RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 POLD4Q9HCU8 107 aa13.48□□□□□ -0.25
RFC5-201ENST00000392542 SIX2Q9NPC8 291 aa13.48□□□□□ -0.25
RFC5-201ENST00000392542 TMX2Q9Y320 296 aa13.48□□□□□ -0.25
RFC5-201ENST00000392542 PSME4Q14997 1843 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 ZMYM2Q9UBW7 1377 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 GTPBP10A4D1E9 387 aaKnown RBP13.47□□□□□ -0.25
RFC5-201ENST00000392542 GCOM1H8Y6P7 765 aaPredicted RBP13.47□□□□□ -0.25
RFC5-201ENST00000392542 TGFB1I1O43294 461 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 SLITRK3O94933 977 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 POLR2MP0CAP2 368 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 KCNA1Q09470 495 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 NFIL3Q16649 462 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 C1orf186Q6ZWK4 172 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 RBM46Q8TBY0 533 aaKnown RBP13.47□□□□□ -0.25
RFC5-201ENST00000392542 ACER1Q8TDN7 264 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 C7orf43Q8WVR3 580 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 CAVIN3Q969G5 261 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 INPP4AQ96PE3 977 aaPredicted RBP13.47□□□□□ -0.25
RFC5-201ENST00000392542 GOPCQ9HD26 462 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 ATP8B3O60423 1300 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 SFI1A8K8P3 1242 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 YDJCA8MPS7 323 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 DNA2P51530 1060 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 PRELPP51888 382 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 JAM2P57087 298 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 TPH2Q8IWU9 490 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 BORCS6Q96GS4 357 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 RANBP17Q9H2T7 1088 aaKnown RBP13.47□□□□□ -0.25
RFC5-201ENST00000392542 TMOD2Q9NZR1 351 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 GCNT4Q9P109 453 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 NAGPAQ9UK23 515 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 NENFQ9UMX5 172 aa13.47□□□□□ -0.25
RFC5-201ENST00000392542 CES2O00748 559 aa13.46□□□□□ -0.25
RFC5-201ENST00000392542 CHMP2AO43633 222 aa13.46□□□□□ -0.25
RFC5-201ENST00000392542 MUTP22033 750 aa13.46□□□□□ -0.25
RFC5-201ENST00000392542 POLD1P28340 1107 aa13.46□□□□□ -0.25
RFC5-201ENST00000392542 NMT1P30419 496 aaKnown RBP13.46□□□□□ -0.25
RFC5-201ENST00000392542 NNTQ13423 1086 aa13.46□□□□□ -0.25
RFC5-201ENST00000392542 IFI16Q16666 785 aaKnown RBP13.46□□□□□ -0.25
RFC5-201ENST00000392542 CCDC174Q6PII3 467 aa13.46□□□□□ -0.25
RFC5-201ENST00000392542 SLC30A10Q6XR72 485 aa13.46□□□□□ -0.25
RFC5-201ENST00000392542 IFT20Q8IY31 132 aa13.46□□□□□ -0.25
RFC5-201ENST00000392542 MYCT1Q8N699 235 aa13.46□□□□□ -0.25
RFC5-201ENST00000392542 SUPT20HQ8NEM7 779 aa13.46□□□□□ -0.25
RFC5-201ENST00000392542 EHMT1Q9H9B1 1298 aa13.46□□□□□ -0.25
RFC5-201ENST00000392542 GDF3Q9NR23 364 aa13.46□□□□□ -0.25
RFC5-201ENST00000392542 AJAP1Q9UKB5 411 aaPredicted RBP13.46□□□□□ -0.25
RFC5-201ENST00000392542 PACSIN2Q9UNF0 486 aaPredicted RBP13.46□□□□□ -0.25
RFC5-201ENST00000392542 PCDHB13Q9Y5F0 798 aa13.46□□□□□ -0.25
RFC5-201ENST00000392542 UBE4BO95155 1302 aa13.46□□□□□ -0.26
RFC5-201ENST00000392542 FRMPD4Q14CM0 1322 aa13.46□□□□□ -0.26
RFC5-201ENST00000392542 TCP10L2B9ZVM9 353 aa13.45□□□□□ -0.26
RFC5-201ENST00000392542 PPIP5K2O43314 1243 aa13.45□□□□□ -0.26
RFC5-201ENST00000392542 FLOT1O75955 427 aa13.45□□□□□ -0.26
RFC5-201ENST00000392542 IVLP07476 585 aa13.45□□□□□ -0.26
RFC5-201ENST00000392542 PSMC2P35998 433 aaKnown RBP13.45□□□□□ -0.26
RFC5-201ENST00000392542 ALKBH5Q6P6C2 394 aaKnown RBP13.45□□□□□ -0.26
RFC5-201ENST00000392542 FAM186BQ8IYM0 893 aa13.45□□□□□ -0.26
RFC5-201ENST00000392542 TAF4BQ92750 862 aa13.45□□□□□ -0.26
RFC5-201ENST00000392542 PARVGQ9HBI0 331 aa13.45□□□□□ -0.26
RFC5-201ENST00000392542 GAS7O60861 476 aa13.45□□□□□ -0.26
RFC5-201ENST00000392542 RPS6KA1Q15418 735 aa13.45□□□□□ -0.26
RFC5-201ENST00000392542 CHURC1Q8WUH1 139 aa13.45□□□□□ -0.26
RFC5-201ENST00000392542 MKNK1Q9BUB5 465 aa13.45□□□□□ -0.26
RFC5-201ENST00000392542 SEL1LQ9UBV2 794 aa13.45□□□□□ -0.26
RFC5-201ENST00000392542 ZBTB21Q9ULJ3 1066 aa13.45□□□□□ -0.26
RFC5-201ENST00000392542 MRPL11Q9Y3B7 192 aaKnown RBP13.45□□□□□ -0.26
RFC5-201ENST00000392542 LOXHD1Q8IVV2 1947 aa13.45□□□□□ -0.26
RFC5-201ENST00000392542 SHTN1A0MZ66 631 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 SPDYE2BA6NHP3 402 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 PPP1R12BO60237 982 aaPredicted RBP13.44□□□□□ -0.26
RFC5-201ENST00000392542 HEXIM1O94992 359 aaKnown RBP13.44□□□□□ -0.26
RFC5-201ENST00000392542 KIF4AO95239 1232 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 SPDYE6P0CI01 402 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 FERP16591 822 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 CEP55Q53EZ4 464 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 VPS36Q86VN1 386 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 USP38Q8NB14 1042 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 TSEN2Q8NCE0 465 aaKnown RBP13.44□□□□□ -0.26
RFC5-201ENST00000392542 FAM151AQ8WW52 585 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 FIZ1Q96SL8 496 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 SH3GL2Q99962 352 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 GOLGA8KD6RF30 607 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 ZBTB39O15060 712 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 GLI1P08151 1106 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 VIL1P09327 827 aaKnown RBP13.44□□□□□ -0.26
RFC5-201ENST00000392542 ZNF131P52739 623 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 UBXN2AP68543 259 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 ZC2HC1CQ53FD0 456 aaPredicted RBP13.44□□□□□ -0.26
RFC5-201ENST00000392542 ALS2CLQ60I27 953 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 GJB7Q6PEY0 223 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 LRRC57Q8N9N7 239 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 FAM76AQ8TAV0 307 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 NACC1Q96RE7 527 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 KRT12Q99456 494 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 WDR11Q9BZH6 1224 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 IKZF4Q9H2S9 585 aa13.44□□□□□ -0.26
RFC5-201ENST00000392542 MYH11P35749 1972 aa13.43□□□□□ -0.26
RFC5-201ENST00000392542 CLRN2A0PK11 232 aa13.43□□□□□ -0.26
RFC5-201ENST00000392542 GOLGA6CA6NDK9 693 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms