RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 PSMD2Q13200 908 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 TMEM143Q96AN5 459 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 DNAJC19Q96DA6 116 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 FNBP1Q96RU3 617 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 POTEB2H3BUK9 544 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 AKAP3O75969 853 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 EYA4O95677 639 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 QARSP47897 775 aaKnown RBP17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 CTNNBL1Q8WYA6 563 aaPredicted RBP17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 MXRA8Q9BRK3 442 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 ZCCHC17Q9NP64 241 aaKnown RBP17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 KMT5AQ9NQR1 393 aa17.39■□□□□ 0.37
SMARCD1-202ENST00000394963 YWHABP31946 246 aaKnown RBP17.38■□□□□ 0.37
SMARCD1-202ENST00000394963 TBX2Q13207 712 aaPredicted RBP17.38■□□□□ 0.37
SMARCD1-202ENST00000394963 ARSHQ5FYA8 562 aa17.38■□□□□ 0.37
SMARCD1-202ENST00000394963 NFRKBQ6P4R8 1299 aa17.38■□□□□ 0.37
SMARCD1-202ENST00000394963 TRIM65Q6PJ69 517 aa17.38■□□□□ 0.37
SMARCD1-202ENST00000394963 OTOP1Q7RTM1 612 aa17.38■□□□□ 0.37
SMARCD1-202ENST00000394963 ZBTB33Q86T24 672 aa17.38■□□□□ 0.37
SMARCD1-202ENST00000394963 UBE2TQ9NPD8 197 aaPredicted RBP17.38■□□□□ 0.37
SMARCD1-202ENST00000394963 FHOD1Q9Y613 1164 aa17.38■□□□□ 0.37
SMARCD1-202ENST00000394963 WDR46O15213 610 aaKnown RBP17.38■□□□□ 0.37
SMARCD1-202ENST00000394963 PSMC2P35998 433 aaKnown RBP17.38■□□□□ 0.37
SMARCD1-202ENST00000394963 STAT1P42224 750 aa17.38■□□□□ 0.37
SMARCD1-202ENST00000394963 BMS1Q14692 1282 aaKnown RBP17.38■□□□□ 0.37
SMARCD1-202ENST00000394963 SYTL5Q8TDW5 730 aaPredicted RBP17.38■□□□□ 0.37
SMARCD1-202ENST00000394963 NOX5Q96PH1 765 aa17.38■□□□□ 0.37
SMARCD1-202ENST00000394963 KCNK3O14649 394 aa17.37■□□□□ 0.37
SMARCD1-202ENST00000394963 ICAM1P05362 532 aa17.37■□□□□ 0.37
SMARCD1-202ENST00000394963 SPATA31C1P0DKV0 1188 aa17.37■□□□□ 0.37
SMARCD1-202ENST00000394963 KCNA3P22001 575 aa17.37■□□□□ 0.37
SMARCD1-202ENST00000394963 ELOA2Q8IYF1 753 aaPredicted RBP17.37■□□□□ 0.37
SMARCD1-202ENST00000394963 EHBP1Q8NDI1 1231 aa17.37■□□□□ 0.37
SMARCD1-202ENST00000394963 BACE1P56817 501 aa17.37■□□□□ 0.37
SMARCD1-202ENST00000394963 TGFB2P61812 414 aa17.37■□□□□ 0.37
SMARCD1-202ENST00000394963 DMP1Q13316 513 aaPredicted RBP17.37■□□□□ 0.37
SMARCD1-202ENST00000394963 KRT222Q8N1A0 295 aa17.37■□□□□ 0.37
SMARCD1-202ENST00000394963 SYT2Q8N9I0 419 aaPredicted RBP17.37■□□□□ 0.37
SMARCD1-202ENST00000394963 IFT74Q96LB3 600 aa17.37■□□□□ 0.37
SMARCD1-202ENST00000394963 TRPC6Q9Y210 931 aa17.37■□□□□ 0.37
SMARCD1-202ENST00000394963 TKFCQ3LXA3 575 aa17.37■□□□□ 0.37
SMARCD1-202ENST00000394963 GNPTABQ3T906 1256 aa17.37■□□□□ 0.37
SMARCD1-202ENST00000394963 POP1Q99575 1024 aaKnown RBP17.37■□□□□ 0.37
SMARCD1-202ENST00000394963 CTNND1O60716 968 aaKnown RBP17.36■□□□□ 0.37
SMARCD1-202ENST00000394963 P4HBP07237 508 aaKnown RBP17.36■□□□□ 0.37
SMARCD1-202ENST00000394963 SPON1Q9HCB6 807 aa17.36■□□□□ 0.37
SMARCD1-202ENST00000394963 KCNMB3Q9NPA1 279 aa17.36■□□□□ 0.37
SMARCD1-202ENST00000394963 PHLPP2Q6ZVD8 1323 aa17.36■□□□□ 0.37
SMARCD1-202ENST00000394963 CHD4Q14839 1912 aa17.36■□□□□ 0.37
SMARCD1-202ENST00000394963 CCDC88AQ3V6T2 1871 aa17.36■□□□□ 0.37
SMARCD1-202ENST00000394963 DENND3A2RUS2 1198 aa17.36■□□□□ 0.37
SMARCD1-202ENST00000394963 TMEM139Q8IV31 216 aa17.36■□□□□ 0.37
SMARCD1-202ENST00000394963 CSDE1O75534 798 aaKnown RBP17.36■□□□□ 0.37
SMARCD1-202ENST00000394963 GTF2F1P35269 517 aaKnown RBP eCLIP17.36■□□□□ 0.376e-17■■■■■ 36.5
SMARCD1-202ENST00000394963 ZNF394Q53GI3 561 aa17.36■□□□□ 0.37
SMARCD1-202ENST00000394963 APTXQ7Z2E3 356 aaKnown RBP17.36■□□□□ 0.37
SMARCD1-202ENST00000394963 ETNPPLQ8TBG4 499 aa17.36■□□□□ 0.37
SMARCD1-202ENST00000394963 MS4A14Q96JA4 679 aa17.36■□□□□ 0.37
SMARCD1-202ENST00000394963 BCCIPQ9P287 314 aaKnown RBP eCLIP17.36■□□□□ 0.37
SMARCD1-202ENST00000394963 LIG4P49917 911 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 HAUS6Q7Z4H7 955 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 DAAM2Q86T65 1068 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 FAM83AQ86UY5 434 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 CLMNQ96JQ2 1002 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 CBWD1Q9BRT8 395 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 PACSIN1Q9BY11 444 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 CTTNBP2NLQ9P2B4 639 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 KRT19P08727 400 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 MYL7Q01449 175 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 EPC2Q52LR7 807 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 GLYCTKQ8IVS8 523 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 NOA1Q8NC60 698 aaKnown RBP17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 AZI2Q9H6S1 392 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 ARHGAP20Q9P2F6 1191 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 RCCD1A6NED2 376 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 GNA14O95837 355 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 SRGAP1Q7Z6B7 1085 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 DEPTORQ8TB45 409 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 NSUN6Q8TEA1 469 aaKnown RBP17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 PPP1R9AQ9ULJ8 1098 aa17.35■□□□□ 0.37
SMARCD1-202ENST00000394963 EFCAB8A8MWE9 144 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 OPLAHO14841 1288 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 CCND2P30279 289 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 TMEM119Q4V9L6 283 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 SCYL3Q8IZE3 742 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 NLRP4Q96MN2 994 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 FAM213AQ9BRX8 229 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 SLX4Q8IY92 1834 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 SLC12A3P55017 1021 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 STRN3Q13033 797 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 EPHA7Q15375 998 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 OTUD6AQ7L8S5 288 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 DNAJC12Q9UKB3 198 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 ESYT3A0FGR9 886 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 WDR64B1ANS9 1081 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 EDIL3O43854 480 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 ACOT2P49753 483 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 SF3A3Q12874 501 aaKnown RBP eCLIP17.34■□□□□ 0.376e-7■■■■□ 20.6
SMARCD1-202ENST00000394963 Q3C1V9 767 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 C2CD6Q53TS8 623 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms