RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 TBC1D31Q96DN5 1066 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 SLC10A4Q96EP9 437 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 A0A1B0GTH6 734 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 GOLGA8SH3BPF8 625 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 EYA4O95677 639 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 SRGAP2CP0DJJ0 459 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 PLTPP55058 493 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 KIF22Q14807 665 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 RINT1Q6NUQ1 792 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 ZBTB33Q86T24 672 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 CERKQ8TCT0 537 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 ZMYND12Q9H0C1 365 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 PTPN22Q9Y2R2 807 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 NUB1Q9Y5A7 615 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 H7C0C1 242 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 ZBTB7AO95365 584 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 ATP5OP48047 213 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 RSPH3Q86UC2 560 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 PPFIBP2Q8ND30 876 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 C7orf25Q9BPX7 421 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 LXNQ9BS40 222 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 RHOBTB3O94955 611 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 PSMC5P62195 406 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 ANKRD20A3Q5VUR7 823 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 ANKRD40Q6AI12 368 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 WHAMMQ8TF30 809 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 STMN2Q93045 179 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 CD2APQ9Y5K6 639 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 HGSO14964 777 aaPredicted RBP15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 TBX3O15119 743 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 GKAP1Q5VSY0 366 aaPredicted RBP15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 SPATS2Q86XZ4 545 aaKnown RBP15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 CLEC10AQ8IUN9 316 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 POLD4Q9HCU8 107 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 ARHGAP23Q9P227 1491 aa15.37■□□□□ 0.05
PCDHGA11-201ENST00000398587 ESYT2A0FGR8 921 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 A6NJR5 290 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 GCLMP48507 274 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 FMR1Q06787 632 aaKnown RBP eCLIP15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 KCTD16Q68DU8 428 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 NWD1Q149M9 1564 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 ATP11AP98196 1134 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 CCDC62Q6P9F0 684 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 EMBQ6PCB8 327 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 ELOA2Q8IYF1 753 aaPredicted RBP15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 NLRP4Q96MN2 994 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 RPF1Q9H9Y2 349 aaKnown RBP15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 CAPN11Q9UMQ6 739 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 USP27XA6NNY8 438 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 MIF4GDA9UHW6 222 aaKnown RBP15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 SLC16A4O15374 487 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 CIB2O75838 187 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 TROVE2P10155 538 aaKnown RBP eCLIP15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 EN1Q05925 392 aaPredicted RBP15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 CASP8Q14790 479 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 TUFT1Q9NNX1 390 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 NEDD9Q14511 834 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 GEN1Q17RS7 908 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 GLE1Q53GS7 698 aaKnown RBP15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 NLRP7Q8WX94 980 aa15.36■□□□□ 0.05
PCDHGA11-201ENST00000398587 PDXKO00764 312 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 SLC26A4O43511 780 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 CD58P19256 250 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 OSTNP61366 133 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 DHX9Q08211 1270 aaKnown RBP15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 CAPN12Q6ZSI9 719 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 FAM149B1Q96BN6 582 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 ACAD9Q9H845 621 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 ABCB6Q9NP58 842 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 ATP8A1Q9Y2Q0 1164 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 DENND3A2RUS2 1198 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 CLDN3O15551 220 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 PALMO75781 387 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 GTF2A1P52655 376 aaPredicted RBP15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 AFAP1L2Q8N4X5 818 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 KLHL14Q9P2G3 628 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 PPM1FP49593 454 aaPredicted RBP15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 ZNF131P52739 623 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 SLC12A2P55011 1212 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 RWDD2BP57060 319 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 MYO1EQ12965 1108 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 MAPK6Q16659 721 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 PNMA8AQ86V59 439 aaPredicted RBP15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 RFX6Q8HWS3 928 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 VPS52Q8N1B4 723 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 GABBR1Q9UBS5 961 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 DIS3Q9Y2L1 958 aaKnown RBP15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 FAN1Q9Y2M0 1017 aa15.35■□□□□ 0.05
PCDHGA11-201ENST00000398587 KRT1P04264 644 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 KLRK1P26718 216 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 MARK3P27448 753 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 FRMD5Q7Z6J6 570 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 ARHGAP24Q8N264 748 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 LPAR1Q92633 364 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 MCUR1Q96AQ8 359 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 AGXT2Q9BYV1 514 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 ODF2LQ9ULJ1 636 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 SCINQ9Y6U3 715 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 SGK1O00141 431 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 PNMA6AP0CW24 399 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms