469 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 ANO9A1A5B4 782 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 PFASO15067 1338 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 FOSP01100 380 aaPredicted RBP17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 MAPK4P31152 587 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 HNRNPH3P31942 346 aaKnown RBP17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 TXKP42681 527 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 MAP2K1Q02750 393 aaPredicted RBP17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 AP3B2Q13367 1082 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 PDIA5Q14554 519 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 NSMFQ6X4W1 530 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 CDK5RAP3Q96JB5 506 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 BLOC1S4Q9NUP1 217 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 TMEM260Q9NX78 707 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 PSD3Q9NYI0 1048 aa17.57■□□□□ 0.4
CHRFAM7A-203ENST00000401522 H3BQF6 201 aa17.56■□□□□ 0.4
CHRFAM7A-203ENST00000401522 STRNO43815 780 aa17.56■□□□□ 0.4
CHRFAM7A-203ENST00000401522 KLK7P49862 253 aa17.56■□□□□ 0.4
CHRFAM7A-203ENST00000401522 BAATQ14032 418 aaPredicted RBP17.56■□□□□ 0.4
CHRFAM7A-203ENST00000401522 VWA3BQ502W6 1294 aa17.56■□□□□ 0.4
CHRFAM7A-203ENST00000401522 FOXR2Q6PJQ5 311 aa17.56■□□□□ 0.4
CHRFAM7A-203ENST00000401522 ANKRD35Q8N283 1001 aa17.56■□□□□ 0.4
CHRFAM7A-203ENST00000401522 GUF1Q8N442 669 aaKnown RBP17.56■□□□□ 0.4
CHRFAM7A-203ENST00000401522 SYTL5Q8TDW5 730 aaPredicted RBP17.56■□□□□ 0.4
CHRFAM7A-203ENST00000401522 LARP4BQ92615 738 aaKnown RBP17.56■□□□□ 0.4
CHRFAM7A-203ENST00000401522 EXOC4Q96A65 974 aa17.56■□□□□ 0.4
CHRFAM7A-203ENST00000401522 PNMA5Q96PV4 448 aa17.56■□□□□ 0.4
CHRFAM7A-203ENST00000401522 PURBQ96QR8 312 aaKnown RBP17.56■□□□□ 0.4
CHRFAM7A-203ENST00000401522 ACBD3Q9H3P7 528 aa17.56■□□□□ 0.4
CHRFAM7A-203ENST00000401522 MYMKA6NI61 221 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 ATP1A1P05023 1023 aaKnown RBP17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 MCM6Q14566 821 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 ABRAQ8N0Z2 381 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 RBBP6Q7Z6E9 1792 aaKnown RBP17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 PCNTO95613 3336 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 TARSL2A2RTX5 802 aaKnown RBP17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 SPDYE3A6NKU9 549 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 VAV2P52735 878 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 LRRC63Q05C16 580 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 PSMD2Q13200 908 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 KCTD2Q14681 263 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 SPA17Q15506 151 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 SLC30A10Q6XR72 485 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 GPR142Q7Z601 462 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 RAD54LQ92698 747 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 MMP19Q99542 508 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 PDE11AQ9HCR9 933 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 SLC39A2Q9NP94 309 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 COL20A1Q9P218 1284 aa17.55■□□□□ 0.4
CHRFAM7A-203ENST00000401522 ENC1O14682 589 aa17.54■□□□□ 0.4
CHRFAM7A-203ENST00000401522 KIF5AQ12840 1032 aa17.54■□□□□ 0.4
CHRFAM7A-203ENST00000401522 MAN2A1Q16706 1144 aa17.54■□□□□ 0.4
CHRFAM7A-203ENST00000401522 TMEM119Q4V9L6 283 aa17.54■□□□□ 0.4
CHRFAM7A-203ENST00000401522 WDR78Q5VTH9 848 aa17.54■□□□□ 0.4
CHRFAM7A-203ENST00000401522 CCDC42Q96M95 316 aa17.54■□□□□ 0.4
CHRFAM7A-203ENST00000401522 HDAC6Q9UBN7 1215 aa17.54■□□□□ 0.4
CHRFAM7A-203ENST00000401522 DNAJC25-GNG10A0A024R161 153 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 CASP8Q14790 479 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 MAP9Q49MG5 647 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 KRT79Q5XKE5 535 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 IQCEQ6IPM2 695 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 PLEKHH3Q7Z736 793 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 EEF2KMTQ96G04 330 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 LACRTQ9GZZ8 138 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 NDST4Q9H3R1 872 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 PLAGL2Q9UPG8 496 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 SIK3Q9Y2K2 1263 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 IVNS1ABPQ9Y6Y0 642 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 RCCD1A6NED2 376 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 SLC37A4O43826 429 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 USO1O60763 962 aaKnown RBP17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 PPP4R3AQ6IN85 833 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 SECISBP2LQ93073 1101 aaKnown RBP17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 HPS3Q969F9 1004 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 MMS19Q96T76 1030 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 TSG101Q99816 390 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 ANO3Q9BYT9 981 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 ADAM21Q9UKJ8 722 aa17.53■□□□□ 0.4
CHRFAM7A-203ENST00000401522 TDP2O95551 362 aa17.52■□□□□ 0.4
CHRFAM7A-203ENST00000401522 LACTBP83111 547 aaPredicted RBP17.52■□□□□ 0.4
CHRFAM7A-203ENST00000401522 SP3Q02447 781 aa17.52■□□□□ 0.4
CHRFAM7A-203ENST00000401522 GRB14Q14449 540 aa17.52■□□□□ 0.4
CHRFAM7A-203ENST00000401522 FAM133AQ8N9E0 248 aa17.52■□□□□ 0.4
CHRFAM7A-203ENST00000401522 SNX29Q8TEQ0 813 aa17.52■□□□□ 0.4
CHRFAM7A-203ENST00000401522 CRYGNQ8WXF5 182 aa17.52■□□□□ 0.4
CHRFAM7A-203ENST00000401522 TAAR1Q96RJ0 339 aa17.52■□□□□ 0.4
CHRFAM7A-203ENST00000401522 EDEM3Q9BZQ6 932 aa17.52■□□□□ 0.4
CHRFAM7A-203ENST00000401522 VIPAS39Q9H9C1 493 aa17.52■□□□□ 0.4
CHRFAM7A-203ENST00000401522 TFR2Q9UP52 801 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms