RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 LAMC2Q13753 1193 aa18.88■□□□□ 0.61
TSPAN4-205ENST00000397406 DHX8Q14562 1220 aaKnown RBP18.88■□□□□ 0.61
TSPAN4-205ENST00000397406 SNX17Q15036 470 aa18.88■□□□□ 0.61
TSPAN4-205ENST00000397406 SLC39A5Q6ZMH5 540 aa18.88■□□□□ 0.61
TSPAN4-205ENST00000397406 ARRDC4Q8NCT1 418 aa18.88■□□□□ 0.61
TSPAN4-205ENST00000397406 PIGOQ8TEQ8 1089 aa18.88■□□□□ 0.61
TSPAN4-205ENST00000397406 SPATA33Q96N06 139 aa18.88■□□□□ 0.61
TSPAN4-205ENST00000397406 PCYT2Q99447 389 aa18.88■□□□□ 0.61
TSPAN4-205ENST00000397406 TRIM9Q9C026 710 aa18.88■□□□□ 0.61
TSPAN4-205ENST00000397406 GNEQ9Y223 722 aaKnown RBP18.88■□□□□ 0.61
TSPAN4-205ENST00000397406 MYADML2A6NDP7 307 aa18.87■□□□□ 0.61
TSPAN4-205ENST00000397406 STBD1O95210 358 aa18.87■□□□□ 0.61
TSPAN4-205ENST00000397406 TCF7P36402 384 aaPredicted RBP18.87■□□□□ 0.61
TSPAN4-205ENST00000397406 CCSAPQ6IQ19 270 aaPredicted RBP18.87■□□□□ 0.61
TSPAN4-205ENST00000397406 CNNM4Q6P4Q7 775 aa18.87■□□□□ 0.61
TSPAN4-205ENST00000397406 AFAP1L1Q8TED9 768 aa18.87■□□□□ 0.61
TSPAN4-205ENST00000397406 ATP6V0A1Q93050 837 aa18.87■□□□□ 0.61
TSPAN4-205ENST00000397406 SMARCE1Q969G3 411 aa18.87■□□□□ 0.61
TSPAN4-205ENST00000397406 BHMT2Q9H2M3 363 aa18.87■□□□□ 0.61
TSPAN4-205ENST00000397406 XPNPEP3Q9NQH7 507 aa18.87■□□□□ 0.61
TSPAN4-205ENST00000397406 ZNF302Q9NR11 478 aa18.87■□□□□ 0.61
TSPAN4-205ENST00000397406 MAFBQ9Y5Q3 323 aaPredicted RBP18.87■□□□□ 0.61
TSPAN4-205ENST00000397406 NOP56O00567 594 aaKnown RBP18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 BACH1O14867 736 aa18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 DKC1O60832 514 aaKnown RBP eCLIP18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 LGR5O75473 907 aa18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 SMC2O95347 1197 aa18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 XRCC6P12956 609 aaKnown RBP eCLIP18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 CYP11B2P19099 503 aa18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 TYRO3Q06418 890 aa18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 SASS6Q6UVJ0 657 aa18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 PPTC7Q8NI37 304 aa18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 LRCH3Q96II8 777 aa18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 LRRC27Q9C0I9 530 aa18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 DBR1Q9UK59 544 aaKnown RBP18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 FAM184BQ9ULE4 1060 aa18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 PHF24Q9UPV7 400 aa18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 MYH11P35749 1972 aa18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 EMSYQ7Z589 1322 aa18.86■□□□□ 0.61
TSPAN4-205ENST00000397406 A0A1W2PPC1 479 aa18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 KLRC4O43908 158 aa18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 MYCNP04198 464 aaPredicted RBP18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 SSBP05455 408 aaKnown RBP eCLIP18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 RARBP10826 455 aa18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 AKR1A1P14550 325 aa18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 ATP4AP20648 1035 aa18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 YWHABP31946 246 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 PRKCEQ02156 737 aa18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 TRIM60Q495X7 471 aa18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 ARSHQ5FYA8 562 aa18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 GPBP1Q86WP2 473 aa18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 KLHDC9Q8NEP7 349 aa18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 OR6J1Q8NGC5 347 aa18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 GSDMAQ96QA5 445 aa18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 ANKEF1Q9NU02 776 aa18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 MAN1B1Q9UKM7 699 aa18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 SYNRGQ9UMZ2 1314 aa18.85■□□□□ 0.61
TSPAN4-205ENST00000397406 KBTBD13C9JR72 458 aa18.84■□□□□ 0.61
TSPAN4-205ENST00000397406 BIN1O00499 593 aa18.84■□□□□ 0.61
TSPAN4-205ENST00000397406 RPN1P04843 607 aaKnown RBP18.84■□□□□ 0.61
TSPAN4-205ENST00000397406 CCDC192P0DO97 292 aa18.84■□□□□ 0.61
TSPAN4-205ENST00000397406 HOXD8P13378 290 aaPredicted RBP18.84■□□□□ 0.61
TSPAN4-205ENST00000397406 RARRES1P49788 294 aa18.84■□□□□ 0.61
TSPAN4-205ENST00000397406 FAM160B1Q5W0V3 765 aa18.84■□□□□ 0.61
TSPAN4-205ENST00000397406 ANO5Q75V66 913 aa18.84■□□□□ 0.61
TSPAN4-205ENST00000397406 AFG1LQ8WV93 481 aa18.84■□□□□ 0.61
TSPAN4-205ENST00000397406 DDX12PQ92771 950 aa18.84■□□□□ 0.61
TSPAN4-205ENST00000397406 DNAJC19Q96DA6 116 aa18.84■□□□□ 0.61
TSPAN4-205ENST00000397406 Q9Y3F1 56 aa18.84■□□□□ 0.61
TSPAN4-205ENST00000397406 TMEM150BA6NC51 233 aa18.83■□□□□ 0.61
TSPAN4-205ENST00000397406 STAT5BP51692 787 aa18.83■□□□□ 0.61
TSPAN4-205ENST00000397406 MORC3Q14149 939 aa18.83■□□□□ 0.61
TSPAN4-205ENST00000397406 RINT1Q6NUQ1 792 aa18.83■□□□□ 0.61
TSPAN4-205ENST00000397406 DYMQ7RTS9 669 aa18.83■□□□□ 0.61
TSPAN4-205ENST00000397406 GAS2L3Q86XJ1 694 aa18.83■□□□□ 0.61
TSPAN4-205ENST00000397406 RUSC1Q9BVN2 902 aa18.83■□□□□ 0.61
TSPAN4-205ENST00000397406 ATP11BQ9Y2G3 1177 aa18.83■□□□□ 0.61
TSPAN4-205ENST00000397406 NPHP3-ACAD11A0A0J9YXS1 232 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 TRIM43BA6NCK2 446 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 OATP04181 439 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 MMP3P08254 477 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 BMP6P22004 513 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 ITGB8P26012 769 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 NLRP12P59046 1061 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 ASIC1P78348 528 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 KCNB1Q14721 858 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 STX1AQ16623 288 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 XKR3Q5GH77 459 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 UTP14CQ5TAP6 766 aaKnown RBP18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 C1orf53Q5VUE5 145 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 PLA2G4FQ68DD2 849 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 C1orf186Q6ZWK4 172 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 PLPPR4Q7Z2D5 763 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 TLK2Q86UE8 772 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 TRIM50Q86XT4 487 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 TRIML1Q8N9V2 468 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 TRIM43Q96BQ3 446 aaPredicted RBP18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 TSPY26PQ9H489 355 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 AZI2Q9H6S1 392 aa18.83■□□□□ 0.6
TSPAN4-205ENST00000397406 PVALEFA0A1B0GWK0 134 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms