RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 FAM43BQ6ZT52 329 aaPredicted RBP16.39■□□□□ 0.21
SEC13-208ENST00000397109 FAM184AQ8NB25 1140 aa16.39■□□□□ 0.21
SEC13-208ENST00000397109 MYLIPQ8WY64 445 aa16.39■□□□□ 0.21
SEC13-208ENST00000397109 GJA10Q969M2 543 aa16.39■□□□□ 0.21
SEC13-208ENST00000397109 ZBTB10Q96DT7 871 aa16.39■□□□□ 0.21
SEC13-208ENST00000397109 C8orf76Q96K31 380 aa16.39■□□□□ 0.21
SEC13-208ENST00000397109 MICAL3Q7RTP6 2002 aa16.39■□□□□ 0.21
SEC13-208ENST00000397109 EVPLQ92817 2033 aa16.39■□□□□ 0.21
SEC13-208ENST00000397109 ZBTB42B2RXF5 422 aa16.38■□□□□ 0.21
SEC13-208ENST00000397109 ZNF862O60290 1169 aa16.38■□□□□ 0.21
SEC13-208ENST00000397109 GJB5O95377 273 aa16.38■□□□□ 0.21
SEC13-208ENST00000397109 OATP04181 439 aa16.38■□□□□ 0.21
SEC13-208ENST00000397109 MYOGP15173 224 aa16.38■□□□□ 0.21
SEC13-208ENST00000397109 FOSL2P15408 326 aa16.38■□□□□ 0.21
SEC13-208ENST00000397109 FOSBP53539 338 aa16.38■□□□□ 0.21
SEC13-208ENST00000397109 PRKCEQ02156 737 aa16.38■□□□□ 0.21
SEC13-208ENST00000397109 PPP2R5CQ13362 524 aa16.38■□□□□ 0.21
SEC13-208ENST00000397109 MKRN4PQ13434 485 aaPredicted RBP16.38■□□□□ 0.21
SEC13-208ENST00000397109 LPIN1Q14693 890 aa16.38■□□□□ 0.21
SEC13-208ENST00000397109 TSHZ1Q6ZSZ6 1077 aa16.38■□□□□ 0.21
SEC13-208ENST00000397109 SLFN12Q8IYM2 578 aa16.38■□□□□ 0.21
SEC13-208ENST00000397109 GAS2L1Q99501 681 aaPredicted RBP16.38■□□□□ 0.21
SEC13-208ENST00000397109 RAD9AQ99638 391 aa16.38■□□□□ 0.21
SEC13-208ENST00000397109 CELF4Q9BZC1 486 aaKnown RBP16.38■□□□□ 0.21
SEC13-208ENST00000397109 KDM3AQ9Y4C1 1321 aa16.38■□□□□ 0.21
SEC13-208ENST00000397109 DKC1O60832 514 aaKnown RBP eCLIP16.37■□□□□ 0.21
SEC13-208ENST00000397109 CA3P07451 260 aa16.37■□□□□ 0.21
SEC13-208ENST00000397109 TMOD1P28289 359 aa16.37■□□□□ 0.21
SEC13-208ENST00000397109 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.37■□□□□ 0.214e-12■■■■■ 32
SEC13-208ENST00000397109 TRMT1LQ7Z2T5 733 aaKnown RBP16.37■□□□□ 0.21
SEC13-208ENST00000397109 KIAA0319LQ8IZA0 1049 aa16.37■□□□□ 0.21
SEC13-208ENST00000397109 ZNF710Q8N1W2 664 aa16.37■□□□□ 0.21
SEC13-208ENST00000397109 OSBPL7Q9BZF2 842 aa16.37■□□□□ 0.21
SEC13-208ENST00000397109 KIF3AQ9Y496 699 aa16.37■□□□□ 0.21
SEC13-208ENST00000397109 FAM205CA6NFA0 338 aa16.36■□□□□ 0.21
SEC13-208ENST00000397109 C22orf31O95567 290 aa16.36■□□□□ 0.21
SEC13-208ENST00000397109 UGCGQ16739 394 aa16.36■□□□□ 0.21
SEC13-208ENST00000397109 XKR3Q5GH77 459 aa16.36■□□□□ 0.21
SEC13-208ENST00000397109 MYOCDQ8IZQ8 938 aa16.36■□□□□ 0.21
SEC13-208ENST00000397109 METTL13Q8N6R0 699 aa16.36■□□□□ 0.21
SEC13-208ENST00000397109 FBXO18Q8NFZ0 1043 aa16.36■□□□□ 0.21
SEC13-208ENST00000397109 HAS1Q92839 578 aa16.36■□□□□ 0.21
SEC13-208ENST00000397109 PRDM12Q9H4Q4 367 aa16.36■□□□□ 0.21
SEC13-208ENST00000397109 VAV3Q9UKW4 847 aa16.36■□□□□ 0.21
SEC13-208ENST00000397109 INSL6Q9Y581 213 aa16.36■□□□□ 0.21
SEC13-208ENST00000397109 HSP90AA1P07900 732 aaKnown RBP16.35■□□□□ 0.21
SEC13-208ENST00000397109 DDIT3P35638 169 aa16.35■□□□□ 0.21
SEC13-208ENST00000397109 PSMC5P62195 406 aa16.35■□□□□ 0.21
SEC13-208ENST00000397109 GUCY1B3Q02153 619 aa16.35■□□□□ 0.21
SEC13-208ENST00000397109 TMEM62Q0P6H9 643 aa16.35■□□□□ 0.21
SEC13-208ENST00000397109 ODR4Q5SWX8 454 aa16.35■□□□□ 0.21
SEC13-208ENST00000397109 POTEDQ86YR6 584 aa16.35■□□□□ 0.21
SEC13-208ENST00000397109 TOP1MTQ969P6 601 aa16.35■□□□□ 0.21
SEC13-208ENST00000397109 INTS4Q96HW7 963 aaKnown RBP16.35■□□□□ 0.21
SEC13-208ENST00000397109 FTHL17Q9BXU8 183 aa16.35■□□□□ 0.21
SEC13-208ENST00000397109 NIFKQ9BYG3 293 aaKnown RBP16.35■□□□□ 0.21
SEC13-208ENST00000397109 FOXP1Q9H334 677 aaPredicted RBP16.35■□□□□ 0.21
SEC13-208ENST00000397109 PTPRSQ13332 1948 aa16.35■□□□□ 0.21
SEC13-208ENST00000397109 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.35■□□□□ 0.21
SEC13-208ENST00000397109 P4HBP07237 508 aaKnown RBP16.35■□□□□ 0.21
SEC13-208ENST00000397109 QARSP47897 775 aaKnown RBP16.35■□□□□ 0.21
SEC13-208ENST00000397109 TAP1Q03518 808 aa16.35■□□□□ 0.21
SEC13-208ENST00000397109 TBC1D8BQ0IIM8 1120 aa16.35■□□□□ 0.21
SEC13-208ENST00000397109 EPHA7Q15375 998 aa16.35■□□□□ 0.21
SEC13-208ENST00000397109 CALCRLQ16602 461 aa16.35■□□□□ 0.21
SEC13-208ENST00000397109 EFCAB12Q6NXP0 572 aa16.35■□□□□ 0.21
SEC13-208ENST00000397109 MAP7D2Q96T17 732 aa16.35■□□□□ 0.21
SEC13-208ENST00000397109 AGO3Q9H9G7 860 aaKnown RBP16.35■□□□□ 0.21
SEC13-208ENST00000397109 EML1O00423 815 aa16.34■□□□□ 0.21
SEC13-208ENST00000397109 NEMFO60524 1076 aa16.34■□□□□ 0.21
SEC13-208ENST00000397109 CD52P31358 61 aa16.34■□□□□ 0.21
SEC13-208ENST00000397109 CRYBB1P53674 252 aaPredicted RBP16.34■□□□□ 0.21
SEC13-208ENST00000397109 HTRA4P83105 476 aaPredicted RBP16.34■□□□□ 0.21
SEC13-208ENST00000397109 PAK2Q13177 524 aa16.34■□□□□ 0.21
SEC13-208ENST00000397109 GNL2Q13823 731 aaKnown RBP16.34■□□□□ 0.21
SEC13-208ENST00000397109 TARBP2Q15633 366 aaKnown RBP16.34■□□□□ 0.21
SEC13-208ENST00000397109 NFKBIBQ15653 356 aa16.34■□□□□ 0.21
SEC13-208ENST00000397109 FAM117BQ6P1L5 589 aa16.34■□□□□ 0.21
SEC13-208ENST00000397109 TMCO2Q7Z6W1 182 aaPredicted RBP16.34■□□□□ 0.21
SEC13-208ENST00000397109 MAFAQ8NHW3 353 aaPredicted RBP16.34■□□□□ 0.21
SEC13-208ENST00000397109 SEPT9Q9UHD8 586 aaPredicted RBP16.34■□□□□ 0.21
SEC13-208ENST00000397109 PADI3Q9ULW8 664 aa16.34■□□□□ 0.21
SEC13-208ENST00000397109 PCDHA12Q9UN75 941 aa16.34■□□□□ 0.21
SEC13-208ENST00000397109 SIP14410 1827 aa16.34■□□□□ 0.21
SEC13-208ENST00000397109 CHD9Q3L8U1 2897 aa16.33■□□□□ 0.2
SEC13-208ENST00000397109 DDX11L8A8MPP1 907 aa16.33■□□□□ 0.2
SEC13-208ENST00000397109 ENPP3O14638 875 aa16.33■□□□□ 0.2
SEC13-208ENST00000397109 ORC2Q13416 577 aaPredicted RBP16.33■□□□□ 0.2
SEC13-208ENST00000397109 LINC01465Q8N7H1 131 aa16.33■□□□□ 0.2
SEC13-208ENST00000397109 BANK1Q8NDB2 785 aa16.33■□□□□ 0.2
SEC13-208ENST00000397109 JPH2Q9BR39 696 aaPredicted RBP16.33■□□□□ 0.2
SEC13-208ENST00000397109 AKT3Q9Y243 479 aa16.33■□□□□ 0.2
SEC13-208ENST00000397109 GINS2Q9Y248 185 aa16.33■□□□□ 0.2
SEC13-208ENST00000397109 PPME1Q9Y570 386 aa16.33■□□□□ 0.2
SEC13-208ENST00000397109 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.33■□□□□ 0.2
SEC13-208ENST00000397109 LOXHD1Q8IVV2 1947 aa16.33■□□□□ 0.2
SEC13-208ENST00000397109 TTC3P53804 2025 aa16.32■□□□□ 0.2
SEC13-208ENST00000397109 COL6A3P12111 3177 aa16.32■□□□□ 0.2
SEC13-208ENST00000397109 GPR182O15218 404 aa16.32■□□□□ 0.2
SEC13-208ENST00000397109 RPS6KA5O75582 802 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms