RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 PCDH10Q9P2E7 1040 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 CFAP45Q9UL16 551 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 PCDHA2Q9Y5H9 948 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 SRPRBQ9Y5M8 271 aaKnown RBP7.58□□□□□ -1.2
UBBP1-201ENST00000392399 SMIM35A0A1B0GVV1 85 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 TRIM43BA6NCK2 446 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 DDX11L8A8MPP1 907 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 TREHO43280 583 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 YEATS4O95619 227 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 KLRC1P26715 233 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 TMOD1P28289 359 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 LONP1P36776 959 aaKnown RBP7.57□□□□□ -1.2
UBBP1-201ENST00000392399 NASPP49321 788 aaPredicted RBP7.57□□□□□ -1.2
UBBP1-201ENST00000392399 CDC42EP1Q00587 391 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 PRKCEQ02156 737 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 PTPAQ15257 358 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 TARBP2Q15633 366 aaKnown RBP7.57□□□□□ -1.2
UBBP1-201ENST00000392399 MARCH8Q5T0T0 291 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 MFSD5Q6N075 450 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 CATSPER3Q86XQ3 398 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 TPH2Q8IWU9 490 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 TMEM199Q8N511 208 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 BANK1Q8NDB2 785 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 LMBR1Q8WVP7 490 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 TRIM43Q96BQ3 446 aaPredicted RBP7.57□□□□□ -1.2
UBBP1-201ENST00000392399 DYDC2Q96IM9 177 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 NACC1Q96RE7 527 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 USP28Q96RU2 1077 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 LXNQ9BS40 222 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 NOC4LQ9BVI4 516 aaKnown RBP7.57□□□□□ -1.2
UBBP1-201ENST00000392399 NT5C3AQ9H0P0 336 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 HIPK3Q9H422 1215 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 PRDM5Q9NQX1 630 aaPredicted RBP7.57□□□□□ -1.2
UBBP1-201ENST00000392399 ANKEF1Q9NU02 776 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.57□□□□□ -1.2
UBBP1-201ENST00000392399 RGL1Q9NZL6 768 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 TUBE1Q9UJT0 475 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 CLIC4Q9Y696 253 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 DOCK5Q9H7D0 1870 aa7.57□□□□□ -1.2
UBBP1-201ENST00000392399 KAT6AQ92794 2004 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 VWA3AA6NCI4 1184 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 H0YGN5 161 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 GAS2O43903 313 aaKnown RBP7.56□□□□□ -1.2
UBBP1-201ENST00000392399 PPP6R2O75170 966 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 STBD1O95210 358 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 PFKMP08237 780 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 SPATA31C1P0DKV0 1188 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 CYP2C9P11712 490 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 CKBP12277 381 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 YWHABP31946 246 aaKnown RBP7.56□□□□□ -1.2
UBBP1-201ENST00000392399 BMP8BP34820 402 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 RFC2P35250 354 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 DDIT3P35638 169 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 RFC5P40937 340 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 UBA7P41226 1012 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 DNM2P50570 870 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 IGBP1P78318 339 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 ZNF200P98182 395 aaPredicted RBP7.56□□□□□ -1.2
UBBP1-201ENST00000392399 CYP4A11Q02928 519 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 TBC1D8BQ0IIM8 1120 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 PKP1Q13835 747 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 CTTNQ14247 550 aaKnown RBP7.56□□□□□ -1.2
UBBP1-201ENST00000392399 HIC1Q14526 733 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 IL17AQ16552 155 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 UGCGQ16739 394 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 HYIQ5T013 277 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 PRPF38BQ5VTL8 546 aaKnown RBP7.56□□□□□ -1.2
UBBP1-201ENST00000392399 IER5Q5VY09 327 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 FAM173BQ6P4H8 233 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 MTHFD1LQ6UB35 978 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 ANO5Q75V66 913 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 SH3RF1Q7Z6J0 888 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 RPUSD2Q8IZ73 545 aaKnown RBP7.56□□□□□ -1.2
UBBP1-201ENST00000392399 LINC00301Q8NCQ3 95 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 KCNG4Q8TDN1 519 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 SNX29Q8TEQ0 813 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 CEP170P1Q96L14 293 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 CTAGE1Q96RT6 745 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 CYP26B1Q9NR63 512 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 SEPT9Q9UHD8 586 aaPredicted RBP7.56□□□□□ -1.2
UBBP1-201ENST00000392399 DBR1Q9UK59 544 aaKnown RBP7.56□□□□□ -1.2
UBBP1-201ENST00000392399 RCOR1Q9UKL0 485 aa7.56□□□□□ -1.2
UBBP1-201ENST00000392399 ZMYND8Q9ULU4 1186 aaPredicted RBP7.56□□□□□ -1.2
UBBP1-201ENST00000392399 KDM3AQ9Y4C1 1321 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 MYH9P35579 1960 aaKnown RBP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 RANBP2P49792 3224 aaKnown RBP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 IGKV6-21A0A0C4DH24 114 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 RSPH10B2B2RC85 870 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 ZBTB42B2RXF5 422 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 M0QZ92 97 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 SPTLC2O15270 562 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 MAFO75444 373 aaPredicted RBP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 MED24O75448 989 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 C22orf31O95567 290 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 IQCF3P0C7M6 154 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 RSPH10BP0C881 870 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 SELPP16109 830 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 SYN1P17600 705 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 THPOP40225 353 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 CCT6AP40227 531 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms