RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 ASMTLO95671 621 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 PYGMP11217 842 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 FDPSP14324 419 aaKnown RBP10.49□□□□□ -0.73
CDRT1-204ENST00000395906 CHN1P15882 459 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 SERPINB8P50452 374 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 PMS2P54278 862 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 GCKRQ14397 625 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 UAP1Q16222 522 aaPredicted RBP10.49□□□□□ -0.73
CDRT1-204ENST00000395906 C3orf62Q6ZUJ4 267 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 ZC3H18Q86VM9 953 aaKnown RBP10.49□□□□□ -0.73
CDRT1-204ENST00000395906 SPATA24Q86W54 205 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 PALB2Q86YC2 1186 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 RBM46Q8TBY0 533 aaKnown RBP10.49□□□□□ -0.73
CDRT1-204ENST00000395906 NAT14Q8WUY8 206 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 TAF4BQ92750 862 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 SRPK1Q96SB4 655 aaKnown RBP10.49□□□□□ -0.73
CDRT1-204ENST00000395906 HNRNPABQ99729 332 aaKnown RBP10.49□□□□□ -0.73
CDRT1-204ENST00000395906 RXFP1Q9HBX9 757 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 RABL2AQ9UBK7 228 aaPredicted RBP10.49□□□□□ -0.73
CDRT1-204ENST00000395906 LIMA1Q9UHB6 759 aaKnown RBP10.49□□□□□ -0.73
CDRT1-204ENST00000395906 TRIM33Q9UPN9 1127 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 ZNF711Q9Y462 761 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 RFX7Q2KHR2 1363 aa10.49□□□□□ -0.73
CDRT1-204ENST00000395906 DCDC2CA8MYV0 355 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 SART1O43290 800 aaKnown RBP10.48□□□□□ -0.73
CDRT1-204ENST00000395906 SHBGP04278 402 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 NFKBIAP25963 317 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 CRKLP46109 303 aaKnown RBP10.48□□□□□ -0.73
CDRT1-204ENST00000395906 PDE6CP51160 858 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 SF3A3Q12874 501 aaKnown RBP eCLIP10.48□□□□□ -0.73
CDRT1-204ENST00000395906 CFAP221Q4G0U5 840 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 NFRKBQ6P4R8 1299 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 AGGF1Q8N302 714 aaeCLIP10.48□□□□□ -0.73
CDRT1-204ENST00000395906 DIS3LQ8TF46 1054 aaKnown RBP10.48□□□□□ -0.73
CDRT1-204ENST00000395906 DDX12PQ92771 950 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 UTP4Q969X6 686 aaKnown RBP10.48□□□□□ -0.73
CDRT1-204ENST00000395906 NACC2Q96BF6 587 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 SH3GL1Q99961 368 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 LRRC2Q9BYS8 371 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 NCOA5Q9HCD5 579 aaKnown RBP10.48□□□□□ -0.73
CDRT1-204ENST00000395906 SMARCAL1Q9NZC9 954 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 CTDP1Q9Y5B0 961 aaPredicted RBP10.48□□□□□ -0.73
CDRT1-204ENST00000395906 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.48□□□□□ -0.73
CDRT1-204ENST00000395906 PALLDQ8WX93 1383 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 GLI3P10071 1580 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 DOT1LQ8TEK3 1739 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 TAF5LO75529 589 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 ETS2P15036 469 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 VAV1P15498 845 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 GNAT2P19087 354 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 TCF7P36402 384 aaPredicted RBP10.48□□□□□ -0.73
CDRT1-204ENST00000395906 HALP42357 657 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 SH3D19Q5HYK7 790 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 FAAH2Q6GMR7 532 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 OTUD7BQ6GQQ9 843 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 PHLDB3Q6NSJ2 640 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 RSPH3Q86UC2 560 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 AMIGO3Q86WK7 504 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 CLASRPQ8N2M8 674 aaKnown RBP10.48□□□□□ -0.73
CDRT1-204ENST00000395906 KRI1Q8N9T8 703 aaKnown RBP10.48□□□□□ -0.73
CDRT1-204ENST00000395906 RETREG2Q8NC44 543 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 ANKK1Q8NFD2 765 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 FAM89AQ96GI7 184 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 DCLRE1BQ9H816 532 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.48□□□□□ -0.73
CDRT1-204ENST00000395906 KIAA1522Q9P206 1035 aaPredicted RBP10.48□□□□□ -0.73
CDRT1-204ENST00000395906 GGT7Q9UJ14 662 aa10.48□□□□□ -0.73
CDRT1-204ENST00000395906 NWD2Q9ULI1 1742 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 TBC1D12O60347 775 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 SERPINB3P29508 390 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 CCT8P50990 548 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 RTP1P59025 263 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 CYLC2Q14093 348 aaPredicted RBP10.47□□□□□ -0.73
CDRT1-204ENST00000395906 TTLL12Q14166 644 aaPredicted RBP10.47□□□□□ -0.73
CDRT1-204ENST00000395906 KRT71Q3SY84 523 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 CCDC153Q494R4 210 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 ZC2HC1CQ53FD0 456 aaPredicted RBP10.47□□□□□ -0.73
CDRT1-204ENST00000395906 KANK3Q6NY19 840 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 POTEEQ6S8J3 1075 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 DHX32Q7L7V1 743 aaKnown RBP10.47□□□□□ -0.73
CDRT1-204ENST00000395906 PLBD2Q8NHP8 589 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 NELFBQ8WX92 580 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 ZNF274Q96GC6 653 aaPredicted RBP10.47□□□□□ -0.73
CDRT1-204ENST00000395906 MPP4Q96JB8 637 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 CGREF1Q99674 301 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 ETNK1Q9HBU6 452 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 TXLNGQ9NUQ3 528 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 EHD2Q9NZN4 543 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 BTBD7Q9P203 1132 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 PNMA3Q9UL41 463 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 RPL26L1Q9UNX3 145 aaKnown RBP10.47□□□□□ -0.73
CDRT1-204ENST00000395906 TBC1D30Q9Y2I9 924 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 DUSP10Q9Y6W6 482 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 BOLA2-SMG1P6H3BVE0 249 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 UNC5CO95185 931 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 RASA1P20936 1047 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 CDK7P50613 346 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 KIF23Q02241 960 aaPredicted RBP10.47□□□□□ -0.73
CDRT1-204ENST00000395906 CAMK2BQ13554 666 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 CUL1Q13616 776 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms