RNA–Protein interactions for RNA: ENST00000397305.3

RBFOX2-204, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 5

Gene RBFOX2, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-204ENST00000397305 VCX3AQ9NNX9 186 aa11.65□□□□□ -0.54
RBFOX2-204ENST00000397305 GJB4Q9NTQ9 266 aa11.65□□□□□ -0.54
RBFOX2-204ENST00000397305 FAM198AQ9UFP1 575 aa11.65□□□□□ -0.54
RBFOX2-204ENST00000397305 PCDHAC2Q9Y5I4 1007 aa11.65□□□□□ -0.54
RBFOX2-204ENST00000397305 SQORQ9Y6N5 450 aa11.65□□□□□ -0.54
RBFOX2-204ENST00000397305 LTBP3Q9NS15 1303 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 BRCA1P38398 1863 aaKnown RBP11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 FER1L6Q2WGJ9 1857 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 KIF28PB7ZC32 967 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 TCP10L2B9ZVM9 353 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 NDUFAB1O14561 156 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 TTLL1O95922 423 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 HSPA8P11142 646 aaKnown RBP11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 SCG2P13521 617 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 ENDOUP21128 410 aaKnown RBP11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 S100A1P23297 94 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 SHMT1P34896 483 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 KRT2P35908 639 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 MLH1P40692 756 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 ETF1P62495 437 aaKnown RBP11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 MRPS35P82673 323 aaKnown RBP11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 CXCL9Q07325 125 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 KIF5AQ12840 1032 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 COX10Q12887 443 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 ZBTB17Q13105 803 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 CAMK2BQ13554 666 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 CERKLQ49MI3 558 aaPredicted RBP11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 BEND6Q5SZJ8 279 aaPredicted RBP11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 CCSAPQ6IQ19 270 aaPredicted RBP11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 CYB5D1Q6P9G0 228 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 NOSTRINQ8IVI9 506 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 DRC7Q8IY82 874 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 SRBD1Q8N5C6 995 aaKnown RBP11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 GDAP1Q8TB36 358 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 SH3TC2Q8TF17 1288 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 FRS2Q8WU20 508 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 IRGQQ8WZA9 623 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 NR1H4Q96RI1 486 aaPredicted RBP11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 GMLQ99445 158 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 SGIP1Q9BQI5 828 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 CLK4Q9HAZ1 481 aaKnown RBP11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 POLR3EQ9NVU0 708 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 DCAF16Q9NXF7 216 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 MTMR4Q9NYA4 1195 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 VPS54Q9P1Q0 977 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 KIAA1468Q9P260 1216 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 ZNF70Q9UC06 446 aaPredicted RBP11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 SEC63Q9UGP8 760 aaKnown RBP11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 RCOR1Q9UKL0 485 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 L1RE1Q9UN81 338 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 KCNJ14Q9UNX9 436 aa11.64□□□□□ -0.55
RBFOX2-204ENST00000397305 COL2A1P02458 1487 aaPredicted RBP11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 hCG_1642624A0A1W2PR95 340 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 CLRN2A0PK11 232 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 DDTLA6NHG4 134 aaPredicted RBP11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 NFKBIEO00221 500 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 LSM1O15116 133 aaKnown RBP11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 SPTLC2O15270 562 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 ACTN4O43707 911 aaKnown RBP11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 SGTAO43765 313 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 HSPA1AP0DMV8 641 aaKnown RBP11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 HSPA1BP0DMV9 641 aaKnown RBP11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 RPS12P25398 132 aaKnown RBP11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 CALML3P27482 149 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 PTGER2P43116 358 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 CD97P48960 835 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 CTCFP49711 727 aaPredicted RBP11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 FUT2Q10981 343 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 ASPRV1Q53RT3 343 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 PPP1R15BQ5SWA1 713 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 ANO1Q5XXA6 986 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 ZFPM1Q8IX07 1006 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 ESX1Q8N693 406 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 MSANTD4Q8NCY6 345 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 CCDC148Q8NFR7 591 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 RASSF8Q8NHQ8 419 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 DEPTORQ8TB45 409 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 RRP36Q96EU6 259 aaKnown RBP11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 EPSTI1Q96J88 318 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 PRMT6Q96LA8 375 aaPredicted RBP11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 RNPC3Q96LT9 517 aaKnown RBP11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 CLIC6Q96NY7 704 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 CSRNP1Q96S65 589 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 CABP5Q9NP86 173 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 DDX19AQ9NUU7 478 aaKnown RBP11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 MAP3K20Q9NYL2 800 aaKnown RBP11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 IMPACTQ9P2X3 320 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 DIS3Q9Y2L1 958 aaKnown RBP11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 SCINQ9Y6U3 715 aa11.63□□□□□ -0.55
RBFOX2-204ENST00000397305 COL4A5P29400 1685 aa11.62□□□□□ -0.55
RBFOX2-204ENST00000397305 KLRF2D3W0D1 207 aa11.62□□□□□ -0.55
RBFOX2-204ENST00000397305 UBE2Q2LH0YL09 131 aa11.62□□□□□ -0.55
RBFOX2-204ENST00000397305 EIF3HO15372 352 aaKnown RBP eCLIP11.62□□□□□ -0.55
RBFOX2-204ENST00000397305 GFPT2O94808 682 aa11.62□□□□□ -0.55
RBFOX2-204ENST00000397305 PRPF6O94906 941 aaKnown RBP11.62□□□□□ -0.55
RBFOX2-204ENST00000397305 LMNB1P20700 586 aa11.62□□□□□ -0.55
RBFOX2-204ENST00000397305 TNNI2P48788 182 aa11.62□□□□□ -0.55
RBFOX2-204ENST00000397305 CCNG1P51959 295 aa11.62□□□□□ -0.55
RBFOX2-204ENST00000397305 CDK17Q00537 523 aa11.62□□□□□ -0.55
RBFOX2-204ENST00000397305 RASSF7Q02833 373 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms