RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 ZNF157P51786 506 aaPredicted RBP12.85□□□□□ -0.35
RTN1-203ENST00000395090 PDIA5Q14554 519 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 PLS1Q14651 629 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 CALCRLQ16602 461 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 SPECC1Q5M775 1068 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 USP49Q70CQ1 688 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 IGSF22Q8N9C0 903 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 EPSTI1Q96J88 318 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 AK8Q96MA6 479 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 CLSTN2Q9H4D0 955 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 TXNRD2Q9NNW7 524 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 FAM13BQ9NYF5 915 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 CYP39A1Q9NYL5 469 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 FBXO40Q9UH90 709 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 KCNH3Q9ULD8 1083 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 GPC6Q9Y625 555 aaPredicted RBP12.85□□□□□ -0.35
RTN1-203ENST00000395090 IGLV3-22A0A075B6J6 115 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 MEIS1O00470 390 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 ATP4AP20648 1035 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 COPB2P35606 906 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 SYKP43405 635 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 ZNF445P59923 1031 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 RBM43Q6ZSC3 357 aaKnown RBP12.84□□□□□ -0.35
RTN1-203ENST00000395090 ELOA2Q8IYF1 753 aaPredicted RBP12.84□□□□□ -0.35
RTN1-203ENST00000395090 FAM43AQ8N2R8 423 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 TAAR1Q96RJ0 339 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 MOV10L1Q9BXT6 1211 aaKnown RBP12.84□□□□□ -0.35
RTN1-203ENST00000395090 ZCCHC17Q9NP64 241 aaKnown RBP12.84□□□□□ -0.35
RTN1-203ENST00000395090 A1CFQ9NQ94 594 aaKnown RBP12.84□□□□□ -0.35
RTN1-203ENST00000395090 MANSC4A6NHS7 340 aaPredicted RBP12.84□□□□□ -0.35
RTN1-203ENST00000395090 PEX10O60683 326 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 CYP2C8P10632 490 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 GCLCP48506 637 aaPredicted RBP12.84□□□□□ -0.35
RTN1-203ENST00000395090 INHBEP58166 350 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 FSTL1Q12841 308 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 HIF1AQ16665 826 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 CEP55Q53EZ4 464 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 PCNX4Q63HM2 1172 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 XRRA1Q6P2D8 792 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 NSMFQ6X4W1 530 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 SLC30A10Q6XR72 485 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 CYP2W1Q8TAV3 490 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 ETNPPLQ8TBG4 499 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 FAM20AQ96MK3 541 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 CCSER1Q9C0I3 900 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 NUP62CLQ9H1M0 184 aa12.84□□□□□ -0.35
RTN1-203ENST00000395090 FAM155AB1AL88 458 aaPredicted RBP12.83□□□□□ -0.36
RTN1-203ENST00000395090 CTAGE5O15320 804 aa12.83□□□□□ -0.36
RTN1-203ENST00000395090 KINO60870 393 aaKnown RBP12.83□□□□□ -0.36
RTN1-203ENST00000395090 BCRP11274 1271 aa12.83□□□□□ -0.36
RTN1-203ENST00000395090 MSX1P28360 303 aa12.83□□□□□ -0.36
RTN1-203ENST00000395090 TXKP42681 527 aa12.83□□□□□ -0.36
RTN1-203ENST00000395090 MARSP56192 900 aaKnown RBP12.83□□□□□ -0.36
RTN1-203ENST00000395090 PRR16Q569H4 304 aa12.83□□□□□ -0.36
RTN1-203ENST00000395090 NIPA1Q7RTP0 329 aa12.83□□□□□ -0.36
RTN1-203ENST00000395090 SHCBP1Q8NEM2 672 aa12.83□□□□□ -0.36
RTN1-203ENST00000395090 IFT43Q96FT9 208 aa12.83□□□□□ -0.36
RTN1-203ENST00000395090 RMDN3Q96TC7 470 aa12.83□□□□□ -0.36
RTN1-203ENST00000395090 PAGR1Q9BTK6 254 aa12.83□□□□□ -0.36
RTN1-203ENST00000395090 MROH8Q9H579 483 aa12.83□□□□□ -0.36
RTN1-203ENST00000395090 TTC12Q9H892 705 aaPredicted RBP12.83□□□□□ -0.36
RTN1-203ENST00000395090 PXMP2Q9NR77 195 aa12.83□□□□□ -0.36
RTN1-203ENST00000395090 MORF4L1Q9UBU8 362 aa12.83□□□□□ -0.36
RTN1-203ENST00000395090 PCDHA12Q9UN75 941 aa12.83□□□□□ -0.36
RTN1-203ENST00000395090 POLR2DO15514 142 aaKnown RBP12.82□□□□□ -0.36
RTN1-203ENST00000395090 ERCC3P19447 782 aa12.82□□□□□ -0.36
RTN1-203ENST00000395090 ZNF76P36508 570 aa12.82□□□□□ -0.36
RTN1-203ENST00000395090 TECP42680 631 aa12.82□□□□□ -0.36
RTN1-203ENST00000395090 ERVK-24P63145 666 aa12.82□□□□□ -0.36
RTN1-203ENST00000395090 MRPS9P82933 396 aaKnown RBP12.82□□□□□ -0.36
RTN1-203ENST00000395090 LONRF3Q496Y0 759 aa12.82□□□□□ -0.36
RTN1-203ENST00000395090 ARSJQ5FYB0 599 aaPredicted RBP12.82□□□□□ -0.36
RTN1-203ENST00000395090 ALKBH2Q6NS38 261 aa12.82□□□□□ -0.36
RTN1-203ENST00000395090 VSIG10LQ86VR7 867 aa12.82□□□□□ -0.36
RTN1-203ENST00000395090 SLFN12Q8IYM2 578 aa12.82□□□□□ -0.36
RTN1-203ENST00000395090 GPRC5AQ8NFJ5 357 aa12.82□□□□□ -0.36
RTN1-203ENST00000395090 NSUN6Q8TEA1 469 aaKnown RBP12.82□□□□□ -0.36
RTN1-203ENST00000395090 MXRA8Q9BRK3 442 aa12.82□□□□□ -0.36
RTN1-203ENST00000395090 PDCD2LQ9BRP1 358 aa12.82□□□□□ -0.36
RTN1-203ENST00000395090 TNMDQ9H2S6 317 aa12.82□□□□□ -0.36
RTN1-203ENST00000395090 USP25Q9UHP3 1055 aa12.82□□□□□ -0.36
RTN1-203ENST00000395090 DYRK1BQ9Y463 629 aa12.82□□□□□ -0.36
RTN1-203ENST00000395090 UBIAD1Q9Y5Z9 338 aa12.82□□□□□ -0.36
RTN1-203ENST00000395090 PFASO15067 1338 aa12.82□□□□□ -0.36
RTN1-203ENST00000395090 A0A087X0B3 334 aa12.81□□□□□ -0.36
RTN1-203ENST00000395090 MSH4O15457 936 aa12.81□□□□□ -0.36
RTN1-203ENST00000395090 ITGB5P18084 799 aa12.81□□□□□ -0.36
RTN1-203ENST00000395090 EIF1AXP47813 144 aaKnown RBP12.81□□□□□ -0.36
RTN1-203ENST00000395090 PGM5Q15124 567 aa12.81□□□□□ -0.36
RTN1-203ENST00000395090 CAMK4Q16566 473 aa12.81□□□□□ -0.36
RTN1-203ENST00000395090 KRBA2Q6ZNG9 492 aa12.81□□□□□ -0.36
RTN1-203ENST00000395090 NCAPG2Q86XI2 1143 aa12.81□□□□□ -0.36
RTN1-203ENST00000395090 ANKRD35Q8N283 1001 aa12.81□□□□□ -0.36
RTN1-203ENST00000395090 DNERQ8NFT8 737 aa12.81□□□□□ -0.36
RTN1-203ENST00000395090 IL31RAQ8NI17 732 aa12.81□□□□□ -0.36
RTN1-203ENST00000395090 SMCR8Q8TEV9 937 aaPredicted RBP12.81□□□□□ -0.36
RTN1-203ENST00000395090 PARK7Q99497 189 aaKnown RBP12.81□□□□□ -0.36
RTN1-203ENST00000395090 PYM1Q9BRP8 204 aaKnown RBP12.81□□□□□ -0.36
RTN1-203ENST00000395090 RAB34Q9BZG1 259 aa12.81□□□□□ -0.36
RTN1-203ENST00000395090 R3HDMLQ9H3Y0 253 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms