RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 LBHD1Q9BQE6 289 aaPredicted RBP17.68■□□□□ 0.42
MBD1-207ENST00000398488 FAM49AQ9H0Q0 323 aaPredicted RBP17.68■□□□□ 0.42
MBD1-207ENST00000398488 TFIP11Q9UBB9 837 aaKnown RBP17.68■□□□□ 0.42
MBD1-207ENST00000398488 COL1A2P08123 1366 aa17.68■□□□□ 0.42
MBD1-207ENST00000398488 NBNO60934 754 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 CHRNA1P02708 482 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 SELPP16109 830 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 DDIT3P35638 169 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 FPGSQ05932 587 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 TMEM62Q0P6H9 643 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 DRP2Q13474 957 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 BFSP2Q13515 415 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 DTHD1Q6ZMT9 781 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 LRRC8DQ7L1W4 858 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 KIAA0319LQ8IZA0 1049 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 LINC01465Q8N7H1 131 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 CAGE1Q8TC20 777 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 ZSWIM4Q9H7M6 989 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 DAXXQ9UER7 740 aaPredicted RBP17.67■□□□□ 0.42
MBD1-207ENST00000398488 LRWD1Q9UFC0 647 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 TANC1Q9C0D5 1861 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 TET1Q8NFU7 2136 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 VWA3AA6NCI4 1184 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 LAD1O00515 517 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 MARCKSP29966 332 aaPredicted RBP17.67■□□□□ 0.42
MBD1-207ENST00000398488 MGAT3Q09327 533 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 PDIA5Q14554 519 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 POTEGQ6S5H5 508 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 DEFB128Q7Z7B8 93 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 LRRC71Q8N4P6 559 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 RETREG2Q8NC44 543 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 PIGOQ8TEQ8 1089 aa17.67■□□□□ 0.42
MBD1-207ENST00000398488 UBE2OQ9C0C9 1292 aaKnown RBP17.67■□□□□ 0.42
MBD1-207ENST00000398488 MYH15Q9Y2K3 1946 aa17.66■□□□□ 0.42
MBD1-207ENST00000398488 EVPLQ92817 2033 aa17.66■□□□□ 0.42
MBD1-207ENST00000398488 LYPLA2O95372 231 aa17.66■□□□□ 0.42
MBD1-207ENST00000398488 YWHABP31946 246 aaKnown RBP17.66■□□□□ 0.42
MBD1-207ENST00000398488 CLCN3P51790 818 aa17.66■□□□□ 0.42
MBD1-207ENST00000398488 SHHQ15465 462 aa17.66■□□□□ 0.42
MBD1-207ENST00000398488 TMEM266Q2M3C6 531 aa17.66■□□□□ 0.42
MBD1-207ENST00000398488 TMEM199Q8N511 208 aa17.66■□□□□ 0.42
MBD1-207ENST00000398488 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.66■□□□□ 0.428e-7■■□□□ 13.4
MBD1-207ENST00000398488 POLR3CQ9BUI4 534 aaPredicted RBP17.66■□□□□ 0.42
MBD1-207ENST00000398488 CDHR5Q9HBB8 845 aa17.66■□□□□ 0.42
MBD1-207ENST00000398488 BMP2KQ9NSY1 1161 aaPredicted RBP17.66■□□□□ 0.42
MBD1-207ENST00000398488 SIP14410 1827 aa17.66■□□□□ 0.42
MBD1-207ENST00000398488 SMIM35A0A1B0GVV1 85 aa17.65■□□□□ 0.42
MBD1-207ENST00000398488 RPA1P27694 616 aa17.65■□□□□ 0.42
MBD1-207ENST00000398488 BMP8BP34820 402 aa17.65■□□□□ 0.42
MBD1-207ENST00000398488 FAM26DQ5JW98 314 aa17.65■□□□□ 0.42
MBD1-207ENST00000398488 TMEM240Q5SV17 173 aa17.65■□□□□ 0.42
MBD1-207ENST00000398488 ARL6IP4Q66PJ3 421 aaKnown RBP17.65■□□□□ 0.42
MBD1-207ENST00000398488 EFCAB12Q6NXP0 572 aa17.65■□□□□ 0.42
MBD1-207ENST00000398488 TAF2Q6P1X5 1199 aa17.65■□□□□ 0.42
MBD1-207ENST00000398488 RPAINQ86UA6 219 aa17.65■□□□□ 0.42
MBD1-207ENST00000398488 TNPO1Q92973 898 aaKnown RBP17.65■□□□□ 0.42
MBD1-207ENST00000398488 PPP1R16BQ96T49 567 aa17.65■□□□□ 0.42
MBD1-207ENST00000398488 TUFT1Q9NNX1 390 aa17.65■□□□□ 0.42
MBD1-207ENST00000398488 IL23AQ9NPF7 189 aa17.65■□□□□ 0.42
MBD1-207ENST00000398488 CYP26B1Q9NR63 512 aa17.65■□□□□ 0.42
MBD1-207ENST00000398488 FBXO2Q9UK22 296 aaPredicted RBP17.65■□□□□ 0.42
MBD1-207ENST00000398488 IGKV6-21A0A0C4DH24 114 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 RSPH10B2B2RC85 870 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 RSPH10BP0C881 870 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 CCT6AP40227 531 aaKnown RBP17.64■□□□□ 0.41
MBD1-207ENST00000398488 NASPP49321 788 aaPredicted RBP17.64■□□□□ 0.41
MBD1-207ENST00000398488 USP49Q70CQ1 688 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 ZNF365Q70YC5 407 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 KCNK18Q7Z418 384 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 CCDC155Q8N6L0 562 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 METTL13Q8N6R0 699 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 NEK9Q8TD19 979 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 SNX29Q8TEQ0 813 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 LRRC15Q8TF66 581 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 ZNF668Q96K58 619 aaPredicted RBP17.64■□□□□ 0.41
MBD1-207ENST00000398488 CEP170P1Q96L14 293 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 CLIC6Q96NY7 704 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 PNMA5Q96PV4 448 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 SUGCTQ9HAC7 445 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 CEP131Q9UPN4 1083 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 CDY2AQ9Y6F7 541 aa17.64■□□□□ 0.41
MBD1-207ENST00000398488 VTNP04004 478 aa17.63■□□□□ 0.41
MBD1-207ENST00000398488 DNM1Q05193 864 aaKnown RBP17.63■□□□□ 0.41
MBD1-207ENST00000398488 PPIGQ13427 754 aaKnown RBP eCLIP17.63■□□□□ 0.417e-7■■■□□ 17.2
MBD1-207ENST00000398488 SLC39A14Q15043 492 aa17.63■□□□□ 0.41
MBD1-207ENST00000398488 XKR9Q5GH70 373 aa17.63■□□□□ 0.41
MBD1-207ENST00000398488 SPECC1Q5M775 1068 aa17.63■□□□□ 0.41
MBD1-207ENST00000398488 LINC00301Q8NCQ3 95 aa17.63■□□□□ 0.41
MBD1-207ENST00000398488 PLIN2Q99541 437 aa17.63■□□□□ 0.41
MBD1-207ENST00000398488 ARID2Q68CP9 1835 aa17.63■□□□□ 0.41
MBD1-207ENST00000398488 MAGEB2O15479 319 aa17.62■□□□□ 0.41
MBD1-207ENST00000398488 DKC1O60832 514 aaKnown RBP eCLIP17.62■□□□□ 0.41
MBD1-207ENST00000398488 MAFO75444 373 aaPredicted RBP17.62■□□□□ 0.41
MBD1-207ENST00000398488 CXCL10P02778 98 aa17.62■□□□□ 0.41
MBD1-207ENST00000398488 RARRES1P49788 294 aa17.62■□□□□ 0.41
MBD1-207ENST00000398488 MRPS6P82932 125 aaKnown RBP17.62■□□□□ 0.41
MBD1-207ENST00000398488 TBC1D8BQ0IIM8 1120 aa17.62■□□□□ 0.41
MBD1-207ENST00000398488 GRB10Q13322 594 aa17.62■□□□□ 0.41
MBD1-207ENST00000398488 CSRNP2Q9H175 543 aa17.62■□□□□ 0.41
MBD1-207ENST00000398488 XPNPEP1Q9NQW7 623 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms