RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 SPATA20Q8TB22 786 aa9.49□□□□□ -0.89
HERC4-203ENST00000395185 MTRQ99707 1265 aa9.49□□□□□ -0.89
HERC4-203ENST00000395185 PYM1Q9BRP8 204 aaKnown RBP9.49□□□□□ -0.89
HERC4-203ENST00000395185 ZNF577Q9BSK1 485 aa9.49□□□□□ -0.89
HERC4-203ENST00000395185 POLR3CQ9BUI4 534 aaPredicted RBP9.49□□□□□ -0.89
HERC4-203ENST00000395185 RAB34Q9BZG1 259 aa9.49□□□□□ -0.89
HERC4-203ENST00000395185 MTIF3Q9H2K0 278 aaKnown RBP9.49□□□□□ -0.89
HERC4-203ENST00000395185 HIPK3Q9H422 1215 aa9.49□□□□□ -0.89
HERC4-203ENST00000395185 LRWD1Q9UFC0 647 aa9.49□□□□□ -0.89
HERC4-203ENST00000395185 GRIN2DO15399 1336 aa9.49□□□□□ -0.89
HERC4-203ENST00000395185 MKI67P46013 3256 aaKnown RBP9.49□□□□□ -0.89
HERC4-203ENST00000395185 H3BRB1 525 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 POLR2DO15514 142 aaKnown RBP9.48□□□□□ -0.89
HERC4-203ENST00000395185 B4GALT4O60513 344 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 LYPLA2O95372 231 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 CCNE2O96020 404 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 MUTP22033 750 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 RPA1P27694 616 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 UBA7P41226 1012 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 SARSP49591 514 aaKnown RBP9.48□□□□□ -0.89
HERC4-203ENST00000395185 ZNF445P59923 1031 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 SP4Q02446 784 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 EPHA7Q15375 998 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 ECM1Q16610 540 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 PTGISQ16647 500 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 KIAA0753Q2KHM9 967 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 TMEM266Q2M3C6 531 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 HSDL1Q3SXM5 330 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 CCDC183Q5T5S1 534 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 UTP14CQ5TAP6 766 aaKnown RBP9.48□□□□□ -0.89
HERC4-203ENST00000395185 LRCH2Q5VUJ6 765 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 CNNM4Q6P4Q7 775 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 SESTD1Q86VW0 696 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 IQUBQ8NA54 791 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 RDM1Q8NG50 284 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 GLG1Q92896 1179 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 GPR20Q99678 358 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 FUCA2Q9BTY2 467 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 PRO3102Q9H379 93 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 SMARCAD1Q9H4L7 1026 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 TUT1Q9H6E5 874 aaKnown RBP9.48□□□□□ -0.89
HERC4-203ENST00000395185 AZI2Q9H6S1 392 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 BCAS3Q9H6U6 928 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 BLOC1S4Q9NUP1 217 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 KBTBD4Q9NVX7 518 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 TBX21Q9UL17 535 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 BRCA2P51587 3418 aa9.48□□□□□ -0.89
HERC4-203ENST00000395185 LCTP09848 1927 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 IGKV6D-21A0A0A0MT36 114 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 POTEMA6NI47 508 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 GAS7O60861 476 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 SLITRK3O94933 977 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 LETM1O95202 739 aaPredicted RBP9.47□□□□□ -0.89
HERC4-203ENST00000395185 PARNO95453 639 aaKnown RBP9.47□□□□□ -0.89
HERC4-203ENST00000395185 FGBP02675 491 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 HOXD8P13378 290 aaPredicted RBP9.47□□□□□ -0.89
HERC4-203ENST00000395185 KARSQ15046 597 aaKnown RBP9.47□□□□□ -0.89
HERC4-203ENST00000395185 NT5DC1Q5TFE4 455 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 ZNF746Q6NUN9 644 aaPredicted RBP9.47□□□□□ -0.89
HERC4-203ENST00000395185 CAVIN1Q6NZI2 390 aaKnown RBP9.47□□□□□ -0.89
HERC4-203ENST00000395185 CABP7Q86V35 215 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 CATSPER3Q86XQ3 398 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 CAGE1Q8TC20 777 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 KAT2BQ92831 832 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 TEKT3Q9BXF9 490 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 PPP1R12CQ9BZL4 782 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 UNC45AQ9H3U1 944 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 CUEDC2Q9H467 287 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 JPH1Q9HDC5 661 aaPredicted RBP9.47□□□□□ -0.89
HERC4-203ENST00000395185 TUFT1Q9NNX1 390 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 DISC1Q9NRI5 854 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 TRMT13Q9NUP7 481 aaKnown RBP9.47□□□□□ -0.89
HERC4-203ENST00000395185 ERAP1Q9NZ08 941 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 PKD2L1Q9P0L9 805 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 SLC9A2Q9UBY0 812 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 SERTAD1Q9UHV2 236 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 TUBE1Q9UJT0 475 aa9.47□□□□□ -0.89
HERC4-203ENST00000395185 RBBP6Q7Z6E9 1792 aaKnown RBP9.47□□□□□ -0.89
HERC4-203ENST00000395185 C17orf102A2RUQ5 167 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 MARCH6O60337 910 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 KINO60870 393 aaKnown RBP9.46□□□□□ -0.9
HERC4-203ENST00000395185 MED24O75448 989 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 STBD1O95210 358 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 F2P00734 622 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 LGALS2P05162 132 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 PFKMP08237 780 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 ZNF286BP0CG31 522 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 CYP2C9P11712 490 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 ACTN1P12814 892 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 XRCC6P12956 609 aaKnown RBP eCLIP9.46□□□□□ -0.9
HERC4-203ENST00000395185 PLCG1P19174 1290 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 CYP2C18P33260 490 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 RFC2P35250 354 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 CCL23P55773 120 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 KRT76Q01546 638 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 ZSCAN23Q3MJ62 389 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 LRIT3Q3SXY7 679 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 RRAGBQ5VZM2 374 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 KRT79Q5XKE5 535 aa9.46□□□□□ -0.9
HERC4-203ENST00000395185 KANK3Q6NY19 840 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms