RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 C6orf89Q6UWU4 347 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 UNC13DQ70J99 1090 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 CACNA2D4Q7Z3S7 1137 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 CPLX4Q7Z7G2 160 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 NLGN1Q8N2Q7 840 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 CUEDC2Q9H467 287 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 IGKV6D-41A0A0C4DH26 115 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 F5H6K3 240 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 EIF4A3P38919 411 aaKnown RBP10.87□□□□□ -0.67
PSEN1-204ENST00000394164 ECE1P42892 770 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 KLRC3Q07444 240 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 ITGB3BPQ13352 177 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-204ENST00000394164 VWA3BQ502W6 1294 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 CCDC174Q6PII3 467 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 IQCKQ8N0W5 287 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 TBC1D5Q92609 795 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 IFIH1Q9BYX4 1025 aaKnown RBP10.87□□□□□ -0.67
PSEN1-204ENST00000394164 PKD2L1Q9P0L9 805 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 SMCHD1A6NHR9 2005 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 DCDC2CA8MYV0 355 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 KIF3CO14782 793 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 HGSO14964 777 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-204ENST00000394164 MED24O75448 989 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 SNHG28P0DPA3 235 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 ALDH1B1P30837 517 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 FXR2P51116 673 aaKnown RBP eCLIP10.87□□□□□ -0.67
PSEN1-204ENST00000394164 GFPT1Q06210 699 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-204ENST00000394164 GRIK3Q13003 919 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 PLCB4Q15147 1175 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 FAM133BQ5BKY9 247 aaKnown RBP10.87□□□□□ -0.67
PSEN1-204ENST00000394164 DDX42Q86XP3 938 aaKnown RBP eCLIP10.87□□□□□ -0.67
PSEN1-204ENST00000394164 FAM114A1Q8IWE2 563 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 CDAN1Q8IWY9 1227 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 CACNA2D3Q8IZS8 1091 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 MDM1Q8TC05 714 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 CASKIN2Q8WXE0 1202 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 NUP58Q9BVL2 599 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 ANO3Q9BYT9 981 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 ACTR5Q9H9F9 607 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-204ENST00000394164 A0A1W2PQC6 194 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 ZBTB39O15060 712 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 MYL1P05976 194 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 PLA2G4BP0C869 781 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 ZNF76P36508 570 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 ELF3P78545 371 aaPredicted RBP10.86□□□□□ -0.67
PSEN1-204ENST00000394164 ZBED6P86452 979 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 RRP1BQ14684 758 aaKnown RBP10.86□□□□□ -0.67
PSEN1-204ENST00000394164 FAM26FQ5R3K3 315 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 CENPPQ6IPU0 288 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 MIGA2Q7L4E1 593 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 SIAH1Q8IUQ4 282 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 IFT20Q8IY31 132 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 MYOCDQ8IZQ8 938 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 PRMT6Q96LA8 375 aaPredicted RBP10.86□□□□□ -0.67
PSEN1-204ENST00000394164 PLCD4Q9BRC7 762 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.86□□□□□ -0.67
PSEN1-204ENST00000394164 IRAK4Q9NWZ3 460 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 ARHGAP20Q9P2F6 1191 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 CPSF2Q9P2I0 782 aaKnown RBP10.86□□□□□ -0.67
PSEN1-204ENST00000394164 SWAP70Q9UH65 585 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 ESYT2A0FGR8 921 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 RAD17O75943 681 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 ANP32DO95626 131 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 CFBP00751 764 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 SLC8A1P32418 973 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 CASP5P51878 434 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 ABCB5Q2M3G0 1257 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 GPATCH4Q5T3I0 446 aaKnown RBP10.86□□□□□ -0.67
PSEN1-204ENST00000394164 CAVIN3Q969G5 261 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 MASTLQ96GX5 879 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 CSRNP1Q96S65 589 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 PDGFDQ9GZP0 370 aaPredicted RBP10.86□□□□□ -0.67
PSEN1-204ENST00000394164 RGL1Q9NZL6 768 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 CNOT8Q9UFF9 292 aaKnown RBP10.86□□□□□ -0.67
PSEN1-204ENST00000394164 SALL4Q9UJQ4 1053 aa10.86□□□□□ -0.67
PSEN1-204ENST00000394164 ZBTB12Q9Y330 459 aaPredicted RBP10.86□□□□□ -0.67
PSEN1-204ENST00000394164 ANO9A1A5B4 782 aa10.85□□□□□ -0.67
PSEN1-204ENST00000394164 RSPH10B2B2RC85 870 aa10.85□□□□□ -0.67
PSEN1-204ENST00000394164 ONECUT3O60422 494 aaPredicted RBP10.85□□□□□ -0.67
PSEN1-204ENST00000394164 DIAPH2O60879 1101 aa10.85□□□□□ -0.67
PSEN1-204ENST00000394164 FTCDO95954 541 aa10.85□□□□□ -0.67
PSEN1-204ENST00000394164 NDUFB10O96000 172 aa10.85□□□□□ -0.67
PSEN1-204ENST00000394164 RSPH10BP0C881 870 aa10.85□□□□□ -0.67
PSEN1-204ENST00000394164 RASSF7Q02833 373 aa10.85□□□□□ -0.67
PSEN1-204ENST00000394164 CAPRIN2Q6IMN6 1127 aaKnown RBP10.85□□□□□ -0.67
PSEN1-204ENST00000394164 BZW1Q7L1Q6 419 aaKnown RBP10.85□□□□□ -0.67
PSEN1-204ENST00000394164 PIGOQ8TEQ8 1089 aa10.85□□□□□ -0.67
PSEN1-204ENST00000394164 TTYH3Q9C0H2 523 aa10.85□□□□□ -0.67
PSEN1-204ENST00000394164 BMP2KQ9NSY1 1161 aaPredicted RBP10.85□□□□□ -0.67
PSEN1-204ENST00000394164 NOVA2Q9UNW9 492 aaKnown RBP10.85□□□□□ -0.67
PSEN1-204ENST00000394164 BCS1LQ9Y276 419 aa10.85□□□□□ -0.67
PSEN1-204ENST00000394164 HYOU1Q9Y4L1 999 aa10.85□□□□□ -0.67
PSEN1-204ENST00000394164 A6NNZ2 444 aa10.85□□□□□ -0.67
PSEN1-204ENST00000394164 FAM86B1E9PN63 330 aa10.85□□□□□ -0.67
PSEN1-204ENST00000394164 GCOM1H8Y6P7 765 aaPredicted RBP10.85□□□□□ -0.67
PSEN1-204ENST00000394164 FAM86B2P0C5J1 330 aa10.85□□□□□ -0.67
PSEN1-204ENST00000394164 MYZAPP0CAP1 466 aa10.85□□□□□ -0.67
PSEN1-204ENST00000394164 POLR2FP61218 127 aaKnown RBP10.85□□□□□ -0.67
PSEN1-204ENST00000394164 BYSLQ13895 437 aaKnown RBP10.85□□□□□ -0.67
PSEN1-204ENST00000394164 TUBB8Q3ZCM7 444 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms