RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 Q9Y3F1 56 aa17.11■□□□□ 0.33
VAMP1-202ENST00000396308 A0A087WWV3 80 aa17.1■□□□□ 0.33
VAMP1-202ENST00000396308 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.1■□□□□ 0.33
VAMP1-202ENST00000396308 SMTNL1A8MU46 457 aa17.1■□□□□ 0.33
VAMP1-202ENST00000396308 USO1O60763 962 aaKnown RBP17.1■□□□□ 0.33
VAMP1-202ENST00000396308 LGR5O75473 907 aa17.1■□□□□ 0.33
VAMP1-202ENST00000396308 GUCY2CP25092 1073 aa17.1■□□□□ 0.33
VAMP1-202ENST00000396308 MRE11P49959 708 aa17.1■□□□□ 0.33
VAMP1-202ENST00000396308 RAD51AP2Q09MP3 1159 aa17.1■□□□□ 0.33
VAMP1-202ENST00000396308 COASYQ13057 564 aa17.1■□□□□ 0.33
VAMP1-202ENST00000396308 STXBP4Q6ZWJ1 553 aa17.1■□□□□ 0.33
VAMP1-202ENST00000396308 TRMT1LQ7Z2T5 733 aaKnown RBP17.1■□□□□ 0.33
VAMP1-202ENST00000396308 RNF214Q8ND24 703 aa17.1■□□□□ 0.33
VAMP1-202ENST00000396308 MCPH1Q8NEM0 835 aa17.1■□□□□ 0.33
VAMP1-202ENST00000396308 ZNF296Q8WUU4 475 aaPredicted RBP17.1■□□□□ 0.33
VAMP1-202ENST00000396308 AFG1LQ8WV93 481 aa17.1■□□□□ 0.33
VAMP1-202ENST00000396308 BBXQ8WY36 941 aaPredicted RBP17.1■□□□□ 0.33
VAMP1-202ENST00000396308 ANP32BQ92688 251 aaKnown RBP17.1■□□□□ 0.33
VAMP1-202ENST00000396308 BPIFA3Q9BQP9 254 aa17.1■□□□□ 0.33
VAMP1-202ENST00000396308 RUSC1Q9BVN2 902 aa17.1■□□□□ 0.33
VAMP1-202ENST00000396308 SEL1LQ9UBV2 794 aa17.1■□□□□ 0.33
VAMP1-202ENST00000396308 PSMA7O14818 248 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 KLRC4O43908 158 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 ADCY3O60266 1144 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 DGAT1O75907 488 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 CYBAP13498 195 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 CNGA1P29973 690 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 RFC5P40937 340 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 POLGP54098 1239 aaPredicted RBP17.09■□□□□ 0.33
VAMP1-202ENST00000396308 MTERF2Q49AM1 385 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 HERC4Q5GLZ8 1057 aaPredicted RBP17.09■□□□□ 0.33
VAMP1-202ENST00000396308 FAM26FQ5R3K3 315 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 PRAMEF19Q5SWL8 479 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 PLA2G4FQ68DD2 849 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 C11orf57Q6ZUT1 292 aaPredicted RBP17.09■□□□□ 0.33
VAMP1-202ENST00000396308 GAS2L3Q86XJ1 694 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 SLAIN1Q8ND83 568 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 DNAJC19Q96DA6 116 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 JPH2Q9BR39 696 aaPredicted RBP17.09■□□□□ 0.33
VAMP1-202ENST00000396308 GRPEL1Q9HAV7 217 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 ATP6V0A4Q9HBG4 840 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 PARVGQ9HBI0 331 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 CYP26B1Q9NR63 512 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 TRPC6Q9Y210 931 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 SYNRGQ9UMZ2 1314 aa17.09■□□□□ 0.33
VAMP1-202ENST00000396308 DYNC1LI2O43237 492 aaPredicted RBP17.08■□□□□ 0.32
VAMP1-202ENST00000396308 ZNF862O60290 1169 aa17.08■□□□□ 0.32
VAMP1-202ENST00000396308 PPFIA4O75335 1185 aa17.08■□□□□ 0.32
VAMP1-202ENST00000396308 LGALS2P05162 132 aa17.08■□□□□ 0.32
VAMP1-202ENST00000396308 MMP3P08254 477 aa17.08■□□□□ 0.32
VAMP1-202ENST00000396308 ERCC5P28715 1186 aaPredicted RBP17.08■□□□□ 0.32
VAMP1-202ENST00000396308 GIT2Q14161 759 aa17.08■□□□□ 0.32
VAMP1-202ENST00000396308 GJC2Q5T442 439 aaPredicted RBP17.08■□□□□ 0.32
VAMP1-202ENST00000396308 C1orf186Q6ZWK4 172 aa17.08■□□□□ 0.32
VAMP1-202ENST00000396308 ANO5Q75V66 913 aa17.08■□□□□ 0.32
VAMP1-202ENST00000396308 SLC17A8Q8NDX2 589 aa17.08■□□□□ 0.32
VAMP1-202ENST00000396308 PXYLP1Q8TE99 480 aa17.08■□□□□ 0.32
VAMP1-202ENST00000396308 ATP8B4Q8TF62 1192 aa17.08■□□□□ 0.32
VAMP1-202ENST00000396308 SLC7A3Q8WY07 619 aa17.08■□□□□ 0.32
VAMP1-202ENST00000396308 RBSNQ9H1K0 784 aa17.08■□□□□ 0.32
VAMP1-202ENST00000396308 LARSQ9P2J5 1176 aaKnown RBP17.08■□□□□ 0.32
VAMP1-202ENST00000396308 NPHP3-ACAD11A0A0J9YXS1 232 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 FSD2A1L4K1 749 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 ZBTB39O15060 712 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 ZEB2O60315 1214 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 HBP1O60381 514 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 HIP1RO75146 1068 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 DUSP11O75319 330 aaKnown RBP17.07■□□□□ 0.32
VAMP1-202ENST00000396308 IGHA2P01877 340 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 RARBP10826 455 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 MARK3P27448 753 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 MYL5Q02045 173 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 CACNB1Q02641 598 aaPredicted RBP17.07■□□□□ 0.32
VAMP1-202ENST00000396308 PAK1Q13153 545 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 TPD52L1Q16890 204 aaPredicted RBP17.07■□□□□ 0.32
VAMP1-202ENST00000396308 UVSSAQ2YD98 709 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 ARSHQ5FYA8 562 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 KLHL10Q6JEL2 608 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 MYCT1Q8N699 235 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 AOPEPQ8N6M6 819 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 KIFAP3Q92845 792 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 NIFKQ9BYG3 293 aaKnown RBP17.07■□□□□ 0.32
VAMP1-202ENST00000396308 CBX8Q9HC52 389 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 KCNG1Q9UIX4 513 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 GNEQ9Y223 722 aaKnown RBP17.07■□□□□ 0.32
VAMP1-202ENST00000396308 KAT6AQ92794 2004 aa17.07■□□□□ 0.32
VAMP1-202ENST00000396308 COL1A2P08123 1366 aa17.06■□□□□ 0.32
VAMP1-202ENST00000396308 BICDL2A1A5D9 508 aa17.06■□□□□ 0.32
VAMP1-202ENST00000396308 FRMD3A2A2Y4 597 aa17.06■□□□□ 0.32
VAMP1-202ENST00000396308 SEPT4O43236 478 aa17.06■□□□□ 0.32
VAMP1-202ENST00000396308 GAS2O43903 313 aaKnown RBP17.06■□□□□ 0.32
VAMP1-202ENST00000396308 KPNA6O60684 536 aa17.06■□□□□ 0.32
VAMP1-202ENST00000396308 PRKAR2AP13861 404 aaKnown RBP17.06■□□□□ 0.32
VAMP1-202ENST00000396308 ELNP15502 786 aa17.06■□□□□ 0.32
VAMP1-202ENST00000396308 NPEPPSP55786 919 aa17.06■□□□□ 0.32
VAMP1-202ENST00000396308 TBC1D8BQ0IIM8 1120 aa17.06■□□□□ 0.32
VAMP1-202ENST00000396308 COBLL1Q53SF7 1204 aa17.06■□□□□ 0.32
VAMP1-202ENST00000396308 FAM102BQ5T8I3 360 aa17.06■□□□□ 0.32
VAMP1-202ENST00000396308 SFR1Q86XK3 245 aa17.06■□□□□ 0.32
VAMP1-202ENST00000396308 TRIM50Q86XT4 487 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms