RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 SRPRBQ9Y5M8 271 aaKnown RBP21.48■■□□□ 1.03
HOXA9-202ENST00000396345 MORC2Q9Y6X9 1032 aaPredicted RBP21.48■■□□□ 1.03
HOXA9-202ENST00000396345 UMODL1Q5DID0 1318 aa21.48■■□□□ 1.03
HOXA9-202ENST00000396345 YEATS4O95619 227 aa21.47■■□□□ 1.03
HOXA9-202ENST00000396345 MUTP22033 750 aa21.47■■□□□ 1.03
HOXA9-202ENST00000396345 CYP2C18P33260 490 aa21.47■■□□□ 1.03
HOXA9-202ENST00000396345 LONP1P36776 959 aaKnown RBP21.47■■□□□ 1.03
HOXA9-202ENST00000396345 TARBP2Q15633 366 aaKnown RBP21.47■■□□□ 1.03
HOXA9-202ENST00000396345 TRIM71Q2Q1W2 868 aaKnown RBP21.47■■□□□ 1.03
HOXA9-202ENST00000396345 PLA2G4FQ68DD2 849 aa21.47■■□□□ 1.03
HOXA9-202ENST00000396345 TAF2Q6P1X5 1199 aa21.47■■□□□ 1.03
HOXA9-202ENST00000396345 RETREG2Q8NC44 543 aa21.47■■□□□ 1.03
HOXA9-202ENST00000396345 LBHD1Q9BQE6 289 aaPredicted RBP21.47■■□□□ 1.03
HOXA9-202ENST00000396345 SH2D3AQ9BRG2 576 aa21.47■■□□□ 1.03
HOXA9-202ENST00000396345 FBXO2Q9UK22 296 aaPredicted RBP21.47■■□□□ 1.03
HOXA9-202ENST00000396345 PITPNM1O00562 1244 aa21.46■■□□□ 1.03
HOXA9-202ENST00000396345 ZBTB39O15060 712 aa21.46■■□□□ 1.03
HOXA9-202ENST00000396345 SPTLC2O15270 562 aa21.46■■□□□ 1.03
HOXA9-202ENST00000396345 MAGEB2O15479 319 aa21.46■■□□□ 1.03
HOXA9-202ENST00000396345 C22orf31O95567 290 aa21.46■■□□□ 1.03
HOXA9-202ENST00000396345 THPOP40225 353 aa21.46■■□□□ 1.03
HOXA9-202ENST00000396345 GRIN1Q05586 938 aa21.46■■□□□ 1.03
HOXA9-202ENST00000396345 RBL2Q08999 1139 aa21.46■■□□□ 1.03
HOXA9-202ENST00000396345 TBC1D8BQ0IIM8 1120 aa21.46■■□□□ 1.03
HOXA9-202ENST00000396345 POTEGQ6S5H5 508 aa21.46■■□□□ 1.03
HOXA9-202ENST00000396345 BADQ92934 168 aa21.46■■□□□ 1.03
HOXA9-202ENST00000396345 CEP170P1Q96L14 293 aa21.46■■□□□ 1.03
HOXA9-202ENST00000396345 NACC1Q96RE7 527 aa21.46■■□□□ 1.03
HOXA9-202ENST00000396345 MMTAG2Q9BU76 263 aaKnown RBP21.46■■□□□ 1.03
HOXA9-202ENST00000396345 CYP26B1Q9NR63 512 aa21.46■■□□□ 1.03
HOXA9-202ENST00000396345 ANKEF1Q9NU02 776 aa21.46■■□□□ 1.03
HOXA9-202ENST00000396345 CIZ1Q9ULV3 898 aaPredicted RBP21.46■■□□□ 1.03
HOXA9-202ENST00000396345 SMIM35A0A1B0GVV1 85 aa21.45■■□□□ 1.02
HOXA9-202ENST00000396345 CKBP12277 381 aa21.45■■□□□ 1.02
HOXA9-202ENST00000396345 XRCC6P12956 609 aaKnown RBP eCLIP21.45■■□□□ 1.02
HOXA9-202ENST00000396345 CCL23P55773 120 aa21.45■■□□□ 1.02
HOXA9-202ENST00000396345 NPEPPSP55786 919 aa21.45■■□□□ 1.02
HOXA9-202ENST00000396345 ECM1Q16610 540 aa21.45■■□□□ 1.02
HOXA9-202ENST00000396345 XKR9Q5GH70 373 aa21.45■■□□□ 1.02
HOXA9-202ENST00000396345 MFSD5Q6N075 450 aa21.45■■□□□ 1.02
HOXA9-202ENST00000396345 RSPH3Q86UC2 560 aa21.45■■□□□ 1.02
HOXA9-202ENST00000396345 KRI1Q8N9T8 703 aaKnown RBP21.45■■□□□ 1.02
HOXA9-202ENST00000396345 PIGOQ8TEQ8 1089 aa21.45■■□□□ 1.02
HOXA9-202ENST00000396345 DNAJB3Q8WWF6 145 aa21.45■■□□□ 1.02
HOXA9-202ENST00000396345 CEP89Q96ST8 783 aa21.45■■□□□ 1.02
HOXA9-202ENST00000396345 FAM49AQ9H0Q0 323 aaPredicted RBP21.45■■□□□ 1.02
HOXA9-202ENST00000396345 CSRNP2Q9H175 543 aa21.45■■□□□ 1.02
HOXA9-202ENST00000396345 KIAA1024Q9UPX6 916 aa21.45■■□□□ 1.02
HOXA9-202ENST00000396345 PPME1Q9Y570 386 aa21.45■■□□□ 1.02
HOXA9-202ENST00000396345 LTBP2Q14767 1821 aa21.45■■□□□ 1.02
HOXA9-202ENST00000396345 A0A087WWV3 80 aa21.44■■□□□ 1.02
HOXA9-202ENST00000396345 CAND2O75155 1236 aa21.44■■□□□ 1.02
HOXA9-202ENST00000396345 PPP6R2O75170 966 aa21.44■■□□□ 1.02
HOXA9-202ENST00000396345 SELPP16109 830 aa21.44■■□□□ 1.02
HOXA9-202ENST00000396345 NCLP19338 710 aaKnown RBP21.44■■□□□ 1.02
HOXA9-202ENST00000396345 UBA7P41226 1012 aa21.44■■□□□ 1.02
HOXA9-202ENST00000396345 KRT85P78386 507 aa21.44■■□□□ 1.02
HOXA9-202ENST00000396345 MDM2Q00987 491 aaPredicted RBP21.44■■□□□ 1.02
HOXA9-202ENST00000396345 ZRSR1Q15695 479 aaKnown RBP21.44■■□□□ 1.02
HOXA9-202ENST00000396345 CABP7Q86V35 215 aa21.44■■□□□ 1.02
HOXA9-202ENST00000396345 TMEM199Q8N511 208 aa21.44■■□□□ 1.02
HOXA9-202ENST00000396345 METTL13Q8N6R0 699 aa21.44■■□□□ 1.02
HOXA9-202ENST00000396345 ZNF579Q8NAF0 562 aaKnown RBP21.44■■□□□ 1.02
HOXA9-202ENST00000396345 CCDC43Q96MW1 224 aaKnown RBP21.44■■□□□ 1.02
HOXA9-202ENST00000396345 CLIC6Q96NY7 704 aa21.44■■□□□ 1.02
HOXA9-202ENST00000396345 WNT8AQ9H1J5 351 aa21.44■■□□□ 1.02
HOXA9-202ENST00000396345 DDX19AQ9NUU7 478 aaKnown RBP21.44■■□□□ 1.02
HOXA9-202ENST00000396345 EVPLQ92817 2033 aa21.44■■□□□ 1.02
HOXA9-202ENST00000396345 RPLP2P05387 115 aaKnown RBP21.43■■□□□ 1.02
HOXA9-202ENST00000396345 MAGEA10P43363 369 aaPredicted RBP21.43■■□□□ 1.02
HOXA9-202ENST00000396345 ZNF618Q5T7W0 954 aa21.43■■□□□ 1.02
HOXA9-202ENST00000396345 EFCAB12Q6NXP0 572 aa21.43■■□□□ 1.02
HOXA9-202ENST00000396345 RPAINQ86UA6 219 aa21.43■■□□□ 1.02
HOXA9-202ENST00000396345 EXOC8Q8IYI6 725 aa21.43■■□□□ 1.02
HOXA9-202ENST00000396345 KCNG4Q8TDN1 519 aa21.43■■□□□ 1.02
HOXA9-202ENST00000396345 SUGCTQ9HAC7 445 aa21.43■■□□□ 1.02
HOXA9-202ENST00000396345 KDM3AQ9Y4C1 1321 aa21.43■■□□□ 1.02
HOXA9-202ENST00000396345 SLC26A4O43511 780 aa21.42■■□□□ 1.02
HOXA9-202ENST00000396345 MAFO75444 373 aaPredicted RBP21.42■■□□□ 1.02
HOXA9-202ENST00000396345 IQCF3P0C7M6 154 aa21.42■■□□□ 1.02
HOXA9-202ENST00000396345 TMOD1P28289 359 aa21.42■■□□□ 1.02
HOXA9-202ENST00000396345 RFC5P40937 340 aa21.42■■□□□ 1.02
HOXA9-202ENST00000396345 FPGSQ05932 587 aa21.42■■□□□ 1.02
HOXA9-202ENST00000396345 SPECC1Q5M775 1068 aa21.42■■□□□ 1.02
HOXA9-202ENST00000396345 HYIQ5T013 277 aa21.42■■□□□ 1.02
HOXA9-202ENST00000396345 ARID2Q68CP9 1835 aa21.42■■□□□ 1.02
HOXA9-202ENST00000396345 LRRC8DQ7L1W4 858 aa21.42■■□□□ 1.02
HOXA9-202ENST00000396345 KIAA0319LQ8IZA0 1049 aa21.42■■□□□ 1.02
HOXA9-202ENST00000396345 NME8Q8N427 588 aa21.42■■□□□ 1.02
HOXA9-202ENST00000396345 SCLYQ96I15 445 aa21.42■■□□□ 1.02
HOXA9-202ENST00000396345 CDK5RAP3Q96JB5 506 aa21.42■■□□□ 1.02
HOXA9-202ENST00000396345 CHAMP1Q96JM3 812 aa21.42■■□□□ 1.02
HOXA9-202ENST00000396345 JPH2Q9BR39 696 aaPredicted RBP21.42■■□□□ 1.02
HOXA9-202ENST00000396345 DBR1Q9UK59 544 aaKnown RBP21.42■■□□□ 1.02
HOXA9-202ENST00000396345 RCOR1Q9UKL0 485 aa21.42■■□□□ 1.02
HOXA9-202ENST00000396345 IGKV6-21A0A0C4DH24 114 aa21.41■■□□□ 1.02
HOXA9-202ENST00000396345 RSPH10B2B2RC85 870 aa21.41■■□□□ 1.02
HOXA9-202ENST00000396345 CTSHP09668 335 aa21.41■■□□□ 1.02
HOXA9-202ENST00000396345 RSPH10BP0C881 870 aa21.41■■□□□ 1.02
HOXA9-202ENST00000396345 CSF2RAP15509 400 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms