RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 NR1D1P20393 614 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 PON1P27169 355 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 ALDH1B1P30837 517 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 SSR1P43307 286 aaKnown RBP11.49□□□□□ -0.57
ACTN1-203ENST00000394419 AARSP49588 968 aaKnown RBP eCLIP11.49□□□□□ -0.57
ACTN1-203ENST00000394419 GABPAQ06546 454 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 ALS2CLQ60I27 953 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 EDEM3Q9BZQ6 932 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 NAGPAQ9UK23 515 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 DNAJC12Q9UKB3 198 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.49□□□□□ -0.57
ACTN1-203ENST00000394419 DDX60Q8IY21 1712 aaKnown RBP11.49□□□□□ -0.57
ACTN1-203ENST00000394419 EML1O00423 815 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 SORBS3O60504 671 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 ECE1P42892 770 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 IRX3P78415 501 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-203ENST00000394419 CCDC26Q8TAB7 109 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 PPM1EQ8WY54 764 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 CCDC127Q96BQ5 260 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 METTL14Q9HCE5 456 aaKnown RBP11.48□□□□□ -0.57
ACTN1-203ENST00000394419 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-203ENST00000394419 UTP11Q9Y3A2 253 aaKnown RBP11.48□□□□□ -0.57
ACTN1-203ENST00000394419 EDIL3O43854 480 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 ITGA4P13612 1032 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 PSMC2P35998 433 aaKnown RBP11.48□□□□□ -0.57
ACTN1-203ENST00000394419 MNAT1P51948 309 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 CETN1Q12798 172 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 DRAP1Q14919 205 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-203ENST00000394419 STXBP4Q6ZWJ1 553 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 SELENOSQ9BQE4 189 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 PARVGQ9HBI0 331 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 OSGEPQ9NPF4 335 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 NOC2LQ9Y3T9 749 aaKnown RBP11.48□□□□□ -0.57
ACTN1-203ENST00000394419 XIRP1Q702N8 1843 aaKnown RBP11.48□□□□□ -0.57
ACTN1-203ENST00000394419 K7ENM7 598 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 MEIS2O14770 477 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 RPA1P27694 616 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 AOC3Q16853 763 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 PHLDB2Q86SQ0 1253 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 CRAMP1Q96RY5 1269 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 ZNF577Q9BSK1 485 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 TYW1Q9NV66 732 aaKnown RBP11.48□□□□□ -0.57
ACTN1-203ENST00000394419 TMOD4Q9NZQ9 345 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 RNF14Q9UBS8 474 aa11.48□□□□□ -0.57
ACTN1-203ENST00000394419 GOLGA6L10A0A0M3HER8 536 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 GOLGA8IPA6NC78 632 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 GOLGA8JA6NMD2 632 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 TTI1O43156 1089 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 EVI5O60447 810 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 FOSP01100 380 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-203ENST00000394419 PRLRP16471 622 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 GALCP54803 685 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 SLC12A3P55017 1021 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 DHX9Q08211 1270 aaKnown RBP11.47□□□□□ -0.57
ACTN1-203ENST00000394419 TTMPQ5BVD1 217 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 PPP4R3CPQ6ZMV5 832 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 ZNF662Q6ZS27 426 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 TMEM179Q6ZVK1 233 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 METTL13Q8N6R0 699 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 USP38Q8NB14 1042 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 RNPC3Q96LT9 517 aaKnown RBP11.47□□□□□ -0.57
ACTN1-203ENST00000394419 BZW2Q9Y6E2 419 aaKnown RBP11.47□□□□□ -0.57
ACTN1-203ENST00000394419 CAPN7Q9Y6W3 813 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 PLCH1Q4KWH8 1693 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 GOLGA6L7A0A1B0GV03 622 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 CCDC169A6NNP5 214 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 RAD17O75943 681 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 POLR2MP0CAP2 368 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 STAT2P52630 851 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 IFT88Q13099 833 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 AP3B2Q13367 1082 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 MESDQ14696 234 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 MEI1Q5TIA1 1274 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 SYT2Q8N9I0 419 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-203ENST00000394419 DCAF4Q8WV16 495 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 LRRC45Q96CN5 670 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 KCTD10Q9H3F6 313 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 UBE2TQ9NPD8 197 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-203ENST00000394419 MYCLP12524 364 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-203ENST00000394419 ADRA2BP18089 450 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 CDR1P51861 262 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 PLTPP55058 493 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 SETQ01105 290 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-203ENST00000394419 ZCWPW2Q504Y3 356 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 GLE1Q53GS7 698 aaKnown RBP11.47□□□□□ -0.57
ACTN1-203ENST00000394419 FRMD5Q7Z6J6 570 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 PPM1KQ8N3J5 372 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 ACER1Q8TDN7 264 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 ELMO3Q96BJ8 720 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 TRIM51Q9BSJ1 452 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 ARHGEF10LQ9HCE6 1279 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 NOVA2Q9UNW9 492 aaKnown RBP11.47□□□□□ -0.57
ACTN1-203ENST00000394419 PTPN22Q9Y2R2 807 aa11.47□□□□□ -0.57
ACTN1-203ENST00000394419 ABCB11O95342 1321 aa11.46□□□□□ -0.57
ACTN1-203ENST00000394419 PJA2O43164 708 aa11.46□□□□□ -0.57
ACTN1-203ENST00000394419 PPIP5K2O43314 1243 aa11.46□□□□□ -0.57
ACTN1-203ENST00000394419 ECE2O60344 883 aa11.46□□□□□ -0.57
ACTN1-203ENST00000394419 SNHG28P0DPA3 235 aa11.46□□□□□ -0.57
ACTN1-203ENST00000394419 NPR1P16066 1061 aa11.46□□□□□ -0.57
ACTN1-203ENST00000394419 CHRNA5P30532 468 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms