RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 UPF3BQ9BZI7 483 aaKnown RBP19.88■□□□□ 0.77
SNRPA1-202ENST00000394082 ERVK-5Q9HDB9 667 aa19.88■□□□□ 0.77
SNRPA1-202ENST00000394082 ZNF302Q9NR11 478 aa19.88■□□□□ 0.77
SNRPA1-202ENST00000394082 C1orf112Q9NSG2 853 aa19.88■□□□□ 0.77
SNRPA1-202ENST00000394082 MAFBQ9Y5Q3 323 aaPredicted RBP19.88■□□□□ 0.77
SNRPA1-202ENST00000394082 LOXHD1Q8IVV2 1947 aa19.87■□□□□ 0.77
SNRPA1-202ENST00000394082 BACH1O14867 736 aa19.87■□□□□ 0.77
SNRPA1-202ENST00000394082 GNA11P29992 359 aa19.87■□□□□ 0.77
SNRPA1-202ENST00000394082 ADD1P35611 737 aaKnown RBP19.87■□□□□ 0.77
SNRPA1-202ENST00000394082 METAP2P50579 478 aaKnown RBP eCLIP19.87■□□□□ 0.77
SNRPA1-202ENST00000394082 ADAM15Q13444 863 aa19.87■□□□□ 0.77
SNRPA1-202ENST00000394082 PDXDC2PQ6P474 469 aa19.87■□□□□ 0.77
SNRPA1-202ENST00000394082 SPPL3Q8TCT6 385 aa19.87■□□□□ 0.77
SNRPA1-202ENST00000394082 BBXQ8WY36 941 aaPredicted RBP19.87■□□□□ 0.77
SNRPA1-202ENST00000394082 C6orf50Q9HD87 102 aa19.87■□□□□ 0.77
SNRPA1-202ENST00000394082 ALG13Q9NP73 1137 aaKnown RBP19.87■□□□□ 0.77
SNRPA1-202ENST00000394082 RGS18Q9NS28 235 aa19.87■□□□□ 0.77
SNRPA1-202ENST00000394082 ZBTB42B2RXF5 422 aa19.86■□□□□ 0.77
SNRPA1-202ENST00000394082 GPR182O15218 404 aa19.86■□□□□ 0.77
SNRPA1-202ENST00000394082 PRPF3O43395 683 aaKnown RBP19.86■□□□□ 0.77
SNRPA1-202ENST00000394082 DCXO43602 365 aa19.86■□□□□ 0.77
SNRPA1-202ENST00000394082 RPS6KA5O75582 802 aa19.86■□□□□ 0.77
SNRPA1-202ENST00000394082 ITGB1P05556 798 aa19.86■□□□□ 0.77
SNRPA1-202ENST00000394082 HOXD11P31277 338 aaPredicted RBP19.86■□□□□ 0.77
SNRPA1-202ENST00000394082 CIITAP33076 1130 aa19.86■□□□□ 0.77
SNRPA1-202ENST00000394082 UBE3AQ05086 875 aa19.86■□□□□ 0.77
SNRPA1-202ENST00000394082 SMAD4Q13485 552 aaKnown RBP19.86■□□□□ 0.77
SNRPA1-202ENST00000394082 EP400NLQ6ZTU2 488 aa19.86■□□□□ 0.77
SNRPA1-202ENST00000394082 SLC24A5Q71RS6 500 aa19.86■□□□□ 0.77
SNRPA1-202ENST00000394082 REXO1Q8N1G1 1221 aaKnown RBP19.86■□□□□ 0.77
SNRPA1-202ENST00000394082 AGXT2Q9BYV1 514 aa19.86■□□□□ 0.77
SNRPA1-202ENST00000394082 LRFN2Q9ULH4 789 aa19.86■□□□□ 0.77
SNRPA1-202ENST00000394082 FAM86C2PA6NEL3 165 aa19.85■□□□□ 0.77
SNRPA1-202ENST00000394082 MBTPS2O43462 519 aa19.85■□□□□ 0.77
SNRPA1-202ENST00000394082 EYA4O95677 639 aa19.85■□□□□ 0.77
SNRPA1-202ENST00000394082 ATP4AP20648 1035 aa19.85■□□□□ 0.77
SNRPA1-202ENST00000394082 CRYBB1P53674 252 aaPredicted RBP19.85■□□□□ 0.77
SNRPA1-202ENST00000394082 FGD1P98174 961 aa19.85■□□□□ 0.77
SNRPA1-202ENST00000394082 DLX2Q07687 328 aaPredicted RBP19.85■□□□□ 0.77
SNRPA1-202ENST00000394082 NFX1Q12986 1120 aaKnown RBP19.85■□□□□ 0.77
SNRPA1-202ENST00000394082 JAKMIP3Q5VZ66 844 aa19.85■□□□□ 0.77
SNRPA1-202ENST00000394082 SWSAP1Q6NVH7 229 aa19.85■□□□□ 0.77
SNRPA1-202ENST00000394082 EFHBQ8N7U6 833 aa19.85■□□□□ 0.77
SNRPA1-202ENST00000394082 KLHL23Q8NBE8 558 aa19.85■□□□□ 0.77
SNRPA1-202ENST00000394082 ZNF577Q9BSK1 485 aa19.85■□□□□ 0.77
SNRPA1-202ENST00000394082 CEP131Q9UPN4 1083 aa19.85■□□□□ 0.77
SNRPA1-202ENST00000394082 PCDHB7Q9Y5E2 793 aa19.85■□□□□ 0.77
SNRPA1-202ENST00000394082 KIAA1671Q9BY89 1806 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 TRIOO75962 3097 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 FSD2A1L4K1 749 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 C9IYK1 514 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 DDX39AO00148 427 aaKnown RBP19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 MAGEB2O15479 319 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 TBX10O75333 385 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 C22orf31O95567 290 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 DNAJB1P25685 340 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 FAM189BP81408 668 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 PKN1Q16512 942 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 CSPP1Q1MSJ5 1256 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 BICD2Q8TD16 824 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 TMEM40Q8WWA1 233 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 MSLNLQ96KJ4 702 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 ELAC1Q9H777 363 aaKnown RBP19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 AAASQ9NRG9 546 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 CD207Q9UJ71 328 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 ST3GAL5Q9UNP4 418 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 NOC2LQ9Y3T9 749 aaKnown RBP19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 PCDHA10Q9Y5I2 948 aa19.84■□□□□ 0.77
SNRPA1-202ENST00000394082 PSAPP07602 524 aa19.83■□□□□ 0.77
SNRPA1-202ENST00000394082 HSPA4P34932 840 aa19.83■□□□□ 0.77
SNRPA1-202ENST00000394082 TMEM266Q2M3C6 531 aa19.83■□□□□ 0.77
SNRPA1-202ENST00000394082 POF1BQ8WVV4 589 aa19.83■□□□□ 0.77
SNRPA1-202ENST00000394082 ADAM2Q99965 735 aa19.83■□□□□ 0.77
SNRPA1-202ENST00000394082 RNF26Q9BY78 433 aaPredicted RBP19.83■□□□□ 0.77
SNRPA1-202ENST00000394082 KCNH6Q9H252 994 aa19.83■□□□□ 0.77
SNRPA1-202ENST00000394082 CDHR5Q9HBB8 845 aa19.83■□□□□ 0.77
SNRPA1-202ENST00000394082 TCEAL9Q9UHQ7 104 aa19.83■□□□□ 0.77
SNRPA1-202ENST00000394082 PCDHB12Q9Y5F1 795 aa19.83■□□□□ 0.77
SNRPA1-202ENST00000394082 DENND3A2RUS2 1198 aa19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 MGEA5O60502 916 aa19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 GPR32O75388 356 aa19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 EVCP57679 992 aa19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 APOBRQ0VD83 1088 aa19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 COASYQ13057 564 aa19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 PAN2Q504Q3 1202 aaKnown RBP19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 PDE12Q6L8Q7 609 aaKnown RBP19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 BLOC1S2Q6QNY1 142 aa19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 Q6ZUG5 572 aa19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 CKAP2LQ8IYA6 745 aa19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 CCDC148Q8NFR7 591 aa19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 BRF1Q92994 677 aa19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 FAM167AQ96KS9 214 aa19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 TMEM161AQ9NX61 479 aa19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 GINS2Q9Y248 185 aa19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 MYH9P35579 1960 aaKnown RBP19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 FNDC1Q4ZHG4 1894 aaPredicted RBP19.82■□□□□ 0.76
SNRPA1-202ENST00000394082 GTF2F1P35269 517 aaKnown RBP eCLIP19.81■□□□□ 0.76
SNRPA1-202ENST00000394082 IRS1P35568 1242 aa19.81■□□□□ 0.76
SNRPA1-202ENST00000394082 USP11P51784 963 aa19.81■□□□□ 0.76
SNRPA1-202ENST00000394082 NTRK3Q16288 839 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms