RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 KSR1Q8IVT5 923 aa20.11■□□□□ 0.81
CHRFAM7A-202ENST00000397827 MMGT1Q8N4V1 131 aa20.11■□□□□ 0.81
CHRFAM7A-202ENST00000397827 RNF10Q8N5U6 811 aaKnown RBP20.11■□□□□ 0.81
CHRFAM7A-202ENST00000397827 TYW1Q9NV66 732 aaKnown RBP20.11■□□□□ 0.81
CHRFAM7A-202ENST00000397827 ZBTB21Q9ULJ3 1066 aa20.11■□□□□ 0.81
CHRFAM7A-202ENST00000397827 PACSIN2Q9UNF0 486 aaPredicted RBP20.11■□□□□ 0.81
CHRFAM7A-202ENST00000397827 PON1P27169 355 aa20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 PTK2Q05397 1052 aa20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 ZC2HC1CQ53FD0 456 aaPredicted RBP20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 SPAG5Q96R06 1193 aa20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 VEZTQ9HBM0 779 aa20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 FBXO28Q9NVF7 368 aa20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 GCOM1H8Y6P7 765 aaPredicted RBP20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 PSMD10O75832 226 aa20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 CCDC172P0C7W6 258 aa20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 POLR2MP0CAP2 368 aa20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 NAB2Q15742 525 aa20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 CNPY4Q8N129 248 aa20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 MYCT1Q8N699 235 aa20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 SELENOOQ9BVL4 669 aa20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 GOPCQ9HD26 462 aa20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 ZNF70Q9UC06 446 aaPredicted RBP20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 HPCAL4Q9UM19 191 aa20.1■□□□□ 0.81
CHRFAM7A-202ENST00000397827 RIN2Q8WYP3 895 aaPredicted RBP20.09■□□□□ 0.81
CHRFAM7A-202ENST00000397827 EXOC4Q96A65 974 aa20.09■□□□□ 0.81
CHRFAM7A-202ENST00000397827 GLIS2Q9BZE0 524 aaPredicted RBP20.09■□□□□ 0.81
CHRFAM7A-202ENST00000397827 STK24Q9Y6E0 443 aa20.09■□□□□ 0.81
CHRFAM7A-202ENST00000397827 UTRNP46939 3433 aa20.09■□□□□ 0.81
CHRFAM7A-202ENST00000397827 ATAD5Q96QE3 1844 aa20.09■□□□□ 0.81
CHRFAM7A-202ENST00000397827 TGFB1I1O43294 461 aa20.09■□□□□ 0.81
CHRFAM7A-202ENST00000397827 DLGAP5Q15398 846 aa20.09■□□□□ 0.81
CHRFAM7A-202ENST00000397827 CCDC70Q6NSX1 233 aa20.09■□□□□ 0.81
CHRFAM7A-202ENST00000397827 ZNF572Q7Z3I7 529 aaPredicted RBP20.09■□□□□ 0.81
CHRFAM7A-202ENST00000397827 IRF2BP2Q7Z5L9 587 aa20.09■□□□□ 0.81
CHRFAM7A-202ENST00000397827 RBM46Q8TBY0 533 aaKnown RBP20.09■□□□□ 0.81
CHRFAM7A-202ENST00000397827 TMEM39BQ9GZU3 492 aa20.09■□□□□ 0.81
CHRFAM7A-202ENST00000397827 LUC7LQ9NQ29 371 aaKnown RBP20.09■□□□□ 0.81
CHRFAM7A-202ENST00000397827 WRAP73Q9P2S5 460 aaPredicted RBP20.09■□□□□ 0.81
CHRFAM7A-202ENST00000397827 FAM13AO94988 1023 aa20.08■□□□□ 0.81
CHRFAM7A-202ENST00000397827 BMT2Q1RMZ1 405 aa20.08■□□□□ 0.81
CHRFAM7A-202ENST00000397827 RSBN1LQ6PCB5 846 aaPredicted RBP20.08■□□□□ 0.81
CHRFAM7A-202ENST00000397827 GJB7Q6PEY0 223 aa20.08■□□□□ 0.81
CHRFAM7A-202ENST00000397827 ZNF571Q7Z3V5 609 aaPredicted RBP20.08■□□□□ 0.81
CHRFAM7A-202ENST00000397827 SLC35C1Q96A29 364 aa20.08■□□□□ 0.81
CHRFAM7A-202ENST00000397827 ACBD3Q9H3P7 528 aa20.08■□□□□ 0.81
CHRFAM7A-202ENST00000397827 RBM12Q9NTZ6 932 aaKnown RBP20.08■□□□□ 0.81
CHRFAM7A-202ENST00000397827 AJAP1Q9UKB5 411 aaPredicted RBP20.08■□□□□ 0.81
CHRFAM7A-202ENST00000397827 PAFAH1B1P43034 410 aa20.08■□□□□ 0.8
CHRFAM7A-202ENST00000397827 MAGEA9P43362 315 aa20.08■□□□□ 0.8
CHRFAM7A-202ENST00000397827 FAM71BQ8TC56 605 aa20.08■□□□□ 0.8
CHRFAM7A-202ENST00000397827 FAM151AQ8WW52 585 aa20.08■□□□□ 0.8
CHRFAM7A-202ENST00000397827 GAS7O60861 476 aa20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 SYF2O95926 243 aaKnown RBP20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 ARP10275 920 aa20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 EPB41P11171 864 aaKnown RBP20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 RPL13P26373 211 aaKnown RBP20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 ITIH3Q06033 890 aa20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 COG2Q14746 738 aa20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 EPHA7Q15375 998 aa20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 C1orf186Q6ZWK4 172 aa20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 VIPAS39Q9H9C1 493 aa20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 OLFML3Q9NRN5 406 aa20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 SCAF8Q9UPN6 1271 aaKnown RBP20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 CNTNAP1P78357 1384 aa20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 SUPT20HQ8NEM7 779 aa20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 RANBP17Q9H2T7 1088 aaKnown RBP20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 PLEKHA4Q9H4M7 779 aa20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 PLCB1Q9NQ66 1216 aa20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 ZC3H4Q9UPT8 1303 aaKnown RBP20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 ZMYM2Q9UBW7 1377 aa20.07■□□□□ 0.8
CHRFAM7A-202ENST00000397827 ACTN2P35609 894 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 RNASE9P60153 205 aaKnown RBP20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 CEP55Q53EZ4 464 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 SLC5A5Q92911 643 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 TUFT1Q9NNX1 390 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 ZNF277Q9NRM2 450 aaPredicted RBP20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 GCNT4Q9P109 453 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 COL2A1P02458 1487 aaPredicted RBP20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 PPP2R5CQ13362 524 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 OGFOD1Q8N543 542 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 ZNF577Q9BSK1 485 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 GOLPH3Q9H4A6 298 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 MED4Q9NPJ6 270 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 SYNPO2Q9UMS6 1093 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 RNF40O75150 1001 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 PRELPP51888 382 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 PTPROQ16827 1216 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 CHURC1Q8WUH1 139 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 UNC45AQ9H3U1 944 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 VCPKMTQ9H867 229 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 SIX2Q9NPC8 291 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 PKD2L1Q9P0L9 805 aa20.06■□□□□ 0.8
CHRFAM7A-202ENST00000397827 DDX39AO00148 427 aaKnown RBP20.05■□□□□ 0.8
CHRFAM7A-202ENST00000397827 GAP43P17677 238 aa20.05■□□□□ 0.8
CHRFAM7A-202ENST00000397827 CFAP221Q4G0U5 840 aa20.05■□□□□ 0.8
CHRFAM7A-202ENST00000397827 GBP6Q6ZN66 633 aa20.05■□□□□ 0.8
CHRFAM7A-202ENST00000397827 LARGE2Q8N3Y3 721 aa20.05■□□□□ 0.8
CHRFAM7A-202ENST00000397827 AENQ8WTP8 325 aaKnown RBP20.05■□□□□ 0.8
CHRFAM7A-202ENST00000397827 PDGFDQ9GZP0 370 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms