RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 CCDC93Q567U6 631 aa6.38□□□□□ -1.39
NPM1-203ENST00000393820 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.38□□□□□ -1.39
NPM1-203ENST00000393820 DDX42Q86XP3 938 aaKnown RBP eCLIP6.38□□□□□ -1.391e-6■■■□□ 17.3
NPM1-203ENST00000393820 KIF18AQ8NI77 898 aa6.38□□□□□ -1.39
NPM1-203ENST00000393820 BICD2Q8TD16 824 aa6.38□□□□□ -1.39
NPM1-203ENST00000393820 WFDC12Q8WWY7 111 aa6.38□□□□□ -1.39
NPM1-203ENST00000393820 GTF3C6Q969F1 213 aa6.38□□□□□ -1.39
NPM1-203ENST00000393820 ELMO3Q96BJ8 720 aa6.38□□□□□ -1.39
NPM1-203ENST00000393820 C16orf45Q96MC5 204 aaPredicted RBP6.38□□□□□ -1.39
NPM1-203ENST00000393820 ZNF396Q96N95 335 aaPredicted RBP6.38□□□□□ -1.39
NPM1-203ENST00000393820 NEK1Q96PY6 1258 aa6.38□□□□□ -1.39
NPM1-203ENST00000393820 NYXQ9GZU5 481 aa6.38□□□□□ -1.39
NPM1-203ENST00000393820 NAT10Q9H0A0 1025 aaKnown RBP6.38□□□□□ -1.39
NPM1-203ENST00000393820 MRPL18Q9H0U6 180 aaKnown RBP6.38□□□□□ -1.39
NPM1-203ENST00000393820 ANO10Q9NW15 660 aa6.38□□□□□ -1.39
NPM1-203ENST00000393820 NRBP1Q9UHY1 535 aa6.38□□□□□ -1.39
NPM1-203ENST00000393820 ZHX1Q9UKY1 873 aaPredicted RBP6.38□□□□□ -1.39
NPM1-203ENST00000393820 SIPA1L3O60292 1781 aaPredicted RBP6.37□□□□□ -1.39
NPM1-203ENST00000393820 MED23Q9ULK4 1368 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 BECN2A8MW95 431 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 ERVV-1B6SEH8 477 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 H3BQV1 296 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 GRM8O00222 908 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 TAF5LO75529 589 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 SASH1O94885 1247 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 A1BGP04217 495 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 SKILP12757 684 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 ATP5JP18859 108 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 PMLP29590 882 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 POLR2BP30876 1174 aaKnown RBP6.37□□□□□ -1.39
NPM1-203ENST00000393820 L1CAMP32004 1257 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 GRK4P32298 578 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 SOX5P35711 763 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 TBX4P57082 545 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 LRMPQ12912 555 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 KIF4BQ2VIQ3 1234 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 GNPTABQ3T906 1256 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 KRT222Q8N1A0 295 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 SMARCC2Q8TAQ2 1214 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 EAF2Q96CJ1 260 aaPredicted RBP6.37□□□□□ -1.39
NPM1-203ENST00000393820 ACSF2Q96CM8 615 aaPredicted RBP6.37□□□□□ -1.39
NPM1-203ENST00000393820 FAM227BQ96M60 508 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 PSMD1Q99460 953 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 BPIFA3Q9BQP9 254 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 RUSC1Q9BVN2 902 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 SSBP4Q9BWG4 385 aaPredicted RBP6.37□□□□□ -1.39
NPM1-203ENST00000393820 OSBPL5Q9H0X9 879 aaPredicted RBP6.37□□□□□ -1.39
NPM1-203ENST00000393820 VPS33BQ9H267 617 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 GABBR1Q9UBS5 961 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 MAP3K2Q9Y2U5 619 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 MRPS23Q9Y3D9 190 aaKnown RBP6.37□□□□□ -1.39
NPM1-203ENST00000393820 RIPOR2Q9Y4F9 1068 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 PCDHGC5Q9Y5F6 944 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 SCN4AP35499 1836 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 TIAM2Q8IVF5 1701 aa6.37□□□□□ -1.39
NPM1-203ENST00000393820 TCHHQ07283 1943 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 A0A1W2PQU0 124 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 CCDC66A2RUB6 948 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 PRAMEF27A3QJZ7 478 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 DCDC2CA8MYV0 355 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 CHURC1-FNTBB4DL54 471 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 PLD2O14939 933 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 CCP110O43303 1012 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 NRDCO43847 1150 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 PFKFB2O60825 505 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 SLU7O95391 586 aaKnown RBP6.36□□□□□ -1.39
NPM1-203ENST00000393820 PGRP06401 933 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 SLFN14P0C7P3 912 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 HSPA1AP0DMV8 641 aaKnown RBP6.36□□□□□ -1.39
NPM1-203ENST00000393820 HSPA1BP0DMV9 641 aaKnown RBP6.36□□□□□ -1.39
NPM1-203ENST00000393820 DRD2P14416 443 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 RAG1P15918 1043 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 ZNF143P52747 638 aaPredicted RBP6.36□□□□□ -1.39
NPM1-203ENST00000393820 HTRA3P83110 453 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 RING1Q06587 406 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 FNDC3BQ53EP0 1204 aaKnown RBP6.36□□□□□ -1.39
NPM1-203ENST00000393820 ZC3H12AQ5D1E8 599 aaKnown RBP6.36□□□□□ -1.39
NPM1-203ENST00000393820 YOD1Q5VVQ6 348 aaPredicted RBP6.36□□□□□ -1.39
NPM1-203ENST00000393820 FAM173BQ6P4H8 233 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 RAVER1Q8IY67 606 aaKnown RBP6.36□□□□□ -1.39
NPM1-203ENST00000393820 GPC2Q8N158 579 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 AFAP1L2Q8N4X5 818 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 FSD1Q9BTV5 496 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 AKTIPQ9H8T0 292 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 SUSD2Q9UGT4 822 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 MCM8Q9UJA3 840 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 MAPRE3Q9UPY8 281 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 USP16Q9Y5T5 823 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 ARFGEF2Q9Y6D5 1785 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 RIC1Q4ADV7 1423 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 ANKRD31Q8N7Z5 1873 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 PASKQ96RG2 1323 aa6.36□□□□□ -1.39
NPM1-203ENST00000393820 A0A0D9SFI3 127 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 A0A1W2PQ27 194 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 A0A1W2PQ64 194 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 A0A1W2PQD8 194 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 ALG1L2C9J202 215 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 FZD9O00144 591 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 AGRPO00253 132 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 GLB1P16278 677 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms