RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 NOSTRINQ8IVI9 506 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 LRRC71Q8N4P6 559 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 METTL13Q8N6R0 699 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 ZNF579Q8NAF0 562 aaKnown RBP8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 BBXQ8WY36 941 aaPredicted RBP8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 MTIF3Q9H2K0 278 aaKnown RBP8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 NKX2-4Q9H2Z4 354 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 FOXP1Q9H334 677 aaPredicted RBP8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 CDHR5Q9HBB8 845 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 BMP2KQ9NSY1 1161 aaPredicted RBP8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 RGL1Q9NZL6 768 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 SMC3Q9UQE7 1217 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 GINS2Q9Y248 185 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 PCDHA2Q9Y5H9 948 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 EYSQ5T1H1 3165 aa8.63□□□□□ -1.03
HMGB3P1-201ENST00000393368 A0A087WWV3 80 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 SMIM35A0A1B0GVV1 85 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 POTEMA6NI47 508 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 DDX11L8A8MPP1 907 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 ZBTB39O15060 712 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 TBX3O15119 743 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 CAND2O75155 1236 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 VTNP04004 478 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 IBSPP21815 317 aaPredicted RBP8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 CD52P31358 61 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 KCNJ6P48051 423 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 MCM2P49736 904 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 TOB1P50616 345 aaPredicted RBP8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 DRP2Q13474 957 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 CTTNQ14247 550 aaKnown RBP8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 TMEM266Q2M3C6 531 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 PLEKHG4Q58EX7 1191 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 FAM26DQ5JW98 314 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 FBXO47Q5MNV8 452 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 TTC38Q5R3I4 469 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 ZNF697Q5TEC3 545 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 SPRED2Q7Z698 418 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 RSPH3Q86UC2 560 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 KIAA0319LQ8IZA0 1049 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 RDM1Q8NG50 284 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 SEPT8Q92599 483 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 TIFAQ96CG3 184 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 DYDC2Q96IM9 177 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 FAM167AQ96KS9 214 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 FAM20AQ96MK3 541 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 GUCD1Q96NT3 240 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 MTMR9Q96QG7 549 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 NAP1L4Q99733 375 aaKnown RBP8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 LXNQ9BS40 222 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 IFIH1Q9BYX4 1025 aaKnown RBP8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 AGO3Q9H9G7 860 aaKnown RBP8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 MTMR10Q9NXD2 777 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 TRPV2Q9Y5S1 764 aa8.62□□□□□ -1.03
HMGB3P1-201ENST00000393368 COL1A2P08123 1366 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 SIP14410 1827 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 TRIP12Q14669 1992 aaPredicted RBP8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 LCHNA4D1U4 455 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 H3BQV1 296 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 BAIAP3O94812 1187 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 BAG4O95429 457 aaKnown RBP8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 PARNO95453 639 aaKnown RBP8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 CA3P07451 260 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 U2AF2P26368 475 aaKnown RBP eCLIP8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 QARSP47897 775 aaKnown RBP8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 NPEPPSP55786 919 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 PSMC5P62195 406 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 CUL4AQ13619 759 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 IKBKEQ14164 716 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 GRIN2CQ14957 1233 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 KIZQ2M2Z5 673 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 ANO5Q75V66 913 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 RPAINQ86UA6 219 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 HERC6Q8IVU3 1022 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 SLFN12Q8IYM2 578 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 MYOCDQ8IZQ8 938 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 TMEM40Q8WWA1 233 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 LINC01599Q8WXQ3 324 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 TNPO1Q92973 898 aaKnown RBP8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 CEP89Q96ST8 783 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 SLC9A7Q96T83 725 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 OSMRQ99650 979 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 SEMA6BQ9H3T3 888 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 ZNF576Q9H609 170 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 TTC12Q9H892 705 aaPredicted RBP8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 CERS4Q9HA82 394 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 SUGCTQ9HAC7 445 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 NRBP2Q9NSY0 501 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 PCDHA12Q9UN75 941 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 PCDHB6Q9Y5E3 794 aa8.61□□□□□ -1.03
HMGB3P1-201ENST00000393368 COL6A3P12111 3177 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 CHD7Q9P2D1 2997 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 ABHD14A-ACY1A0A1B0GW23 586 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 VPS37CA5D8V6 355 aaPredicted RBP8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 M0QZ92 97 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 SLITRK3O94933 977 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 UPP2O95045 317 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 P4HBP07237 508 aaKnown RBP8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 OR52Z1P0C646 297 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms