RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 FMNL3Q8IVF7 1028 aa9.47□□□□□ -0.89
BDNF-204ENST00000395980 ANKS4BQ8N8V4 417 aa9.47□□□□□ -0.89
BDNF-204ENST00000395980 GLT8D2Q9H1C3 349 aa9.47□□□□□ -0.89
BDNF-204ENST00000395980 CCDC134Q9H6E4 229 aa9.47□□□□□ -0.89
BDNF-204ENST00000395980 VEZTQ9HBM0 779 aa9.47□□□□□ -0.89
BDNF-204ENST00000395980 HAUS2Q9NVX0 235 aa9.47□□□□□ -0.89
BDNF-204ENST00000395980 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.47□□□□□ -0.89
BDNF-204ENST00000395980 DAAM1Q9Y4D1 1078 aa9.47□□□□□ -0.89
BDNF-204ENST00000395980 CCT8L1PA6NM43 557 aa9.46□□□□□ -0.89
BDNF-204ENST00000395980 PDXKO00764 312 aa9.46□□□□□ -0.89
BDNF-204ENST00000395980 ENOX2Q16206 610 aaKnown RBP9.46□□□□□ -0.89
BDNF-204ENST00000395980 SPRED3Q2MJR0 410 aa9.46□□□□□ -0.89
BDNF-204ENST00000395980 ATP8B4Q8TF62 1192 aa9.46□□□□□ -0.89
BDNF-204ENST00000395980 CUL5Q93034 780 aa9.46□□□□□ -0.89
BDNF-204ENST00000395980 ZNF317Q96PQ6 595 aaPredicted RBP9.46□□□□□ -0.89
BDNF-204ENST00000395980 CARD9Q9H257 536 aa9.46□□□□□ -0.89
BDNF-204ENST00000395980 GPR75-ASB3A0A0A6YYF3 556 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 F8W031 263 aaPredicted RBP9.46□□□□□ -0.9
BDNF-204ENST00000395980 PPIP5K2O43314 1243 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 CALUO43852 315 aaPredicted RBP9.46□□□□□ -0.9
BDNF-204ENST00000395980 TRIM37O94972 964 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 SSBP05455 408 aaKnown RBP eCLIP9.46□□□□□ -0.9
BDNF-204ENST00000395980 XRCC5P13010 732 aaKnown RBP9.46□□□□□ -0.9
BDNF-204ENST00000395980 ITGA4P13612 1032 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 SLC9A1P19634 815 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 RIPK1Q13546 671 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 DHX34Q14147 1143 aaKnown RBP9.46□□□□□ -0.9
BDNF-204ENST00000395980 BMT2Q1RMZ1 405 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 FAM228AQ86W67 206 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 COA7Q96BR5 231 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 UBA5Q9GZZ9 404 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 SAP30BPQ9UHR5 308 aaKnown RBP9.46□□□□□ -0.9
BDNF-204ENST00000395980 ARFGEF1Q9Y6D6 1849 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 GOLGA6L10A0A0M3HER8 536 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 CCDC169A6NNP5 214 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 MARCH6O60337 910 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 MMP13P45452 471 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 DIXDC1Q155Q3 683 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 KNOP1Q1ED39 458 aaKnown RBP9.46□□□□□ -0.9
BDNF-204ENST00000395980 DUPD1Q68J44 220 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 CRELD2Q6UXH1 353 aaPredicted RBP9.46□□□□□ -0.9
BDNF-204ENST00000395980 EPM2AIP1Q7L775 607 aaPredicted RBP9.46□□□□□ -0.9
BDNF-204ENST00000395980 RBM46Q8TBY0 533 aaKnown RBP9.46□□□□□ -0.9
BDNF-204ENST00000395980 RFFLQ8WZ73 363 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 TMEM109Q9BVC6 243 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 SIX2Q9NPC8 291 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 TBC1D7Q9P0N9 293 aa9.46□□□□□ -0.9
BDNF-204ENST00000395980 CFAP73A6NFT4 308 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 E9PMD0 336 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 TMEM253P0C7T8 217 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 ACTN1P12814 892 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 HSPA6P17066 643 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 LMNB1P20700 586 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 SLC12A3P55017 1021 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 DAAM2Q86T65 1068 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 NEK9Q8TD19 979 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 DHX36Q9H2U1 1008 aaKnown RBP9.45□□□□□ -0.9
BDNF-204ENST00000395980 PABPC3Q9H361 631 aaKnown RBP9.45□□□□□ -0.9
BDNF-204ENST00000395980 GOLPH3Q9H4A6 298 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 ZDHHC18Q9NUE0 388 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 KIAA1024Q9UPX6 916 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 STK24Q9Y6E0 443 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 COL16A1Q07092 1604 aaPredicted RBP9.45□□□□□ -0.9
BDNF-204ENST00000395980 DDX3XO00571 662 aaKnown RBP eCLIP9.45□□□□□ -0.9
BDNF-204ENST00000395980 RPL13P26373 211 aaKnown RBP9.45□□□□□ -0.9
BDNF-204ENST00000395980 BTDP43251 543 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 MSL1Q68DK7 614 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 MOXD1Q6UVY6 613 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 ZNF804AQ7Z570 1209 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 PIGWQ7Z7B1 504 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 MBOAT7Q96N66 472 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 ERP44Q9BS26 406 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 KCNMB3Q9NPA1 279 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 CNOT7Q9UIV1 285 aaKnown RBP9.45□□□□□ -0.9
BDNF-204ENST00000395980 RASAL2Q9UJF2 1139 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 SLC12A4Q9UP95 1085 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 THRAP3Q9Y2W1 955 aaKnown RBP9.45□□□□□ -0.9
BDNF-204ENST00000395980 CNTNAP4Q9C0A0 1308 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 PHF20L1A8MW92 1017 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 DCDC2CA8MYV0 355 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 CTNND1O60716 968 aaKnown RBP9.45□□□□□ -0.9
BDNF-204ENST00000395980 KRT18P05783 430 aaKnown RBP9.45□□□□□ -0.9
BDNF-204ENST00000395980 PPATQ06203 517 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 BTNL9Q6UXG8 535 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 COL23A1Q86Y22 540 aaPredicted RBP9.45□□□□□ -0.9
BDNF-204ENST00000395980 TEX11Q8IYF3 940 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 SLC30A5Q8TAD4 765 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 CCHCR1Q8TD31 782 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 STMN4Q9H169 189 aaPredicted RBP9.45□□□□□ -0.9
BDNF-204ENST00000395980 KANSL2Q9H9L4 492 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 TYW1Q9NV66 732 aaKnown RBP9.45□□□□□ -0.9
BDNF-204ENST00000395980 MTMR4Q9NYA4 1195 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 SUFUQ9UMX1 484 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 JAG2Q9Y219 1238 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 ATF5Q9Y2D1 282 aaPredicted RBP9.45□□□□□ -0.9
BDNF-204ENST00000395980 FOCADQ5VW36 1801 aa9.45□□□□□ -0.9
BDNF-204ENST00000395980 CYP3A7-CYP3A51PA0A087WV96 503 aa9.44□□□□□ -0.9
BDNF-204ENST00000395980 DDX3YO15523 660 aaKnown RBP9.44□□□□□ -0.9
BDNF-204ENST00000395980 AGTP01019 485 aa9.44□□□□□ -0.9
BDNF-204ENST00000395980 CYP3A7P24462 503 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms