RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 PCDHGC5Q9Y5F6 944 aa22.52■■□□□ 1.2
UPK3B-203ENST00000394849 PCDHA8Q9Y5H6 950 aa22.52■■□□□ 1.2
UPK3B-203ENST00000394849 PTPRZ1P23471 2315 aaPredicted RBP22.52■■□□□ 1.2
UPK3B-203ENST00000394849 PROB1E7EW31 1015 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 CENPBP07199 599 aaPredicted RBP22.51■■□□□ 1.19
UPK3B-203ENST00000394849 CALM1P0DP23 149 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 CALM2P0DP24 149 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 CALM3P0DP25 149 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 VCPP55072 806 aaKnown RBP22.51■■□□□ 1.19
UPK3B-203ENST00000394849 ACTR2P61160 394 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 PLCB3Q01970 1234 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 KCNC3Q14003 757 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 ANKRD54Q6NXT1 300 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 CASC1Q6TDU7 716 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 UBALD2Q8IYN6 164 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 COLGALT1Q8NBJ5 622 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 VN1R2Q8NFZ6 395 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 RIPOR3Q96MK2 946 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 ADAM2Q99965 735 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 MXRA8Q9BRK3 442 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 S1PR5Q9H228 398 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 ELAC1Q9H777 363 aaKnown RBP22.51■■□□□ 1.19
UPK3B-203ENST00000394849 LY9Q9HBG7 655 aa22.51■■□□□ 1.19
UPK3B-203ENST00000394849 ANTXR2P58335 489 aa22.5■■□□□ 1.19
UPK3B-203ENST00000394849 ERVFC1P60507 584 aa22.5■■□□□ 1.19
UPK3B-203ENST00000394849 TMEM266Q2M3C6 531 aa22.5■■□□□ 1.19
UPK3B-203ENST00000394849 MB21D2Q8IYB1 491 aaPredicted RBP22.5■■□□□ 1.19
UPK3B-203ENST00000394849 TRAPPC12Q8WVT3 735 aa22.5■■□□□ 1.19
UPK3B-203ENST00000394849 ATP6V0A4Q9HBG4 840 aa22.5■■□□□ 1.19
UPK3B-203ENST00000394849 TYW1Q9NV66 732 aaKnown RBP22.5■■□□□ 1.19
UPK3B-203ENST00000394849 TMEM161AQ9NX61 479 aa22.5■■□□□ 1.19
UPK3B-203ENST00000394849 COL1A2P08123 1366 aa22.5■■□□□ 1.19
UPK3B-203ENST00000394849 C9IYK1 514 aa22.49■■□□□ 1.19
UPK3B-203ENST00000394849 HOXA2O43364 376 aa22.49■■□□□ 1.19
UPK3B-203ENST00000394849 HBP1O60381 514 aa22.49■■□□□ 1.19
UPK3B-203ENST00000394849 NEFLP07196 543 aa22.49■■□□□ 1.19
UPK3B-203ENST00000394849 KLRC1P26715 233 aa22.49■■□□□ 1.19
UPK3B-203ENST00000394849 PPM1AP35813 382 aa22.49■■□□□ 1.19
UPK3B-203ENST00000394849 TECP42680 631 aa22.49■■□□□ 1.19
UPK3B-203ENST00000394849 PTH1RQ03431 593 aa22.49■■□□□ 1.19
UPK3B-203ENST00000394849 SRBD1Q8N5C6 995 aaKnown RBP22.49■■□□□ 1.19
UPK3B-203ENST00000394849 MRPS27Q92552 414 aaKnown RBP22.49■■□□□ 1.19
UPK3B-203ENST00000394849 NECTIN4Q96NY8 510 aa22.49■■□□□ 1.19
UPK3B-203ENST00000394849 FAM86C1Q9NVL1 165 aa22.49■■□□□ 1.19
UPK3B-203ENST00000394849 SPTBN4Q9H254 2564 aa22.48■■□□□ 1.19
UPK3B-203ENST00000394849 GALR2O43603 387 aaPredicted RBP22.48■■□□□ 1.19
UPK3B-203ENST00000394849 ATG7O95352 703 aa22.48■■□□□ 1.19
UPK3B-203ENST00000394849 UBE2SQ16763 222 aa22.48■■□□□ 1.19
UPK3B-203ENST00000394849 TPRNQ4KMQ1 711 aa22.48■■□□□ 1.19
UPK3B-203ENST00000394849 FAM102BQ5T8I3 360 aa22.48■■□□□ 1.19
UPK3B-203ENST00000394849 FAM160B1Q5W0V3 765 aa22.48■■□□□ 1.19
UPK3B-203ENST00000394849 NFXL1Q6ZNB6 911 aa22.48■■□□□ 1.19
UPK3B-203ENST00000394849 TMEM87BQ96K49 555 aa22.48■■□□□ 1.19
UPK3B-203ENST00000394849 MYL10Q9BUA6 226 aa22.48■■□□□ 1.19
UPK3B-203ENST00000394849 ST3GAL5Q9UNP4 418 aa22.48■■□□□ 1.19
UPK3B-203ENST00000394849 GINS2Q9Y248 185 aa22.48■■□□□ 1.19
UPK3B-203ENST00000394849 NOC2LQ9Y3T9 749 aaKnown RBP22.48■■□□□ 1.19
UPK3B-203ENST00000394849 CCDC69A6NI79 296 aa22.47■■□□□ 1.19
UPK3B-203ENST00000394849 MGEA5O60502 916 aa22.47■■□□□ 1.19
UPK3B-203ENST00000394849 PLEKHA8P1O95397 391 aa22.47■■□□□ 1.19
UPK3B-203ENST00000394849 FOSP01100 380 aaPredicted RBP22.47■■□□□ 1.19
UPK3B-203ENST00000394849 IBSPP21815 317 aaPredicted RBP22.47■■□□□ 1.19
UPK3B-203ENST00000394849 FAM189BP81408 668 aa22.47■■□□□ 1.19
UPK3B-203ENST00000394849 RBM10P98175 930 aaKnown RBP22.47■■□□□ 1.19
UPK3B-203ENST00000394849 KRT17Q04695 432 aa22.47■■□□□ 1.19
UPK3B-203ENST00000394849 MTMR3Q13615 1198 aa22.47■■□□□ 1.19
UPK3B-203ENST00000394849 CEP55Q53EZ4 464 aa22.47■■□□□ 1.19
UPK3B-203ENST00000394849 ZNF484Q5JVG2 852 aa22.47■■□□□ 1.19
UPK3B-203ENST00000394849 CES5AQ6NT32 575 aa22.47■■□□□ 1.19
UPK3B-203ENST00000394849 SYCE2Q6PIF2 218 aa22.47■■□□□ 1.19
UPK3B-203ENST00000394849 KIAA0319LQ8IZA0 1049 aa22.47■■□□□ 1.19
UPK3B-203ENST00000394849 TCF25Q9BQ70 676 aa22.47■■□□□ 1.19
UPK3B-203ENST00000394849 ENTPD7Q9NQZ7 604 aa22.47■■□□□ 1.19
UPK3B-203ENST00000394849 SORCS3Q9UPU3 1222 aa22.47■■□□□ 1.19
UPK3B-203ENST00000394849 RIF1Q5UIP0 2472 aaKnown RBP22.46■■□□□ 1.19
UPK3B-203ENST00000394849 IGKV6D-21A0A0A0MT36 114 aa22.46■■□□□ 1.19
UPK3B-203ENST00000394849 MCM5P33992 734 aa22.46■■□□□ 1.19
UPK3B-203ENST00000394849 CRYBB1P53674 252 aaPredicted RBP22.46■■□□□ 1.19
UPK3B-203ENST00000394849 ITIH3Q06033 890 aa22.46■■□□□ 1.19
UPK3B-203ENST00000394849 TTC22Q5TAA0 569 aa22.46■■□□□ 1.19
UPK3B-203ENST00000394849 PLPP4Q5VZY2 271 aa22.46■■□□□ 1.19
UPK3B-203ENST00000394849 CASP10Q92851 521 aa22.46■■□□□ 1.19
UPK3B-203ENST00000394849 TMEM117Q9H0C3 514 aa22.46■■□□□ 1.19
UPK3B-203ENST00000394849 CWH43Q9H720 699 aa22.46■■□□□ 1.19
UPK3B-203ENST00000394849 EVPLQ92817 2033 aa22.45■■□□□ 1.18
UPK3B-203ENST00000394849 H0Y858 1186 aa22.45■■□□□ 1.18
UPK3B-203ENST00000394849 CHMLP26374 656 aa22.45■■□□□ 1.18
UPK3B-203ENST00000394849 PDE4AP27815 886 aa22.45■■□□□ 1.18
UPK3B-203ENST00000394849 LIFRP42702 1097 aa22.45■■□□□ 1.18
UPK3B-203ENST00000394849 ZNF710Q8N1W2 664 aa22.45■■□□□ 1.18
UPK3B-203ENST00000394849 KREMEN2Q8NCW0 462 aa22.45■■□□□ 1.18
UPK3B-203ENST00000394849 MAP4K1Q92918 833 aa22.45■■□□□ 1.18
UPK3B-203ENST00000394849 AGO4Q9HCK5 861 aaKnown RBP22.45■■□□□ 1.18
UPK3B-203ENST00000394849 TAF6LQ9Y6J9 622 aa22.45■■□□□ 1.18
UPK3B-203ENST00000394849 MYO10Q9HD67 2058 aa22.45■■□□□ 1.18
UPK3B-203ENST00000394849 BACH1O14867 736 aa22.44■■□□□ 1.18
UPK3B-203ENST00000394849 PRC1O43663 620 aa22.44■■□□□ 1.18
UPK3B-203ENST00000394849 BMS1Q14692 1282 aaKnown RBP22.44■■□□□ 1.18
UPK3B-203ENST00000394849 HEATR3Q7Z4Q2 680 aa22.44■■□□□ 1.18
UPK3B-203ENST00000394849 TMEM40Q8WWA1 233 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms