RNA–Protein interactions for RNA: ENST00000394939.3

GTF2IRD2B-201, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-201ENST00000394939 PPFIA1Q13136 1202 aa13.52□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 GRB10Q13322 594 aa13.52□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 TRMT1LQ7Z2T5 733 aaKnown RBP13.52□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 CEP57L1Q8IYX8 460 aa13.52□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 PDILTQ8N807 584 aa13.52□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 PNMA5Q96PV4 448 aa13.52□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 PLIN2Q99541 437 aa13.52□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 JPH2Q9BR39 696 aaPredicted RBP13.52□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 NIFKQ9BYG3 293 aaKnown RBP13.52□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 MAGEF1Q9HAY2 307 aa13.52□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 NRCAMQ92823 1304 aa13.52□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 CENPFP49454 3210 aa13.52□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 SMIM10L2AP0DMW4 78 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 SMIM10L2BP0DMW5 78 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 CD44P16070 742 aaKnown RBP13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 ATP4AP20648 1035 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 MCM4P33991 863 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 NDUFA8P51970 172 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 AMPD3Q01432 767 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 FAM160A1Q05DH4 1040 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 ITGA7Q13683 1181 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 ECM1Q16610 540 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 NBPF20Q3BBV1 942 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 XKR9Q5GH70 373 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 FAM47CQ5HY64 1035 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 ANO5Q75V66 913 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 NECAB2Q7Z6G3 386 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 PIGOQ8TEQ8 1089 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 LARP4BQ92615 738 aaKnown RBP13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 RAD54LQ92698 747 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 DHX58Q96C10 678 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 CEP170P1Q96L14 293 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 PANK2Q9BZ23 570 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 LRRC27Q9C0I9 530 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 SENP6Q9GZR1 1112 aaPredicted RBP13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 RNPEPQ9H4A4 650 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 CYP26B1Q9NR63 512 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 WRAP73Q9P2S5 460 aaPredicted RBP13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 HPSEQ9Y251 543 aa13.51□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 MROH7Q68CQ1 1323 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 C17orf102A2RUQ5 167 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 MAGEB2O15479 319 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 KINO60870 393 aaKnown RBP13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 GADD45BO75293 160 aaPredicted RBP13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 SSBP05455 408 aaKnown RBP eCLIP13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 PLA2G4BP0C869 781 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 INSRRP14616 1297 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 RFC5P40937 340 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 PSMC6P62333 389 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 TBC1D8BQ0IIM8 1120 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 GRIK4Q16099 956 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 MTERF2Q49AM1 385 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 SV2BQ7L1I2 683 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 SESTD1Q86VW0 696 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 RETREG2Q8NC44 543 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 SLC7A3Q8WY07 619 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 BHMT2Q9H2M3 363 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 C11orf49Q9H6J7 331 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 BMP2KQ9NSY1 1161 aaPredicted RBP13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 LMBRD1Q9NUN5 540 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 KCND2Q9NZV8 630 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 HDAC6Q9UBN7 1215 aa13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 HOOK1Q9UJC3 728 aaKnown RBP13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 E9PMD0 336 aa13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 ARVCFO00192 962 aa13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 GAS2O43903 313 aaKnown RBP13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 DGAT1O75907 488 aa13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 ZNF202O95125 648 aa13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 STBD1O95210 358 aa13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 MBD3O95983 291 aa13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 RPLP2P05387 115 aaKnown RBP13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 SLFN14P0C7P3 912 aa13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 RARRES1P49788 294 aa13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 POLGP54098 1239 aaPredicted RBP13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 IGBP1P78318 339 aa13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 PLA2G4FQ68DD2 849 aa13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 KANK3Q6NY19 840 aa13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 GOLPH3LQ9H4A5 285 aa13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 BLOC1S4Q9NUP1 217 aa13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 NOD1Q9Y239 953 aa13.49□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 A0A087X0B3 334 aa13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 TLR3O15455 904 aaKnown RBP13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 KRT18P05783 430 aaKnown RBP13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 COL6A1P12109 1028 aa13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 EN2P19622 333 aaPredicted RBP13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 TMOD1P28289 359 aa13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 DNM2P50570 870 aa13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 NPEPPSP55786 919 aa13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 MCM6Q14566 821 aa13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 TARBP2Q15633 366 aaKnown RBP13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 E2F4Q16254 413 aa13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 PADI6Q6TGC4 694 aa13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 KCNK18Q7Z418 384 aa13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 FMR1NBQ8N0W7 255 aaPredicted RBP13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 SYT2Q8N9I0 419 aaPredicted RBP13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 CNNM3Q8NE01 707 aa13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 MCPH1Q8NEM0 835 aa13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 LMBR1Q8WVP7 490 aa13.48□□□□□ -0.25
GTF2IRD2B-201ENST00000394939 PAWRQ96IZ0 340 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms